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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:35:25 UTC
Update Date2022-03-07 02:52:28 UTC
HMDB IDHMDB0030200
Secondary Accession Numbers
  • HMDB30200
Metabolite Identification
Common NameHovenine A
DescriptionHovenine A belongs to the class of organic compounds known as oligopeptides. These are organic compounds containing a sequence of between three and ten alpha-amino acids joined by peptide bonds. Based on a literature review a significant number of articles have been published on Hovenine A.
Structure
Data?1563861952
Synonyms
ValueSource
N-DemethylfrangulanineHMDB
N-[(10Z)-5,8-Dihydroxy-7-(2-methylpropyl)-3-(propan-2-yl)-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-3-methyl-2-(methylamino)pentanimidateHMDB
Chemical FormulaC27H42N4O4
Average Molecular Weight486.6468
Monoisotopic Molecular Weight486.320605852
IUPAC Name(Z)-N-[(5E,8E,10Z)-5,8-dihydroxy-7-(2-methylpropyl)-3-(propan-2-yl)-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-3-methyl-2-(methylamino)pentimidic acid
Traditional Name(Z)-N-[(5E,8E,10Z)-5,8-dihydroxy-3-isopropyl-7-(2-methylpropyl)-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-3-methyl-2-(methylamino)pentimidic acid
CAS Registry Number52309-78-1
SMILES
CCC(C)C(NC)C(\O)=N\C1C(OC2=CC=C(C=C2)\C=C/N=C(O)\C(CC(C)C)\N=C1\O)C(C)C
InChI Identifier
InChI=1S/C27H42N4O4/c1-8-18(6)22(28-7)26(33)31-23-24(17(4)5)35-20-11-9-19(10-12-20)13-14-29-25(32)21(15-16(2)3)30-27(23)34/h9-14,16-18,21-24,28H,8,15H2,1-7H3,(H,29,32)(H,30,34)(H,31,33)/b14-13-
InChI KeyARFZEJYVBXGWDN-YPKPFQOOSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as oligopeptides. These are organic compounds containing a sequence of between three and ten alpha-amino acids joined by peptide bonds.
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassCarboxylic acids and derivatives
Sub ClassAmino acids, peptides, and analogues
Direct ParentOligopeptides
Alternative Parents
Substituents
  • Alpha-oligopeptide
  • Cyclic alpha peptide
  • Isoleucine or derivatives
  • Macrolactam
  • N-acyl-alpha amino acid or derivatives
  • Alpha-amino acid amide
  • N-substituted-alpha-amino acid
  • Alpha-amino acid or derivatives
  • Alkyl aryl ether
  • Fatty amide
  • Fatty acyl
  • N-acyl-amine
  • Benzenoid
  • Amino acid or derivatives
  • Carboxamide group
  • Lactam
  • Secondary carboxylic acid amide
  • Organoheterocyclic compound
  • Azacycle
  • Oxacycle
  • Ether
  • Secondary aliphatic amine
  • Secondary amine
  • Organopnictogen compound
  • Hydrocarbon derivative
  • Organic oxygen compound
  • Carbonyl group
  • Organic nitrogen compound
  • Amine
  • Organic oxide
  • Organonitrogen compound
  • Organooxygen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point215 °CNot Available
Boiling PointNot AvailableNot Available
Water Solubility6.63 mg/L @ 25 °C (est)The Good Scents Company Information System
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.0053 g/LALOGPS
logP3.35ALOGPS
logP2.66ChemAxon
logS-5ALOGPS
pKa (Strongest Acidic)3.84ChemAxon
pKa (Strongest Basic)9.15ChemAxon
Physiological Charge-2ChemAxon
Hydrogen Acceptor Count8ChemAxon
Hydrogen Donor Count4ChemAxon
Polar Surface Area119.03 ŲChemAxon
Rotatable Bond Count8ChemAxon
Refractivity138.04 m³·mol⁻¹ChemAxon
Polarizability52.95 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+222.05330932474
DeepCCS[M-H]-219.65830932474
DeepCCS[M-2H]-252.54230932474
DeepCCS[M+Na]+227.96630932474
AllCCS[M+H]+224.432859911
AllCCS[M+H-H2O]+222.732859911
AllCCS[M+NH4]+225.932859911
AllCCS[M+Na]+226.332859911
AllCCS[M-H]-211.032859911
AllCCS[M+Na-2H]-213.032859911
AllCCS[M+HCOO]-215.332859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Hovenine ACCC(C)C(NC)C(\O)=N\C1C(OC2=CC=C(C=C2)\C=C/N=C(O)\C(CC(C)C)\N=C1\O)C(C)C4281.2Standard polar33892256
Hovenine ACCC(C)C(NC)C(\O)=N\C1C(OC2=CC=C(C=C2)\C=C/N=C(O)\C(CC(C)C)\N=C1\O)C(C)C3522.9Standard non polar33892256
Hovenine ACCC(C)C(NC)C(\O)=N\C1C(OC2=CC=C(C=C2)\C=C/N=C(O)\C(CC(C)C)\N=C1\O)C(C)C3435.6Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Hovenine A,1TMS,isomer #1CCC(C)C(NC)/C(=N/C1/C(O)=N\C(CC(C)C)/C(O)=N\C=C/C2=CC=C(C=C2)OC1C(C)C)O[Si](C)(C)C3378.4Semi standard non polar33892256
Hovenine A,1TMS,isomer #2CCC(C)C(NC)/C(O)=N/C1/C(O)=N\C(CC(C)C)/C(O[Si](C)(C)C)=N\C=C/C2=CC=C(C=C2)OC1C(C)C3446.8Semi standard non polar33892256
Hovenine A,1TMS,isomer #3CCC(C)C(NC)/C(O)=N/C1/C(O[Si](C)(C)C)=N\C(CC(C)C)/C(O)=N\C=C/C2=CC=C(C=C2)OC1C(C)C3414.0Semi standard non polar33892256
Hovenine A,1TMS,isomer #4CCC(C)C(/C(O)=N/C1/C(O)=N\C(CC(C)C)/C(O)=N\C=C/C2=CC=C(C=C2)OC1C(C)C)N(C)[Si](C)(C)C3511.1Semi standard non polar33892256
Hovenine A,2TMS,isomer #1CCC(C)C(NC)/C(=N/C1/C(O[Si](C)(C)C)=N\C(CC(C)C)/C(O)=N\C=C/C2=CC=C(C=C2)OC1C(C)C)O[Si](C)(C)C3282.3Semi standard non polar33892256
Hovenine A,2TMS,isomer #2CCC(C)C(NC)/C(=N/C1/C(O)=N\C(CC(C)C)/C(O[Si](C)(C)C)=N\C=C/C2=CC=C(C=C2)OC1C(C)C)O[Si](C)(C)C3305.8Semi standard non polar33892256
Hovenine A,2TMS,isomer #3CCC(C)C(/C(=N/C1/C(O)=N\C(CC(C)C)/C(O)=N\C=C/C2=CC=C(C=C2)OC1C(C)C)O[Si](C)(C)C)N(C)[Si](C)(C)C3410.5Semi standard non polar33892256
Hovenine A,2TMS,isomer #4CCC(C)C(NC)/C(O)=N/C1/C(O[Si](C)(C)C)=N\C(CC(C)C)/C(O[Si](C)(C)C)=N\C=C/C2=CC=C(C=C2)OC1C(C)C3336.8Semi standard non polar33892256
Hovenine A,2TMS,isomer #5CCC(C)C(/C(O)=N/C1/C(O)=N\C(CC(C)C)/C(O[Si](C)(C)C)=N\C=C/C2=CC=C(C=C2)OC1C(C)C)N(C)[Si](C)(C)C3446.3Semi standard non polar33892256
Hovenine A,2TMS,isomer #6CCC(C)C(/C(O)=N/C1/C(O[Si](C)(C)C)=N\C(CC(C)C)/C(O)=N\C=C/C2=CC=C(C=C2)OC1C(C)C)N(C)[Si](C)(C)C3437.4Semi standard non polar33892256
Hovenine A,3TMS,isomer #1CCC(C)C(NC)/C(=N/C1/C(O[Si](C)(C)C)=N\C(CC(C)C)/C(O[Si](C)(C)C)=N\C=C/C2=CC=C(C=C2)OC1C(C)C)O[Si](C)(C)C3267.8Semi standard non polar33892256
Hovenine A,3TMS,isomer #2CCC(C)C(/C(=N/C1/C(O[Si](C)(C)C)=N\C(CC(C)C)/C(O)=N\C=C/C2=CC=C(C=C2)OC1C(C)C)O[Si](C)(C)C)N(C)[Si](C)(C)C3368.1Semi standard non polar33892256
Hovenine A,3TMS,isomer #3CCC(C)C(/C(=N/C1/C(O)=N\C(CC(C)C)/C(O[Si](C)(C)C)=N\C=C/C2=CC=C(C=C2)OC1C(C)C)O[Si](C)(C)C)N(C)[Si](C)(C)C3361.4Semi standard non polar33892256
Hovenine A,3TMS,isomer #4CCC(C)C(/C(O)=N/C1/C(O[Si](C)(C)C)=N\C(CC(C)C)/C(O[Si](C)(C)C)=N\C=C/C2=CC=C(C=C2)OC1C(C)C)N(C)[Si](C)(C)C3418.2Semi standard non polar33892256
Hovenine A,4TMS,isomer #1CCC(C)C(/C(=N/C1/C(O[Si](C)(C)C)=N\C(CC(C)C)/C(O[Si](C)(C)C)=N\C=C/C2=CC=C(C=C2)OC1C(C)C)O[Si](C)(C)C)N(C)[Si](C)(C)C3385.8Semi standard non polar33892256
Hovenine A,4TMS,isomer #1CCC(C)C(/C(=N/C1/C(O[Si](C)(C)C)=N\C(CC(C)C)/C(O[Si](C)(C)C)=N\C=C/C2=CC=C(C=C2)OC1C(C)C)O[Si](C)(C)C)N(C)[Si](C)(C)C3343.5Standard non polar33892256
Hovenine A,1TBDMS,isomer #1CCC(C)C(NC)/C(=N/C1/C(O)=N\C(CC(C)C)/C(O)=N\C=C/C2=CC=C(C=C2)OC1C(C)C)O[Si](C)(C)C(C)(C)C3568.2Semi standard non polar33892256
Hovenine A,1TBDMS,isomer #2CCC(C)C(NC)/C(O)=N/C1/C(O)=N\C(CC(C)C)/C(O[Si](C)(C)C(C)(C)C)=N\C=C/C2=CC=C(C=C2)OC1C(C)C3608.7Semi standard non polar33892256
Hovenine A,1TBDMS,isomer #3CCC(C)C(NC)/C(O)=N/C1/C(O[Si](C)(C)C(C)(C)C)=N\C(CC(C)C)/C(O)=N\C=C/C2=CC=C(C=C2)OC1C(C)C3588.8Semi standard non polar33892256
Hovenine A,1TBDMS,isomer #4CCC(C)C(/C(O)=N/C1/C(O)=N\C(CC(C)C)/C(O)=N\C=C/C2=CC=C(C=C2)OC1C(C)C)N(C)[Si](C)(C)C(C)(C)C3697.7Semi standard non polar33892256
Hovenine A,2TBDMS,isomer #1CCC(C)C(NC)/C(=N/C1/C(O[Si](C)(C)C(C)(C)C)=N\C(CC(C)C)/C(O)=N\C=C/C2=CC=C(C=C2)OC1C(C)C)O[Si](C)(C)C(C)(C)C3645.8Semi standard non polar33892256
Hovenine A,2TBDMS,isomer #2CCC(C)C(NC)/C(=N/C1/C(O)=N\C(CC(C)C)/C(O[Si](C)(C)C(C)(C)C)=N\C=C/C2=CC=C(C=C2)OC1C(C)C)O[Si](C)(C)C(C)(C)C3650.9Semi standard non polar33892256
Hovenine A,2TBDMS,isomer #3CCC(C)C(/C(=N/C1/C(O)=N\C(CC(C)C)/C(O)=N\C=C/C2=CC=C(C=C2)OC1C(C)C)O[Si](C)(C)C(C)(C)C)N(C)[Si](C)(C)C(C)(C)C3805.0Semi standard non polar33892256
Hovenine A,2TBDMS,isomer #4CCC(C)C(NC)/C(O)=N/C1/C(O[Si](C)(C)C(C)(C)C)=N\C(CC(C)C)/C(O[Si](C)(C)C(C)(C)C)=N\C=C/C2=CC=C(C=C2)OC1C(C)C3670.3Semi standard non polar33892256
Hovenine A,2TBDMS,isomer #5CCC(C)C(/C(O)=N/C1/C(O)=N\C(CC(C)C)/C(O[Si](C)(C)C(C)(C)C)=N\C=C/C2=CC=C(C=C2)OC1C(C)C)N(C)[Si](C)(C)C(C)(C)C3822.1Semi standard non polar33892256
Hovenine A,2TBDMS,isomer #6CCC(C)C(/C(O)=N/C1/C(O[Si](C)(C)C(C)(C)C)=N\C(CC(C)C)/C(O)=N\C=C/C2=CC=C(C=C2)OC1C(C)C)N(C)[Si](C)(C)C(C)(C)C3824.2Semi standard non polar33892256
Hovenine A,3TBDMS,isomer #1CCC(C)C(NC)/C(=N/C1/C(O[Si](C)(C)C(C)(C)C)=N\C(CC(C)C)/C(O[Si](C)(C)C(C)(C)C)=N\C=C/C2=CC=C(C=C2)OC1C(C)C)O[Si](C)(C)C(C)(C)C3759.6Semi standard non polar33892256
Hovenine A,3TBDMS,isomer #2CCC(C)C(/C(=N/C1/C(O[Si](C)(C)C(C)(C)C)=N\C(CC(C)C)/C(O)=N\C=C/C2=CC=C(C=C2)OC1C(C)C)O[Si](C)(C)C(C)(C)C)N(C)[Si](C)(C)C(C)(C)C3966.4Semi standard non polar33892256
Hovenine A,3TBDMS,isomer #3CCC(C)C(/C(=N/C1/C(O)=N\C(CC(C)C)/C(O[Si](C)(C)C(C)(C)C)=N\C=C/C2=CC=C(C=C2)OC1C(C)C)O[Si](C)(C)C(C)(C)C)N(C)[Si](C)(C)C(C)(C)C3950.1Semi standard non polar33892256
Hovenine A,3TBDMS,isomer #4CCC(C)C(/C(O)=N/C1/C(O[Si](C)(C)C(C)(C)C)=N\C(CC(C)C)/C(O[Si](C)(C)C(C)(C)C)=N\C=C/C2=CC=C(C=C2)OC1C(C)C)N(C)[Si](C)(C)C(C)(C)C3969.8Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Hovenine A GC-MS (Non-derivatized) - 70eV, Positivesplash10-006x-9200200000-752d5fe94f02e54314b32017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Hovenine A GC-MS (2 TMS) - 70eV, Positivesplash10-0006-9200012000-8eef72be7aeb11577ba42017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Hovenine A GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hovenine A 10V, Positive-QTOFsplash10-0k9i-1407900000-16ac8e0e74ada9ce24f12016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hovenine A 20V, Positive-QTOFsplash10-0pb9-5409000000-e525d2c14b5b2ad338bc2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hovenine A 40V, Positive-QTOFsplash10-0a4i-9002000000-c8529501e3e45895409e2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hovenine A 10V, Negative-QTOFsplash10-000i-0101900000-0f79b37e4b0fea447d8d2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hovenine A 20V, Negative-QTOFsplash10-0a70-1305900000-6ba16a3ceb44f20ac9472016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hovenine A 40V, Negative-QTOFsplash10-0pb9-8209000000-516031dffc6e7688ab292016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hovenine A 10V, Positive-QTOFsplash10-000i-0000900000-df793b4d59079d7e3bd92021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hovenine A 20V, Positive-QTOFsplash10-000i-1103900000-90cdc5c77ef6d2c79e732021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hovenine A 40V, Positive-QTOFsplash10-0pb9-8209100000-4b061ce9c27f492b9b122021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hovenine A 10V, Negative-QTOFsplash10-000i-0001900000-0d28c70ac8609cb8abb42021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hovenine A 20V, Negative-QTOFsplash10-052r-0009500000-87a1d4bd29342bb2e66c2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hovenine A 40V, Negative-QTOFsplash10-0a4i-1029000000-3c97152e0a3af68ba2a72021-09-23Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Cytoplasm
  • Extracellular
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB002018
KNApSAcK IDC00055458
Chemspider ID4476718
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound5318090
PDB IDNot Available
ChEBI ID175780
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1817871
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .