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Showing metabocard for (1R,2S,3S,4R)-p-Menthane-2,3-diol (HMDB0035723)

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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 20:44:16 UTC
Update Date2022-03-07 02:54:36 UTC
HMDB IDHMDB0035723
Secondary Accession Numbers
  • HMDB35723
Metabolite Identification
Common Name(1R,2S,3S,4R)-p-Menthane-2,3-diol
Description(1R,2S,3S,4R)-p-Menthane-2,3-diol belongs to the class of organic compounds known as menthane monoterpenoids. These are monoterpenoids with a structure based on the o-, m-, or p-menthane backbone. P-menthane consists of the cyclohexane ring with a methyl group and a (2-methyl)-propyl group at the 1 and 4 ring position, respectively. The o- and m- menthanes are much rarer, and presumably arise by alkyl migration of p-menthanes. Based on a literature review a small amount of articles have been published on (1R,2S,3S,4R)-p-Menthane-2,3-diol.
Structure
Data?1563862761
MOL3D MOLSDF3D SDFPDB3D PDBSMILESInChI

MOL for HMDB0035723 ((1R,2S,3S,4R)-p-Menthane-2,3-diol)


  Mrv0541 05061308402D          

 12 12  0  0  0  0            999 V2000
    0.0000    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -0.4125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145    1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  5  4  1  0  0  0  0
  6  1  1  0  0  0  0
  6  2  1  0  0  0  0
  7  3  1  0  0  0  0
  7  4  1  0  0  0  0
  8  5  1  0  0  0  0
  8  6  1  0  0  0  0
  9  7  1  0  0  0  0
 10  8  1  0  0  0  0
 10  9  1  0  0  0  0
 11  9  1  0  0  0  0
 12 10  1  0  0  0  0
M  END
Download

3D MOL for HMDB0035723 ((1R,2S,3S,4R)-p-Menthane-2,3-diol)

HMDB0035723
     RDKit          3D
(1R,2S,3S,4R)-p-Menthane-2,3-diol
 32 32  0  0  0  0  0  0  0  0999 V2000
   -2.8598   -1.0439   -0.3076 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0752    0.2048   -0.1794 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8898    1.2246    0.5737 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7035    0.0059    0.4384 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0456    1.3324    0.4997 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4284    1.3311    0.6485 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0488   -0.0348    0.7261 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5384    0.1259    0.4329 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4913   -0.9535   -0.3221 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0835   -2.2159   -0.1157 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0117   -1.0332   -0.3542 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4628   -0.9666   -1.6794 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6811   -1.0604    0.4664 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4135   -1.0084   -1.2912 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3060   -1.9769   -0.2559 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8813    0.6544   -1.1960 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3790    2.1829    0.7220 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7792    1.4538   -0.0826 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2948    0.7596    1.4740 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8544   -0.3736    1.4801 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3103    1.8918   -0.4374 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4748    1.8813    1.3890 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7897    1.8910    1.5612 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9346    1.8583   -0.2104 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9775   -0.4574    1.7481 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8410    1.2005    0.4641 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7937   -0.2337   -0.5829 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1647   -0.3928    1.1870 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8574   -0.5958   -1.3188 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4541   -2.9202   -0.4091 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2853   -2.0505    0.0158 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2814   -0.6810   -2.2569 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  2  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  7  9  1  0
  9 10  1  0
  9 11  1  0
 11 12  1  0
 11  4  1  0
  1 13  1  0
  1 14  1  0
  1 15  1  0
  2 16  1  0
  3 17  1  0
  3 18  1  0
  3 19  1  0
  4 20  1  0
  5 21  1  0
  5 22  1  0
  6 23  1  0
  6 24  1  0
  7 25  1  0
  8 26  1  0
  8 27  1  0
  8 28  1  0
  9 29  1  0
 10 30  1  0
 11 31  1  0
 12 32  1  0
M  END
Download

3D SDF for HMDB0035723 ((1R,2S,3S,4R)-p-Menthane-2,3-diol)


  Mrv0541 05061308402D          

 12 12  0  0  0  0            999 V2000
    0.0000    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -0.4125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145    1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  5  4  1  0  0  0  0
  6  1  1  0  0  0  0
  6  2  1  0  0  0  0
  7  3  1  0  0  0  0
  7  4  1  0  0  0  0
  8  5  1  0  0  0  0
  8  6  1  0  0  0  0
  9  7  1  0  0  0  0
 10  8  1  0  0  0  0
 10  9  1  0  0  0  0
 11  9  1  0  0  0  0
 12 10  1  0  0  0  0
M  END
> <DATABASE_ID>
HMDB0035723

> <DATABASE_NAME>
hmdb

> <SMILES>
CC(C)C1CCC(C)C(O)C1O

> <INCHI_IDENTIFIER>
InChI=1S/C10H20O2/c1-6(2)8-5-4-7(3)9(11)10(8)12/h6-12H,4-5H2,1-3H3

> <INCHI_KEY>
WQFGPARDTSBVLU-UHFFFAOYSA-N

> <FORMULA>
C10H20O2

> <MOLECULAR_WEIGHT>
172.2646

> <EXACT_MASS>
172.146329884

> <JCHEM_ACCEPTOR_COUNT>
2

> <JCHEM_AVERAGE_POLARIZABILITY>
20.475269461617152

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
3-methyl-6-(propan-2-yl)cyclohexane-1,2-diol

> <ALOGPS_LOGP>
1.37

> <JCHEM_LOGP>
1.6673232699999998

> <ALOGPS_LOGS>
-0.96

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
15.081370837743197

> <JCHEM_PKA_STRONGEST_ACIDIC>
13.656100004040422

> <JCHEM_PKA_STRONGEST_BASIC>
-3.251519585730615

> <JCHEM_POLAR_SURFACE_AREA>
40.46

> <JCHEM_REFRACTIVITY>
48.7298

> <JCHEM_ROTATABLE_BOND_COUNT>
1

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.91e+01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
3-isopropyl-6-methylcyclohexane-1,2-diol

> <JCHEM_VEBER_RULE>
0

$$$$
Download

3D-SDF for HMDB0035723 ((1R,2S,3S,4R)-p-Menthane-2,3-diol)

HMDB0035723
     RDKit          3D
(1R,2S,3S,4R)-p-Menthane-2,3-diol
 32 32  0  0  0  0  0  0  0  0999 V2000
   -2.8598   -1.0439   -0.3076 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0752    0.2048   -0.1794 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8898    1.2246    0.5737 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7035    0.0059    0.4384 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0456    1.3324    0.4997 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4284    1.3311    0.6485 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0488   -0.0348    0.7261 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5384    0.1259    0.4329 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4913   -0.9535   -0.3221 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0835   -2.2159   -0.1157 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0117   -1.0332   -0.3542 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4628   -0.9666   -1.6794 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6811   -1.0604    0.4664 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4135   -1.0084   -1.2912 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3060   -1.9769   -0.2559 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8813    0.6544   -1.1960 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3790    2.1829    0.7220 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7792    1.4538   -0.0826 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2948    0.7596    1.4740 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8544   -0.3736    1.4801 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3103    1.8918   -0.4374 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4748    1.8813    1.3890 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7897    1.8910    1.5612 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9346    1.8583   -0.2104 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9775   -0.4574    1.7481 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8410    1.2005    0.4641 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7937   -0.2337   -0.5829 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1647   -0.3928    1.1870 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8574   -0.5958   -1.3188 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4541   -2.9202   -0.4091 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2853   -2.0505    0.0158 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2814   -0.6810   -2.2569 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  2  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  7  9  1  0
  9 10  1  0
  9 11  1  0
 11 12  1  0
 11  4  1  0
  1 13  1  0
  1 14  1  0
  1 15  1  0
  2 16  1  0
  3 17  1  0
  3 18  1  0
  3 19  1  0
  4 20  1  0
  5 21  1  0
  5 22  1  0
  6 23  1  0
  6 24  1  0
  7 25  1  0
  8 26  1  0
  8 27  1  0
  8 28  1  0
  9 29  1  0
 10 30  1  0
 11 31  1  0
 12 32  1  0
M  END
Download

PDB for HMDB0035723 ((1R,2S,3S,4R)-p-Menthane-2,3-diol)

HEADER    PROTEIN                                 06-MAY-13   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   06-MAY-13         0                                  
HETATM    1  C   UNK     0       0.000   4.620   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       2.667   4.620   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       1.334  -2.310   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       2.667   0.000   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       2.667   1.540   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       1.334   3.850   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       1.334  -0.770   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       1.334   2.310   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       0.000   0.000   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       0.000   1.540   0.000  0.00  0.00           C+0
HETATM   11  O   UNK     0      -1.334  -0.770   0.000  0.00  0.00           O+0
HETATM   12  O   UNK     0      -1.334   2.310   0.000  0.00  0.00           O+0
CONECT    1    6                                                            
CONECT    2    6                                                            
CONECT    3    7                                                            
CONECT    4    5    7                                                       
CONECT    5    4    8                                                       
CONECT    6    1    2    8                                                  
CONECT    7    3    4    9                                                  
CONECT    8    5    6   10                                                  
CONECT    9    7   10   11                                                  
CONECT   10    8    9   12                                                  
CONECT   11    9                                                            
CONECT   12   10                                                            
MASTER        0    0    0    0    0    0    0    0   12    0   24    0
END
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3D PDB for HMDB0035723 ((1R,2S,3S,4R)-p-Menthane-2,3-diol)

COMPND    HMDB0035723
HETATM    1  C1  UNL     1      -2.860  -1.044  -0.308  1.00  0.00           C  
HETATM    2  C2  UNL     1      -2.075   0.205  -0.179  1.00  0.00           C  
HETATM    3  C3  UNL     1      -2.890   1.225   0.574  1.00  0.00           C  
HETATM    4  C4  UNL     1      -0.704   0.006   0.438  1.00  0.00           C  
HETATM    5  C5  UNL     1      -0.046   1.332   0.500  1.00  0.00           C  
HETATM    6  C6  UNL     1       1.428   1.331   0.649  1.00  0.00           C  
HETATM    7  C7  UNL     1       2.049  -0.035   0.726  1.00  0.00           C  
HETATM    8  C8  UNL     1       3.538   0.126   0.433  1.00  0.00           C  
HETATM    9  C9  UNL     1       1.491  -0.953  -0.322  1.00  0.00           C  
HETATM   10  O1  UNL     1       2.083  -2.216  -0.116  1.00  0.00           O  
HETATM   11  C10 UNL     1       0.012  -1.033  -0.354  1.00  0.00           C  
HETATM   12  O2  UNL     1      -0.463  -0.967  -1.679  1.00  0.00           O  
HETATM   13  H1  UNL     1      -3.681  -1.060   0.466  1.00  0.00           H  
HETATM   14  H2  UNL     1      -3.414  -1.008  -1.291  1.00  0.00           H  
HETATM   15  H3  UNL     1      -2.306  -1.977  -0.256  1.00  0.00           H  
HETATM   16  H4  UNL     1      -1.881   0.654  -1.196  1.00  0.00           H  
HETATM   17  H5  UNL     1      -2.379   2.183   0.722  1.00  0.00           H  
HETATM   18  H6  UNL     1      -3.779   1.454  -0.083  1.00  0.00           H  
HETATM   19  H7  UNL     1      -3.295   0.760   1.474  1.00  0.00           H  
HETATM   20  H8  UNL     1      -0.854  -0.374   1.480  1.00  0.00           H  
HETATM   21  H9  UNL     1      -0.310   1.892  -0.437  1.00  0.00           H  
HETATM   22  H10 UNL     1      -0.475   1.881   1.389  1.00  0.00           H  
HETATM   23  H11 UNL     1       1.790   1.891   1.561  1.00  0.00           H  
HETATM   24  H12 UNL     1       1.935   1.858  -0.210  1.00  0.00           H  
HETATM   25  H13 UNL     1       1.978  -0.457   1.748  1.00  0.00           H  
HETATM   26  H14 UNL     1       3.841   1.201   0.464  1.00  0.00           H  
HETATM   27  H15 UNL     1       3.794  -0.234  -0.583  1.00  0.00           H  
HETATM   28  H16 UNL     1       4.165  -0.393   1.187  1.00  0.00           H  
HETATM   29  H17 UNL     1       1.857  -0.596  -1.319  1.00  0.00           H  
HETATM   30  H18 UNL     1       1.454  -2.920  -0.409  1.00  0.00           H  
HETATM   31  H19 UNL     1      -0.285  -2.051   0.016  1.00  0.00           H  
HETATM   32  H20 UNL     1       0.281  -0.681  -2.257  1.00  0.00           H  
CONECT    1    2   13   14   15
CONECT    2    3    4   16
CONECT    3   17   18   19
CONECT    4    5   11   20
CONECT    5    6   21   22
CONECT    6    7   23   24
CONECT    7    8    9   25
CONECT    8   26   27   28
CONECT    9   10   11   29
CONECT   10   30
CONECT   11   12   31
CONECT   12   32
END
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SMILES for HMDB0035723 ((1R,2S,3S,4R)-p-Menthane-2,3-diol)

CC(C)C1CCC(C)C(O)C1O
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INCHI for HMDB0035723 ((1R,2S,3S,4R)-p-Menthane-2,3-diol)

InChI=1S/C10H20O2/c1-6(2)8-5-4-7(3)9(11)10(8)12/h6-12H,4-5H2,1-3H3
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View in JSmolView NMR AssignmentsView Stereo Labels
SynonymsNot Available
Chemical FormulaC10H20O2
Average Molecular Weight172.2646
Monoisotopic Molecular Weight172.146329884
IUPAC Name3-methyl-6-(propan-2-yl)cyclohexane-1,2-diol
Traditional Name3-isopropyl-6-methylcyclohexane-1,2-diol
CAS Registry Number51745-21-2
SMILES
CC(C)C1CCC(C)C(O)C1O
InChI Identifier
InChI=1S/C10H20O2/c1-6(2)8-5-4-7(3)9(11)10(8)12/h6-12H,4-5H2,1-3H3
InChI KeyWQFGPARDTSBVLU-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as menthane monoterpenoids. These are monoterpenoids with a structure based on the o-, m-, or p-menthane backbone. P-menthane consists of the cyclohexane ring with a methyl group and a (2-methyl)-propyl group at the 1 and 4 ring position, respectively. The o- and m- menthanes are much rarer, and presumably arise by alkyl migration of p-menthanes.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassMonoterpenoids
Direct ParentMenthane monoterpenoids
Alternative Parents
Substituents
  • P-menthane monoterpenoid
  • Monocyclic monoterpenoid
  • Cyclohexanol
  • Cyclic alcohol
  • Secondary alcohol
  • 1,2-diol
  • Organic oxygen compound
  • Hydrocarbon derivative
  • Organooxygen compound
  • Alcohol
  • Aliphatic homomonocyclic compound
Molecular FrameworkAliphatic homomonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Biological locationRoute of exposureSource
Process
Naturally occurring process
Role
Biological roleIndustrial application
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility19.1 g/LALOGPS
logP1.37ALOGPS
logP1.67ChemAxon
logS-0.96ALOGPS
pKa (Strongest Acidic)13.66ChemAxon
pKa (Strongest Basic)-3.3ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count2ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area40.46 ŲChemAxon
Rotatable Bond Count1ChemAxon
Refractivity48.73 m³·mol⁻¹ChemAxon
Polarizability20.48 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+138.40231661259
DarkChem[M-H]-133.27531661259
DeepCCS[M+H]+144.89230932474
DeepCCS[M-H]-142.24430932474
DeepCCS[M-2H]-178.64430932474
DeepCCS[M+Na]+154.02730932474
AllCCS[M+H]+140.532859911
AllCCS[M+H-H2O]+136.332859911
AllCCS[M+NH4]+144.432859911
AllCCS[M+Na]+145.532859911
AllCCS[M-H]-143.632859911
AllCCS[M+Na-2H]-145.032859911
AllCCS[M+HCOO]-146.732859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
(1R,2S,3S,4R)-p-Menthane-2,3-diolCC(C)C1CCC(C)C(O)C1O2283.8Standard polar33892256
(1R,2S,3S,4R)-p-Menthane-2,3-diolCC(C)C1CCC(C)C(O)C1O1269.5Standard non polar33892256
(1R,2S,3S,4R)-p-Menthane-2,3-diolCC(C)C1CCC(C)C(O)C1O1371.8Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
(1R,2S,3S,4R)-p-Menthane-2,3-diol,1TMS,isomer #1CC(C)C1CCC(C)C(O[Si](C)(C)C)C1O1409.0Semi standard non polar33892256
(1R,2S,3S,4R)-p-Menthane-2,3-diol,1TMS,isomer #2CC(C)C1CCC(C)C(O)C1O[Si](C)(C)C1410.9Semi standard non polar33892256
(1R,2S,3S,4R)-p-Menthane-2,3-diol,2TMS,isomer #1CC(C)C1CCC(C)C(O[Si](C)(C)C)C1O[Si](C)(C)C1497.5Semi standard non polar33892256
(1R,2S,3S,4R)-p-Menthane-2,3-diol,1TBDMS,isomer #1CC(C)C1CCC(C)C(O[Si](C)(C)C(C)(C)C)C1O1630.5Semi standard non polar33892256
(1R,2S,3S,4R)-p-Menthane-2,3-diol,1TBDMS,isomer #2CC(C)C1CCC(C)C(O)C1O[Si](C)(C)C(C)(C)C1621.3Semi standard non polar33892256
(1R,2S,3S,4R)-p-Menthane-2,3-diol,2TBDMS,isomer #1CC(C)C1CCC(C)C(O[Si](C)(C)C(C)(C)C)C1O[Si](C)(C)C(C)(C)C1916.5Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - (1R,2S,3S,4R)-p-Menthane-2,3-diol GC-MS (Non-derivatized) - 70eV, Positivesplash10-0a4l-9600000000-20d08a1b754066a02c362017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (1R,2S,3S,4R)-p-Menthane-2,3-diol GC-MS (2 TMS) - 70eV, Positivesplash10-0uml-9453000000-1b73bad76d57c6a7bb492017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (1R,2S,3S,4R)-p-Menthane-2,3-diol GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (1R,2S,3S,4R)-p-Menthane-2,3-diol 10V, Positive-QTOFsplash10-00di-0900000000-06f3a7a46be6c21b12b52016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (1R,2S,3S,4R)-p-Menthane-2,3-diol 20V, Positive-QTOFsplash10-05fr-4900000000-fec1aa97b2de6ee1215f2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (1R,2S,3S,4R)-p-Menthane-2,3-diol 40V, Positive-QTOFsplash10-0aor-9100000000-8f9f0f388b5122a4dc5d2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (1R,2S,3S,4R)-p-Menthane-2,3-diol 10V, Negative-QTOFsplash10-00di-0900000000-21e799700999988cff4d2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (1R,2S,3S,4R)-p-Menthane-2,3-diol 20V, Negative-QTOFsplash10-00di-1900000000-50d96de8535bba7934fc2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (1R,2S,3S,4R)-p-Menthane-2,3-diol 40V, Negative-QTOFsplash10-0c00-5900000000-4e16afe1e6f76a78d45e2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (1R,2S,3S,4R)-p-Menthane-2,3-diol 10V, Positive-QTOFsplash10-074i-0900000000-e2706c5fc9a7ede8b9c92021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (1R,2S,3S,4R)-p-Menthane-2,3-diol 20V, Positive-QTOFsplash10-0a4u-9600000000-6847ad99c6c9c48e960f2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (1R,2S,3S,4R)-p-Menthane-2,3-diol 40V, Positive-QTOFsplash10-052f-9000000000-f57c72db5b04ed3337da2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (1R,2S,3S,4R)-p-Menthane-2,3-diol 10V, Negative-QTOFsplash10-00di-0900000000-a8e0408c1222d2a73ed72021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (1R,2S,3S,4R)-p-Menthane-2,3-diol 20V, Negative-QTOFsplash10-00di-0900000000-a558e04a05386d569b982021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (1R,2S,3S,4R)-p-Menthane-2,3-diol 40V, Negative-QTOFsplash10-014i-1900000000-ac7a0566bae5c12248392021-09-22Wishart LabView Spectrum

NMR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted 1D NMR13C NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Cytoplasm
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB014447
KNApSAcK IDNot Available
Chemspider ID96446
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound107175
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.