Hmdb loader
Survey
You are using an unsupported browser. Please upgrade your browser to a newer version to get the best experience on Human Metabolome Database.
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 19:16:28 UTC
Update Date2023-02-21 17:24:14 UTC
HMDB IDHMDB0034429
Secondary Accession Numbers
  • HMDB34429
Metabolite Identification
Common NameCyclohexyl pentanoate
DescriptionCyclohexyl pentanoate belongs to the class of organic compounds known as fatty acid esters. These are carboxylic ester derivatives of a fatty acid. Based on a literature review a small amount of articles have been published on Cyclohexyl pentanoate.
Structure
Data?1677000254
Synonyms
ValueSource
Cyclohexyl pentanoic acidGenerator
1-Cyclohexyl pentanoateHMDB
Cyclohexyl N-valerateHMDB
Cyclohexyl valerateHMDB
Pentanoic acid, cyclohexyl esterHMDB
Chemical FormulaC11H20O2
Average Molecular Weight184.2753
Monoisotopic Molecular Weight184.146329884
IUPAC Namecyclohexyl pentanoate
Traditional Namecyclohexyl pentanoate
CAS Registry Number1551-43-5
SMILES
CCCCC(=O)OC1CCCCC1
InChI Identifier
InChI=1S/C11H20O2/c1-2-3-9-11(12)13-10-7-5-4-6-8-10/h10H,2-9H2,1H3
InChI KeyYLCHTSSXNSNXSW-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as fatty acid esters. These are carboxylic ester derivatives of a fatty acid.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassFatty Acyls
Sub ClassFatty acid esters
Direct ParentFatty acid esters
Alternative Parents
Substituents
  • Fatty acid ester
  • Carboxylic acid ester
  • Monocarboxylic acid or derivatives
  • Carboxylic acid derivative
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Carbonyl group
  • Aliphatic homomonocyclic compound
Molecular FrameworkAliphatic homomonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Process
Role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling Point231.00 to 233.00 °C. @ 760.00 mm HgThe Good Scents Company Information System
Water Solubility16.03 mg/L @ 25 °C (est)The Good Scents Company Information System
LogP3.776 (est)The Good Scents Company Information System
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.12 g/LALOGPS
logP3.64ALOGPS
logP3.31ChemAxon
logS-3.2ALOGPS
pKa (Strongest Basic)-7ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count1ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area26.3 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity52.26 m³·mol⁻¹ChemAxon
Polarizability22.25 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+143.95831661259
DarkChem[M-H]-142.10931661259
DeepCCS[M+H]+148.730932474
DeepCCS[M-H]-145.78330932474
DeepCCS[M-2H]-182.3230932474
DeepCCS[M+Na]+157.77730932474
AllCCS[M+H]+145.532859911
AllCCS[M+H-H2O]+141.632859911
AllCCS[M+NH4]+149.132859911
AllCCS[M+Na]+150.132859911
AllCCS[M-H]-146.832859911
AllCCS[M+Na-2H]-147.932859911
AllCCS[M+HCOO]-149.232859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Cyclohexyl pentanoateCCCCC(=O)OC1CCCCC11665.8Standard polar33892256
Cyclohexyl pentanoateCCCCC(=O)OC1CCCCC11330.0Standard non polar33892256
Cyclohexyl pentanoateCCCCC(=O)OC1CCCCC11343.5Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Experimental GC-MSGC-MS Spectrum - Cyclohexyl pentanoate EI-B (Non-derivatized)splash10-0pc9-9100000000-97888717f3890d192d1b2017-09-12HMDB team, MONA, MassBankView Spectrum
Experimental GC-MSGC-MS Spectrum - Cyclohexyl pentanoate EI-B (Non-derivatized)splash10-0pc9-9100000000-97888717f3890d192d1b2018-05-18HMDB team, MONA, MassBankView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Cyclohexyl pentanoate GC-MS (Non-derivatized) - 70eV, Positivesplash10-053r-9200000000-1273f53f8aacbc5d124e2017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Cyclohexyl pentanoate GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclohexyl pentanoate 10V, Positive-QTOFsplash10-000i-6900000000-cfc6517ff74073e43ea02016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclohexyl pentanoate 20V, Positive-QTOFsplash10-0f8i-9300000000-239237874e80398d2f852016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclohexyl pentanoate 40V, Positive-QTOFsplash10-0006-9000000000-923ebdb6c5050e50f4c92016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclohexyl pentanoate 10V, Negative-QTOFsplash10-001i-5900000000-19596abb47f053e89b2f2016-08-04Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclohexyl pentanoate 20V, Negative-QTOFsplash10-000t-9400000000-568c5fe6f82b426fa5ae2016-08-04Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclohexyl pentanoate 40V, Negative-QTOFsplash10-0002-9000000000-5aff4ec170b67969b8922016-08-04Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclohexyl pentanoate 10V, Negative-QTOFsplash10-001j-9800000000-69a34dc5c0cab92288162021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclohexyl pentanoate 20V, Negative-QTOFsplash10-0002-9000000000-24771bb0fae095f5f5172021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclohexyl pentanoate 40V, Negative-QTOFsplash10-015a-9000000000-1b99f341e806009043cd2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclohexyl pentanoate 10V, Positive-QTOFsplash10-001i-9000000000-e69c2a4f40aabfbd503d2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclohexyl pentanoate 20V, Positive-QTOFsplash10-0a5c-9000000000-c5972d47a644a7fb9b382021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclohexyl pentanoate 40V, Positive-QTOFsplash10-001i-9000000000-e6e48265fc7e4bafa6102021-09-23Wishart LabView Spectrum

IR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+H]+)2023-02-04FELIX labView Spectrum
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+Na]+)2023-02-04FELIX labView Spectrum
Biological Properties
Cellular Locations
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB012827
KNApSAcK IDNot Available
Chemspider ID66412
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound73772
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1041931
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.