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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:29:49 UTC
Update Date2022-03-07 02:52:08 UTC
HMDB IDHMDB0029342
Secondary Accession Numbers
  • HMDB29342
Metabolite Identification
Common NameCeanothine E
DescriptionCeanothine E belongs to the class of organic compounds known as oligopeptides. These are organic compounds containing a sequence of between three and ten alpha-amino acids joined by peptide bonds. Based on a literature review very few articles have been published on Ceanothine E.
Structure
Data?1582753405
Synonyms
ValueSource
a-(Dimethylamino)-N-[7-(2-methylpropyl)-5,8-dioxo-3-phenyl-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-10,12,14,15-tetraen-4-yl]benzenepropanamide, 9ciHMDB
N-[(10Z)-5,8-Dihydroxy-7-(2-methylpropyl)-3-phenyl-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(dimethylamino)-3-phenylpropanimidateHMDB
Chemical FormulaC34H40N4O4
Average Molecular Weight568.7058
Monoisotopic Molecular Weight568.304955788
IUPAC Name(Z)-N-[(5E,8E,10Z)-5,8-dihydroxy-7-(2-methylpropyl)-3-phenyl-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(dimethylamino)-3-phenylpropimidic acid
Traditional Name(Z)-N-[(5E,8E,10Z)-5,8-dihydroxy-7-(2-methylpropyl)-3-phenyl-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(dimethylamino)-3-phenylpropimidic acid
CAS Registry Number23926-98-9
SMILES
CC(C)CC1\N=C(O)/C(\N=C(/O)C(CC2=CC=CC=C2)N(C)C)C(OC2=CC=C(C=C2)\C=C/N=C1/O)C1=CC=CC=C1
InChI Identifier
InChI=1S/C34H40N4O4/c1-23(2)21-28-32(39)35-20-19-24-15-17-27(18-16-24)42-31(26-13-9-6-10-14-26)30(34(41)36-28)37-33(40)29(38(3)4)22-25-11-7-5-8-12-25/h5-20,23,28-31H,21-22H2,1-4H3,(H,35,39)(H,36,41)(H,37,40)/b20-19-
InChI KeyKCFAADIKGBVBFW-VXPUYCOJSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as oligopeptides. These are organic compounds containing a sequence of between three and ten alpha-amino acids joined by peptide bonds.
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassCarboxylic acids and derivatives
Sub ClassAmino acids, peptides, and analogues
Direct ParentOligopeptides
Alternative Parents
Substituents
  • Alpha-oligopeptide
  • Cyclic alpha peptide
  • Phenylalanine or derivatives
  • Macrolactam
  • N-acyl-alpha amino acid or derivatives
  • Alpha-amino acid amide
  • Alpha-amino acid or derivatives
  • Amphetamine or derivatives
  • Alkyl aryl ether
  • Aralkylamine
  • Fatty amide
  • Fatty acyl
  • Benzenoid
  • Monocyclic benzene moiety
  • Amino acid or derivatives
  • Lactam
  • Carboxamide group
  • Tertiary aliphatic amine
  • Tertiary amine
  • Secondary carboxylic acid amide
  • Oxacycle
  • Ether
  • Azacycle
  • Organoheterocyclic compound
  • Organic nitrogen compound
  • Organonitrogen compound
  • Carbonyl group
  • Organooxygen compound
  • Hydrocarbon derivative
  • Organic oxide
  • Amine
  • Organopnictogen compound
  • Organic oxygen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point238 - 239 °CNot Available
Boiling PointNot AvailableNot Available
Water Solubility0.03 mg/L @ 25 °C (est)The Good Scents Company Information System
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.0016 g/LALOGPS
logP4.69ALOGPS
logP4.01ChemAxon
logS-5.5ALOGPS
pKa (Strongest Acidic)3.67ChemAxon
pKa (Strongest Basic)8.56ChemAxon
Physiological Charge-2ChemAxon
Hydrogen Acceptor Count8ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area110.24 ŲChemAxon
Rotatable Bond Count8ChemAxon
Refractivity165.23 m³·mol⁻¹ChemAxon
Polarizability61.6 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+235.96730932474
DeepCCS[M-H]-234.14230932474
DeepCCS[M-2H]-267.38430932474
DeepCCS[M+Na]+241.57330932474
AllCCS[M+H]+243.832859911
AllCCS[M+H-H2O]+242.432859911
AllCCS[M+NH4]+245.132859911
AllCCS[M+Na]+245.532859911
AllCCS[M-H]-231.232859911
AllCCS[M+Na-2H]-232.932859911
AllCCS[M+HCOO]-235.032859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Ceanothine ECC(C)CC1\N=C(O)/C(\N=C(/O)C(CC2=CC=CC=C2)N(C)C)C(OC2=CC=C(C=C2)\C=C/N=C1/O)C1=CC=CC=C15307.3Standard polar33892256
Ceanothine ECC(C)CC1\N=C(O)/C(\N=C(/O)C(CC2=CC=CC=C2)N(C)C)C(OC2=CC=C(C=C2)\C=C/N=C1/O)C1=CC=CC=C14289.6Standard non polar33892256
Ceanothine ECC(C)CC1\N=C(O)/C(\N=C(/O)C(CC2=CC=CC=C2)N(C)C)C(OC2=CC=C(C=C2)\C=C/N=C1/O)C1=CC=CC=C14288.5Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Ceanothine E,1TMS,isomer #1CC(C)CC1/N=C(/O[Si](C)(C)C)C(/N=C(\O)C(CC2=CC=CC=C2)N(C)C)C(C2=CC=CC=C2)OC2=CC=C(/C=C\N=C/1O)C=C24189.1Semi standard non polar33892256
Ceanothine E,1TMS,isomer #2CC(C)CC1/N=C(/O)C(/N=C(\O[Si](C)(C)C)C(CC2=CC=CC=C2)N(C)C)C(C2=CC=CC=C2)OC2=CC=C(/C=C\N=C/1O)C=C24188.5Semi standard non polar33892256
Ceanothine E,1TMS,isomer #3CC(C)CC1/N=C(/O)C(/N=C(\O)C(CC2=CC=CC=C2)N(C)C)C(C2=CC=CC=C2)OC2=CC=C(/C=C\N=C/1O[Si](C)(C)C)C=C24207.7Semi standard non polar33892256
Ceanothine E,2TMS,isomer #1CC(C)CC1/N=C(/O[Si](C)(C)C)C(/N=C(\O[Si](C)(C)C)C(CC2=CC=CC=C2)N(C)C)C(C2=CC=CC=C2)OC2=CC=C(/C=C\N=C/1O)C=C24049.5Semi standard non polar33892256
Ceanothine E,2TMS,isomer #2CC(C)CC1/N=C(/O[Si](C)(C)C)C(/N=C(\O)C(CC2=CC=CC=C2)N(C)C)C(C2=CC=CC=C2)OC2=CC=C(/C=C\N=C/1O[Si](C)(C)C)C=C24102.0Semi standard non polar33892256
Ceanothine E,2TMS,isomer #3CC(C)CC1/N=C(/O)C(/N=C(\O[Si](C)(C)C)C(CC2=CC=CC=C2)N(C)C)C(C2=CC=CC=C2)OC2=CC=C(/C=C\N=C/1O[Si](C)(C)C)C=C24067.2Semi standard non polar33892256
Ceanothine E,3TMS,isomer #1CC(C)CC1/N=C(/O[Si](C)(C)C)C(/N=C(\O[Si](C)(C)C)C(CC2=CC=CC=C2)N(C)C)C(C2=CC=CC=C2)OC2=CC=C(/C=C\N=C/1O[Si](C)(C)C)C=C24012.0Semi standard non polar33892256
Ceanothine E,1TBDMS,isomer #1CC(C)CC1/N=C(/O[Si](C)(C)C(C)(C)C)C(/N=C(\O)C(CC2=CC=CC=C2)N(C)C)C(C2=CC=CC=C2)OC2=CC=C(/C=C\N=C/1O)C=C24376.0Semi standard non polar33892256
Ceanothine E,1TBDMS,isomer #2CC(C)CC1/N=C(/O)C(/N=C(\O[Si](C)(C)C(C)(C)C)C(CC2=CC=CC=C2)N(C)C)C(C2=CC=CC=C2)OC2=CC=C(/C=C\N=C/1O)C=C24368.5Semi standard non polar33892256
Ceanothine E,1TBDMS,isomer #3CC(C)CC1/N=C(/O)C(/N=C(\O)C(CC2=CC=CC=C2)N(C)C)C(C2=CC=CC=C2)OC2=CC=C(/C=C\N=C/1O[Si](C)(C)C(C)(C)C)C=C24388.0Semi standard non polar33892256
Ceanothine E,2TBDMS,isomer #1CC(C)CC1/N=C(/O[Si](C)(C)C(C)(C)C)C(/N=C(\O[Si](C)(C)C(C)(C)C)C(CC2=CC=CC=C2)N(C)C)C(C2=CC=CC=C2)OC2=CC=C(/C=C\N=C/1O)C=C24401.2Semi standard non polar33892256
Ceanothine E,2TBDMS,isomer #2CC(C)CC1/N=C(/O[Si](C)(C)C(C)(C)C)C(/N=C(\O)C(CC2=CC=CC=C2)N(C)C)C(C2=CC=CC=C2)OC2=CC=C(/C=C\N=C/1O[Si](C)(C)C(C)(C)C)C=C24437.2Semi standard non polar33892256
Ceanothine E,2TBDMS,isomer #3CC(C)CC1/N=C(/O)C(/N=C(\O[Si](C)(C)C(C)(C)C)C(CC2=CC=CC=C2)N(C)C)C(C2=CC=CC=C2)OC2=CC=C(/C=C\N=C/1O[Si](C)(C)C(C)(C)C)C=C24404.9Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Ceanothine E GC-MS (Non-derivatized) - 70eV, Positivesplash10-0002-2900000000-8e6cdce117b4526bd7ad2017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ceanothine E GC-MS (1 TMS) - 70eV, Positivesplash10-0002-2900000000-87f483a8834873c4d5002017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ceanothine E GC-MS ("Ceanothine E,1TMS,#1" TMS) - 70eV, PositiveNot Available2021-10-14Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ceanothine E GC-MS (TMS_1_2) - 70eV, PositiveNot Available2021-10-15Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ceanothine E GC-MS (TMS_1_3) - 70eV, PositiveNot Available2021-10-15Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ceanothine E GC-MS (TMS_2_1) - 70eV, PositiveNot Available2021-10-15Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ceanothine E GC-MS (TMS_2_2) - 70eV, PositiveNot Available2021-10-15Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ceanothine E GC-MS (TMS_2_3) - 70eV, PositiveNot Available2021-10-15Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ceanothine E GC-MS (TMS_3_1) - 70eV, PositiveNot Available2021-10-15Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ceanothine E GC-MS (TBDMS_1_1) - 70eV, PositiveNot Available2021-10-15Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ceanothine E GC-MS (TBDMS_1_2) - 70eV, PositiveNot Available2021-10-15Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ceanothine E GC-MS (TBDMS_1_3) - 70eV, PositiveNot Available2021-10-15Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ceanothine E GC-MS (TBDMS_2_1) - 70eV, PositiveNot Available2021-10-15Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ceanothine E GC-MS (TBDMS_2_2) - 70eV, PositiveNot Available2021-10-15Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ceanothine E GC-MS (TBDMS_2_3) - 70eV, PositiveNot Available2021-10-15Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ceanothine E 10V, Positive-QTOFsplash10-014l-0307090000-6402467fbfd9821b29ff2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ceanothine E 20V, Positive-QTOFsplash10-0005-0906000000-c5d44be79c385242bac22016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ceanothine E 40V, Positive-QTOFsplash10-0pka-6903000000-23fab7f62e7ec769e14b2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ceanothine E 10V, Negative-QTOFsplash10-014i-0101090000-a9e345593bb8b8247e122016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ceanothine E 20V, Negative-QTOFsplash10-05tf-1405090000-1bc86a17a05228a17cea2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ceanothine E 40V, Negative-QTOFsplash10-000x-5509200000-7af0b4ff0eebda30b00f2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ceanothine E 10V, Positive-QTOFsplash10-014i-0000090000-f9abb05dca2b272de2742021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ceanothine E 20V, Positive-QTOFsplash10-014l-2403290000-7a940754e2a9fc0d5f612021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ceanothine E 40V, Positive-QTOFsplash10-002o-9805110000-f6ea88e07ec591e5f1012021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ceanothine E 10V, Negative-QTOFsplash10-014i-0000090000-c9d08b2fc36f0c85b5072021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ceanothine E 20V, Negative-QTOFsplash10-0006-0209120000-12691cdec4f1f81481e52021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ceanothine E 40V, Negative-QTOFsplash10-00lr-2609500000-3ec778cf412f2f17c8372021-09-25Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB000403
KNApSAcK IDC00055255
Chemspider ID4523141
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound16058115
PDB IDNot Available
ChEBI ID176071
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1808561
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .