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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:30:01 UTC
Update Date2022-03-07 02:52:08 UTC
HMDB IDHMDB0029372
Secondary Accession Numbers
  • HMDB29372
Metabolite Identification
Common Name2'-Hydroxydaidzein
Description2'-Hydroxydaidzein belongs to the class of organic compounds known as isoflavones. These are polycyclic compounds containing a 2-isoflavene skeleton which bears a ketone group at the C4 carbon atom. Thus, 2'-hydroxydaidzein is considered to be a flavonoid. 2'-Hydroxydaidzein has been detected, but not quantified in, several different foods, such as saffrons (Crocus sativus), celery stalks (Apium graveolens var. dulce), lemon grasses (Cymbopogon citratus), purslanes (Portulaca oleracea), and mugworts (Artemisia vulgaris). This could make 2'-hydroxydaidzein a potential biomarker for the consumption of these foods. 2'-Hydroxydaidzein is a primary metabolite. Primary metabolites are metabolically or physiologically essential metabolites. They are directly involved in an organism’s growth, development or reproduction. Based on a literature review a small amount of articles have been published on 2'-Hydroxydaidzein.
Structure
Data?1582753410
Synonyms
ValueSource
2',4',7-TrihydroxyisoflavoneChEBI
3-(2,4-Dihydroxyphenyl)-7-hydroxy-4H-1-benzopyran-4-oneChEBI
3-(2,4-Dihydroxyphenyl)-7-hydroxychromen-4-oneKegg
3-(2,4-Dihydroxyphenyl)-7-hydroxy-4H-1-benzopyran-4-one, 9ciHMDB
3-(2,4-Dihydroxyphenyl)-7-hydroxy-4H-chromen-4-oneHMDB
7,2',4'-TrihydroxyisoflavoneHMDB
2',4',7-THIFMeSH, HMDB
Chemical FormulaC15H10O5
Average Molecular Weight270.2369
Monoisotopic Molecular Weight270.05282343
IUPAC Name3-(2,4-dihydroxyphenyl)-7-hydroxy-4H-chromen-4-one
Traditional Name2'-hydroxydaidzein
CAS Registry Number7678-85-5
SMILES
OC1=CC(O)=C(C=C1)C1=COC2=C(C=CC(O)=C2)C1=O
InChI Identifier
InChI=1S/C15H10O5/c16-8-1-3-10(13(18)5-8)12-7-20-14-6-9(17)2-4-11(14)15(12)19/h1-7,16-18H
InChI KeyZCTNPCRBEWXCGP-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as isoflavones. These are polycyclic compounds containing a 2-isoflavene skeleton which bears a ketone group at the C4 carbon atom.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassIsoflavonoids
Sub ClassIsoflav-2-enes
Direct ParentIsoflavones
Alternative Parents
Substituents
  • Hydroxyisoflavonoid
  • Isoflavone
  • Chromone
  • Benzopyran
  • 1-benzopyran
  • Resorcinol
  • 1-hydroxy-4-unsubstituted benzenoid
  • 1-hydroxy-2-unsubstituted benzenoid
  • Pyranone
  • Phenol
  • Monocyclic benzene moiety
  • Benzenoid
  • Pyran
  • Heteroaromatic compound
  • Oxacycle
  • Organoheterocyclic compound
  • Organic oxygen compound
  • Organooxygen compound
  • Hydrocarbon derivative
  • Organic oxide
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External Descriptors
Ontology
Physiological effectNot Available
Disposition
Biological locationRoute of exposureSource
ProcessNot Available
RoleNot Available
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point275 °CNot Available
Boiling PointNot AvailableNot Available
Water Solubility1188 mg/L @ 25 °C (est)The Good Scents Company Information System
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.12 g/LALOGPS
logP3ALOGPS
logP2.43ChemAxon
logS-3.4ALOGPS
pKa (Strongest Acidic)6.47ChemAxon
pKa (Strongest Basic)-5.3ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count5ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area86.99 ŲChemAxon
Rotatable Bond Count1ChemAxon
Refractivity71.68 m³·mol⁻¹ChemAxon
Polarizability26.55 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+163.04631661259
DarkChem[M-H]-162.42331661259
DeepCCS[M+H]+164.31530932474
DeepCCS[M-H]-161.95730932474
DeepCCS[M-2H]-194.84430932474
DeepCCS[M+Na]+170.40930932474
AllCCS[M+H]+161.032859911
AllCCS[M+H-H2O]+157.132859911
AllCCS[M+NH4]+164.632859911
AllCCS[M+Na]+165.632859911
AllCCS[M-H]-161.532859911
AllCCS[M+Na-2H]-160.732859911
AllCCS[M+HCOO]-160.032859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
2'-HydroxydaidzeinOC1=CC(O)=C(C=C1)C1=COC2=C(C=CC(O)=C2)C1=O4194.3Standard polar33892256
2'-HydroxydaidzeinOC1=CC(O)=C(C=C1)C1=COC2=C(C=CC(O)=C2)C1=O2645.6Standard non polar33892256
2'-HydroxydaidzeinOC1=CC(O)=C(C=C1)C1=COC2=C(C=CC(O)=C2)C1=O3047.8Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
2'-Hydroxydaidzein,1TMS,isomer #1C[Si](C)(C)OC1=CC=C(C2=COC3=CC(O)=CC=C3C2=O)C(O)=C12959.5Semi standard non polar33892256
2'-Hydroxydaidzein,1TMS,isomer #2C[Si](C)(C)OC1=CC(O)=CC=C1C1=COC2=CC(O)=CC=C2C1=O2915.4Semi standard non polar33892256
2'-Hydroxydaidzein,1TMS,isomer #3C[Si](C)(C)OC1=CC=C2C(=O)C(C3=CC=C(O)C=C3O)=COC2=C12997.4Semi standard non polar33892256
2'-Hydroxydaidzein,2TMS,isomer #1C[Si](C)(C)OC1=CC=C(C2=COC3=CC(O[Si](C)(C)C)=CC=C3C2=O)C(O)=C12849.3Semi standard non polar33892256
2'-Hydroxydaidzein,2TMS,isomer #2C[Si](C)(C)OC1=CC=C(C2=COC3=CC(O)=CC=C3C2=O)C(O[Si](C)(C)C)=C12859.3Semi standard non polar33892256
2'-Hydroxydaidzein,2TMS,isomer #3C[Si](C)(C)OC1=CC=C2C(=O)C(C3=CC=C(O)C=C3O[Si](C)(C)C)=COC2=C12847.9Semi standard non polar33892256
2'-Hydroxydaidzein,3TMS,isomer #1C[Si](C)(C)OC1=CC=C(C2=COC3=CC(O[Si](C)(C)C)=CC=C3C2=O)C(O[Si](C)(C)C)=C12791.0Semi standard non polar33892256
2'-Hydroxydaidzein,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC1=CC=C(C2=COC3=CC(O)=CC=C3C2=O)C(O)=C13220.8Semi standard non polar33892256
2'-Hydroxydaidzein,1TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC1=CC(O)=CC=C1C1=COC2=CC(O)=CC=C2C1=O3186.4Semi standard non polar33892256
2'-Hydroxydaidzein,1TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC1=CC=C2C(=O)C(C3=CC=C(O)C=C3O)=COC2=C13241.7Semi standard non polar33892256
2'-Hydroxydaidzein,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC1=CC=C(C2=COC3=CC(O[Si](C)(C)C(C)(C)C)=CC=C3C2=O)C(O)=C13403.7Semi standard non polar33892256
2'-Hydroxydaidzein,2TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC1=CC=C(C2=COC3=CC(O)=CC=C3C2=O)C(O[Si](C)(C)C(C)(C)C)=C13367.0Semi standard non polar33892256
2'-Hydroxydaidzein,2TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC1=CC=C2C(=O)C(C3=CC=C(O)C=C3O[Si](C)(C)C(C)(C)C)=COC2=C13379.0Semi standard non polar33892256
2'-Hydroxydaidzein,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC1=CC=C(C2=COC3=CC(O[Si](C)(C)C(C)(C)C)=CC=C3C2=O)C(O[Si](C)(C)C(C)(C)C)=C13521.8Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - 2'-Hydroxydaidzein GC-MS (Non-derivatized) - 70eV, Positivesplash10-0006-0390000000-a69a61f0c28cfc77fc0d2017-07-27Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 2'-Hydroxydaidzein GC-MS (3 TMS) - 70eV, Positivesplash10-00di-3323900000-d75d9fff66457d20c1d72017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 2'-Hydroxydaidzein GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 2'-Hydroxydaidzein GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2'-Hydroxydaidzein 10V, Positive-QTOFsplash10-00di-0090000000-cc88b59834f822cb223a2015-05-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2'-Hydroxydaidzein 20V, Positive-QTOFsplash10-00di-0090000000-6a639c80709bf971ff912015-05-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2'-Hydroxydaidzein 40V, Positive-QTOFsplash10-0f79-5970000000-1642d00d54ce7bfb88ba2015-05-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2'-Hydroxydaidzein 10V, Negative-QTOFsplash10-014i-0090000000-29e3069cfce08c6b9bf12015-05-27Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2'-Hydroxydaidzein 20V, Negative-QTOFsplash10-014i-0090000000-c19af9a6981284c6817c2015-05-27Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2'-Hydroxydaidzein 40V, Negative-QTOFsplash10-014r-5950000000-bcdb864e1925ff1ff08a2015-05-27Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2'-Hydroxydaidzein 10V, Negative-QTOFsplash10-014i-0090000000-4e65ba44fc45f7e80f5a2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2'-Hydroxydaidzein 20V, Negative-QTOFsplash10-014i-0090000000-1e651de087453457c4fc2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2'-Hydroxydaidzein 40V, Negative-QTOFsplash10-002e-1970000000-cabd062f1230903154582021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2'-Hydroxydaidzein 10V, Positive-QTOFsplash10-00di-0090000000-ae6e5e86465295cd03322021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2'-Hydroxydaidzein 20V, Positive-QTOFsplash10-00di-0090000000-ae6e5e86465295cd03322021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2'-Hydroxydaidzein 40V, Positive-QTOFsplash10-004m-1970000000-ae2c810924d7bcf71f602021-09-25Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB000442
KNApSAcK IDC00009383
Chemspider ID4444153
KEGG Compound IDC02495
BioCyc ID2-HYDROXYDAIDZEIN
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound5280520
PDB IDNot Available
ChEBI ID27479
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1485721
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .