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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:35:55 UTC
Update Date2023-02-21 17:19:31 UTC
HMDB IDHMDB0030285
Secondary Accession Numbers
  • HMDB30285
Metabolite Identification
Common Name(S)-2-Propylpiperidine
Description(S)-2-Propylpiperidine belongs to the class of organic compounds known as alkaloids and derivatives. These are naturally occurring chemical compounds that contain mostly basic nitrogen atoms. This group also includes some related compounds with neutral and even weakly acidic properties. Also some synthetic compounds of similar structure are attributed to alkaloids. In addition to carbon, hydrogen and nitrogen, alkaloids may also contain oxygen, sulfur and more rarely other elements such as chlorine, bromine, and phosphorus (S)-2-Propylpiperidine has been detected, but not quantified in, black elderberries (Sambucus nigra) and pomegranates (Punica granatum). This could make (S)-2-propylpiperidine a potential biomarker for the consumption of these foods. Based on a literature review very few articles have been published on (S)-2-Propylpiperidine.
Structure
Data?1676999971
Synonyms
ValueSource
2-Propyl-piperidineChEMBL, HMDB
(+)-ConiineHMDB
(2S)-2-PropylpiperidineHMDB
(S)-(+)-ConIIneHMDB
(S)-beta-PropylpiperidineHMDB
2-PropylpiperidineHMDB
alpha-ConineHMDB
CicutinHMDB
CicutineHMDB, MeSH
ConIInHMDB
ConIIneHMDB, MeSH
ConineHMDB
D-ConicineHMDB
ConicineMeSH, HMDB
Coniine hydrochloride, (+-)-isomerMeSH, HMDB
Coniine hydrochloride, (S)-isomerMeSH, HMDB
Coniine, (+-)-isomerMeSH, HMDB
KoniinMeSH, HMDB
Coniine hydrobromide, (S)-isomerMeSH, HMDB
Coniine, (S)-isomerMeSH, HMDB
Chemical FormulaC8H17N
Average Molecular Weight127.2273
Monoisotopic Molecular Weight127.136099549
IUPAC Name2-propylpiperidine
Traditional Name2-propylpiperidine
CAS Registry Number458-88-8
SMILES
CCCC1CCCCN1
InChI Identifier
InChI=1S/C8H17N/c1-2-5-8-6-3-4-7-9-8/h8-9H,2-7H2,1H3
InChI KeyNDNUANOUGZGEPO-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as alkaloids and derivatives. These are naturally occurring chemical compounds that contain mostly basic nitrogen atoms. This group also includes some related compounds with neutral and even weakly acidic properties. Also some synthetic compounds of similar structure are attributed to alkaloids. In addition to carbon, hydrogen and nitrogen, alkaloids may also contain oxygen, sulfur and more rarely other elements such as chlorine, bromine, and phosphorus.
KingdomOrganic compounds
Super ClassAlkaloids and derivatives
ClassNot Available
Sub ClassNot Available
Direct ParentAlkaloids and derivatives
Alternative Parents
Substituents
  • Alkaloid or derivatives
  • Piperidine
  • Azacycle
  • Organoheterocyclic compound
  • Secondary amine
  • Secondary aliphatic amine
  • Organic nitrogen compound
  • Organopnictogen compound
  • Hydrocarbon derivative
  • Organonitrogen compound
  • Amine
  • Aliphatic heteromonocyclic compound
Molecular FrameworkAliphatic heteromonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effect
Disposition
ProcessNot Available
Role
Physical Properties
StateLiquid
Experimental Molecular Properties
PropertyValueReference
Melting Point-2 °CNot Available
Boiling PointNot AvailableNot Available
Water Solubility18 mg/mLNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility3.96 g/LALOGPS
logP2.5ALOGPS
logP2.04ChemAxon
logS-1.5ALOGPS
pKa (Strongest Basic)10.58ChemAxon
Physiological Charge1ChemAxon
Hydrogen Acceptor Count1ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area12.03 ŲChemAxon
Rotatable Bond Count2ChemAxon
Refractivity40.38 m³·mol⁻¹ChemAxon
Polarizability16.57 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+127.28431661259
DarkChem[M-H]-123.47631661259
DeepCCS[M+H]+132.84930932474
DeepCCS[M-H]-129.99830932474
DeepCCS[M-2H]-166.49530932474
DeepCCS[M+Na]+141.27830932474
AllCCS[M+H]+127.932859911
AllCCS[M+H-H2O]+123.132859911
AllCCS[M+NH4]+132.332859911
AllCCS[M+Na]+133.632859911
AllCCS[M-H]-132.832859911
AllCCS[M+Na-2H]-135.032859911
AllCCS[M+HCOO]-137.432859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
(S)-2-PropylpiperidineCCCC1CCCCN11217.0Standard polar33892256
(S)-2-PropylpiperidineCCCC1CCCCN1988.3Standard non polar33892256
(S)-2-PropylpiperidineCCCC1CCCCN1997.6Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
(S)-2-Propylpiperidine,1TMS,isomer #1CCCC1CCCCN1[Si](C)(C)C1157.4Semi standard non polar33892256
(S)-2-Propylpiperidine,1TMS,isomer #1CCCC1CCCCN1[Si](C)(C)C1228.2Standard non polar33892256
(S)-2-Propylpiperidine,1TBDMS,isomer #1CCCC1CCCCN1[Si](C)(C)C(C)(C)C1390.5Semi standard non polar33892256
(S)-2-Propylpiperidine,1TBDMS,isomer #1CCCC1CCCCN1[Si](C)(C)C(C)(C)C1436.2Standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - (S)-2-Propylpiperidine GC-MS (Non-derivatized) - 70eV, Positivesplash10-001i-9100000000-c26fabc7134213b4833a2017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (S)-2-Propylpiperidine GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Experimental LC-MS/MSLC-MS/MS Spectrum - (S)-2-Propylpiperidine 6V, Positive-QTOFsplash10-004i-3900000000-a93660d602d0289b57992021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - (S)-2-Propylpiperidine 6V, Positive-QTOFsplash10-004i-2900000000-67c5c52c7201f5732a7c2021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - (S)-2-Propylpiperidine 6V, Positive-QTOFsplash10-004i-0900000000-1c69bae6712bd26746fe2021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - (S)-2-Propylpiperidine 6V, Positive-QTOFsplash10-004i-0900000000-f91884ef0b7aaa99a0322021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - (S)-2-Propylpiperidine 6V, Positive-QTOFsplash10-004i-3900000000-920ec1f5ad3f886bf1712021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - (S)-2-Propylpiperidine 6V, Positive-QTOFsplash10-004i-0900000000-a52f6ccdc0b239b8682a2021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - (S)-2-Propylpiperidine 6V, Positive-QTOFsplash10-004i-0900000000-c0bced012d1c63535a6a2021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - (S)-2-Propylpiperidine 6V, Positive-QTOFsplash10-004i-0900000000-2e70f41c1a2bec46628f2021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - (S)-2-Propylpiperidine 6V, Positive-QTOFsplash10-004i-0900000000-53018ad9ac98b4705c7a2021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - (S)-2-Propylpiperidine 6V, Positive-QTOFsplash10-004i-0900000000-6f9e197509a5097ff0ca2021-09-20HMDB team, MONAView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (S)-2-Propylpiperidine 10V, Positive-QTOFsplash10-004i-1900000000-8446fd3207355a337a792016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (S)-2-Propylpiperidine 20V, Positive-QTOFsplash10-004i-9800000000-4ec3dcb07ee2c3102a842016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (S)-2-Propylpiperidine 40V, Positive-QTOFsplash10-0a4l-9000000000-51d3e3bf36a0d7a91cf82016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (S)-2-Propylpiperidine 10V, Negative-QTOFsplash10-004i-0900000000-8c4d68826ec0a10d837d2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (S)-2-Propylpiperidine 20V, Negative-QTOFsplash10-004i-1900000000-ab329affc6cbd47d80bc2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (S)-2-Propylpiperidine 40V, Negative-QTOFsplash10-00lr-9100000000-3baf1c48d9896e0ddb4c2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (S)-2-Propylpiperidine 10V, Positive-QTOFsplash10-004i-2900000000-0b416b6772b891edc26a2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (S)-2-Propylpiperidine 20V, Positive-QTOFsplash10-06ec-9100000000-16067e1cadcfcc8ffc3e2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (S)-2-Propylpiperidine 40V, Positive-QTOFsplash10-054o-9300000000-6bf48a19d6c3d7a07a5f2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (S)-2-Propylpiperidine 10V, Negative-QTOFsplash10-004i-0900000000-a5cf938a3cb2f0691e232021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (S)-2-Propylpiperidine 20V, Negative-QTOFsplash10-004i-0900000000-d9d10496c765862906952021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (S)-2-Propylpiperidine 40V, Negative-QTOFsplash10-0089-9300000000-29e9666e8556f2ad34472021-09-25Wishart LabView Spectrum

NMR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted 1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum

IR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M-H]-)2023-02-03FELIX labView Spectrum
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+H]+)2023-02-03FELIX labView Spectrum
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+Na]+)2023-02-03FELIX labView Spectrum
Biological Properties
Cellular Locations
  • Cytoplasm
  • Extracellular
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB002120
KNApSAcK IDC00002031
Chemspider ID9591
KEGG Compound IDC06523
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound9985
PDB IDNot Available
ChEBI ID127791
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1359891
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .