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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 19:37:22 UTC
Update Date2022-03-07 02:54:13 UTC
HMDB IDHMDB0034720
Secondary Accession Numbers
  • HMDB34720
Metabolite Identification
Common NameGingerenone C
DescriptionGingerenone C belongs to the class of organic compounds known as linear diarylheptanoids. These are diarylheptanoids with an open heptane chain. The two aromatic rings are linked only by the heptane chain. Gingerenone C is found, on average, in the highest concentration within gingers (Zingiber officinale). Gingerenone C has also been detected, but not quantified in, herbs and spices. This could make gingerenone C a potential biomarker for the consumption of these foods. Gingerenone C is a secondary metabolite. Secondary metabolites are metabolically or physiologically non-essential metabolites that may serve a role as defense or signalling molecules. In some cases they are simply molecules that arise from the incomplete metabolism of other secondary metabolites. Based on a literature review a small amount of articles have been published on Gingerenone C.
Structure
Data?1563862609
Synonyms
ValueSource
1-(4-Hydroxy-3-methoxyphenyl)-7-(4-hydroxyphenyl)-4-hepten-3-oneHMDB
Chemical FormulaC20H22O4
Average Molecular Weight326.3863
Monoisotopic Molecular Weight326.151809192
IUPAC Name(4E)-1-(4-hydroxy-3-methoxyphenyl)-7-(4-hydroxyphenyl)hept-4-en-3-one
Traditional Name(4E)-1-(4-hydroxy-3-methoxyphenyl)-7-(4-hydroxyphenyl)hept-4-en-3-one
CAS Registry Number128701-01-9
SMILES
COC1=C(O)C=CC(CCC(=O)\C=C\CCC2=CC=C(O)C=C2)=C1
InChI Identifier
InChI=1S/C20H22O4/c1-24-20-14-16(9-13-19(20)23)8-12-17(21)5-3-2-4-15-6-10-18(22)11-7-15/h3,5-7,9-11,13-14,22-23H,2,4,8,12H2,1H3/b5-3+
InChI KeyJYHZFCAVESZNKO-HWKANZROSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as linear diarylheptanoids. These are diarylheptanoids with an open heptane chain. The two aromatic rings are linked only by the heptane chain.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassDiarylheptanoids
Sub ClassLinear diarylheptanoids
Direct ParentLinear diarylheptanoids
Alternative Parents
Substituents
  • Linear 1,7-diphenylheptane skeleton
  • Shogaol
  • Methoxyphenol
  • Anisole
  • Methoxybenzene
  • Phenol ether
  • Phenoxy compound
  • Alkyl aryl ether
  • 1-hydroxy-2-unsubstituted benzenoid
  • Phenol
  • Benzenoid
  • Monocyclic benzene moiety
  • Alpha,beta-unsaturated ketone
  • Enone
  • Acryloyl-group
  • Ketone
  • Ether
  • Organic oxygen compound
  • Carbonyl group
  • Organooxygen compound
  • Hydrocarbon derivative
  • Organic oxide
  • Aromatic homomonocyclic compound
Molecular FrameworkAromatic homomonocyclic compounds
External Descriptors
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
Role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water Solubility10.63 mg/L @ 25 °C (est)The Good Scents Company Information System
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.0062 g/LALOGPS
logP4.12ALOGPS
logP4.79ChemAxon
logS-4.7ALOGPS
pKa (Strongest Acidic)9.78ChemAxon
pKa (Strongest Basic)-4.5ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area66.76 ŲChemAxon
Rotatable Bond Count8ChemAxon
Refractivity95.56 m³·mol⁻¹ChemAxon
Polarizability36.02 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+184.76830932474
DeepCCS[M-H]-182.4130932474
DeepCCS[M-2H]-216.65830932474
DeepCCS[M+Na]+192.69130932474
AllCCS[M+H]+183.132859911
AllCCS[M+H-H2O]+179.632859911
AllCCS[M+NH4]+186.332859911
AllCCS[M+Na]+187.232859911
AllCCS[M-H]-181.332859911
AllCCS[M+Na-2H]-181.532859911
AllCCS[M+HCOO]-181.932859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Gingerenone CCOC1=C(O)C=CC(CCC(=O)\C=C\CCC2=CC=C(O)C=C2)=C14919.4Standard polar33892256
Gingerenone CCOC1=C(O)C=CC(CCC(=O)\C=C\CCC2=CC=C(O)C=C2)=C12931.3Standard non polar33892256
Gingerenone CCOC1=C(O)C=CC(CCC(=O)\C=C\CCC2=CC=C(O)C=C2)=C13038.4Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Gingerenone C,1TMS,isomer #1COC1=CC(CCC(=O)/C=C/CCC2=CC=C(O)C=C2)=CC=C1O[Si](C)(C)C3072.4Semi standard non polar33892256
Gingerenone C,1TMS,isomer #2COC1=CC(CCC(=O)/C=C/CCC2=CC=C(O[Si](C)(C)C)C=C2)=CC=C1O2990.4Semi standard non polar33892256
Gingerenone C,1TMS,isomer #3COC1=CC(CC=C(/C=C/CCC2=CC=C(O)C=C2)O[Si](C)(C)C)=CC=C1O3337.2Semi standard non polar33892256
Gingerenone C,2TMS,isomer #1COC1=CC(CCC(=O)/C=C/CCC2=CC=C(O[Si](C)(C)C)C=C2)=CC=C1O[Si](C)(C)C3029.3Semi standard non polar33892256
Gingerenone C,2TMS,isomer #2COC1=CC(CC=C(/C=C/CCC2=CC=C(O)C=C2)O[Si](C)(C)C)=CC=C1O[Si](C)(C)C3281.6Semi standard non polar33892256
Gingerenone C,2TMS,isomer #3COC1=CC(CC=C(/C=C/CCC2=CC=C(O[Si](C)(C)C)C=C2)O[Si](C)(C)C)=CC=C1O3226.3Semi standard non polar33892256
Gingerenone C,3TMS,isomer #1COC1=CC(CC=C(/C=C/CCC2=CC=C(O[Si](C)(C)C)C=C2)O[Si](C)(C)C)=CC=C1O[Si](C)(C)C3241.1Semi standard non polar33892256
Gingerenone C,3TMS,isomer #1COC1=CC(CC=C(/C=C/CCC2=CC=C(O[Si](C)(C)C)C=C2)O[Si](C)(C)C)=CC=C1O[Si](C)(C)C2876.4Standard non polar33892256
Gingerenone C,1TBDMS,isomer #1COC1=CC(CCC(=O)/C=C/CCC2=CC=C(O)C=C2)=CC=C1O[Si](C)(C)C(C)(C)C3334.2Semi standard non polar33892256
Gingerenone C,1TBDMS,isomer #2COC1=CC(CCC(=O)/C=C/CCC2=CC=C(O[Si](C)(C)C(C)(C)C)C=C2)=CC=C1O3273.4Semi standard non polar33892256
Gingerenone C,1TBDMS,isomer #3COC1=CC(CC=C(/C=C/CCC2=CC=C(O)C=C2)O[Si](C)(C)C(C)(C)C)=CC=C1O3611.4Semi standard non polar33892256
Gingerenone C,2TBDMS,isomer #1COC1=CC(CCC(=O)/C=C/CCC2=CC=C(O[Si](C)(C)C(C)(C)C)C=C2)=CC=C1O[Si](C)(C)C(C)(C)C3505.3Semi standard non polar33892256
Gingerenone C,2TBDMS,isomer #2COC1=CC(CC=C(/C=C/CCC2=CC=C(O)C=C2)O[Si](C)(C)C(C)(C)C)=CC=C1O[Si](C)(C)C(C)(C)C3821.9Semi standard non polar33892256
Gingerenone C,2TBDMS,isomer #3COC1=CC(CC=C(/C=C/CCC2=CC=C(O[Si](C)(C)C(C)(C)C)C=C2)O[Si](C)(C)C(C)(C)C)=CC=C1O3762.6Semi standard non polar33892256
Gingerenone C,3TBDMS,isomer #1COC1=CC(CC=C(/C=C/CCC2=CC=C(O[Si](C)(C)C(C)(C)C)C=C2)O[Si](C)(C)C(C)(C)C)=CC=C1O[Si](C)(C)C(C)(C)C3982.9Semi standard non polar33892256
Gingerenone C,3TBDMS,isomer #1COC1=CC(CC=C(/C=C/CCC2=CC=C(O[Si](C)(C)C(C)(C)C)C=C2)O[Si](C)(C)C(C)(C)C)=CC=C1O[Si](C)(C)C(C)(C)C3466.0Standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Gingerenone C GC-MS (Non-derivatized) - 70eV, Positivesplash10-0a6r-1910000000-d897675d4fa5716fb8bf2017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Gingerenone C GC-MS (2 TMS) - 70eV, Positivesplash10-0a4i-2292400000-8c4e894f64e2c90d2d4a2017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Gingerenone C GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gingerenone C 10V, Positive-QTOFsplash10-004i-0319000000-d5f0f78b09bdc54604832016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gingerenone C 20V, Positive-QTOFsplash10-057s-0921000000-86df3ef5ac19956e5f752016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gingerenone C 40V, Positive-QTOFsplash10-0a4r-2910000000-5f0ac72e39ac864f30a12016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gingerenone C 10V, Negative-QTOFsplash10-004i-0209000000-e680c9e676f5b4f48ba02016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gingerenone C 20V, Negative-QTOFsplash10-004i-0916000000-18f6980c470ad6e064052016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gingerenone C 40V, Negative-QTOFsplash10-000i-1900000000-0d65ff5e7d57779124752016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gingerenone C 10V, Positive-QTOFsplash10-004i-0129000000-4bbb0a14e7d5ec9fe05a2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gingerenone C 20V, Positive-QTOFsplash10-0a70-0931000000-331820dfa90e14528c1f2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gingerenone C 40V, Positive-QTOFsplash10-000i-1910000000-be21856b540b6d7294fe2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gingerenone C 10V, Negative-QTOFsplash10-004i-0009000000-efbc03013831507c99232021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gingerenone C 20V, Negative-QTOFsplash10-00di-0937000000-abe393de46b3639551cb2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gingerenone C 40V, Negative-QTOFsplash10-0g4i-1694000000-9bef7c9fecb594c31ebc2021-09-22Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB013257
KNApSAcK IDNot Available
Chemspider ID4476437
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound5317593
PDB IDNot Available
ChEBI ID70703
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1845361
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .