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Human Metabolome Database Version 3.5

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Showing metabocard for 1,3,7-Trimethyluric acid (HMDB02123)

Record Information
Version 3.5
Creation Date 2006-05-22 08:17:37 -0600
Update Date 2013-06-10 10:36:54 -0600
HMDB ID HMDB02123
Secondary Accession Numbers None
Metabolite Identification
Common Name 1,3,7-Trimethyluric acid
Description 1,3,7-Trimethyluric acid is a methyl derivative of uric acid, found occasionally in human urine. 1,3,7-Trimethyluracil is one of the purine components in urinary calculi. Methylated purines originate from the metabolism of methylxanthines (caffeine, theophylline and theobromine). Methyluric acids are indistinguishable from uric acid by simple methods routinely used in clinical laboratories, requiring the use of high-performance liquid chromatography (HPLC). Purine derivatives in urinary calculi could be considered markers of abnormal purine metabolism. The content of a purine derivative in stone depends on its average urinary excretion in the general population, similarity to the chemical structure of uric acid, and content of the latter in stone. This suggests that purines in stones represent a solid solution with uric acid as solvent. It is also plausible that methylxanthines, ubiquitous components of the diet and drugs, are involved in the pathogenesis of urolithiasis. Caffeine is metabolized via successive pathways mainly catalyzed by CYP1A2, xanthine oxidase or N-acetyltransferase-2 to give 14 different metabolites. CYP1A2 activity shows an inter-individual variability among the population. CYP1A2, an isoform of the CYP1A cytochrome P450 super-family, is involved in the metabolism of many drugs and plays a potentially important role in the induction of chemical carcinogenesis. (PMID: 11712316 Link_out, 15833286 Link_out, 3506820 Link_out, 15013152 Link_out).
Structure Thumb
Download: MOL | SDF | SMILES | InChI
Display: 2D Structure | 3D Structure
Synonyms
  1. 1,3, 7-Trimethyluric acid
  2. 1,3,7-Trimethyl-7,9-dihydro-1H-purine-2,6,8(3H)-trione
  3. 1,3,7-Trimethylurate
  4. 2,6,8-Trihydroxy-1,3,7-trimethylpurine
  5. 7,9-Dihydro-1,3,7-trimethyl-1H-purine-2,6,8(3H)-trione
  6. 8-Hydroxy-1,3,7-trimethyl-3,7-dihydro-1H-purine-2,6-dione
  7. 8-Oxy-caffeine
  8. Trimethyl uric acid
Chemical Formula C8H10N4O3
Average Molecular Weight 210.19
Monoisotopic Molecular Weight 210.075290206
IUPAC Name 1,3,7-trimethyl-2,3,6,7,8,9-hexahydro-1H-purine-2,6,8-trione
Traditional IUPAC Name 1,3,7-trimethyl uric acid
CAS Registry Number 5415-44-1
SMILES CN1C(=O)NC2=C1C(=O)N(C)C(=O)N2C
InChI Identifier InChI=1S/C8H10N4O3/c1-10-4-5(9-7(10)14)11(2)8(15)12(3)6(4)13/h1-3H3,(H,9,14)
InChI Key BYXCFUMGEBZDDI-UHFFFAOYSA-N
Chemical Taxonomy
Kingdom Organic Compounds
Super Class Aromatic Heteropolycyclic Compounds
Class Imidazopyrimidines
Sub Class Purines and Purine Derivatives
Other Descriptors
  • Organic Compounds
  • Purine alkaloids(KEGG)
  • Purinones
  • a small molecule(Cyc)
  • oxopurine(ChEBI)
Substituents
  • Imidazole
  • Pyrimidine
  • Pyrimidone
Direct Parent Xanthines
Ontology
Status Detected and Quantified
Origin
  • Drug metabolite
  • Endogenous
Biofunction
  • Waste products
Application Not Available
Cellular locations
  • Cytoplasm
Physical Properties
State Solid
Experimental Properties
Property Value Reference
Melting Point Not Available Not Available
Boiling Point Not Available Not Available
Water Solubility 5.5 mg/mL at 15 °C Not Available
LogP -0.37 GASPARI,F & BONATI,M (1987)
Predicted Properties
Property Value Source
Water Solubility 28.3 g/L ALOGPS
LogP -0.49 ALOGPS
LogP -0.87 ChemAxon
LogS -0.87 ALOGPS
pKa (strongest acidic) 8.46 ChemAxon
pKa (strongest basic) -5.7 ChemAxon
Hydrogen Acceptor Count 3 ChemAxon
Hydrogen Donor Count 1 ChemAxon
Polar Surface Area 72.96 A2 ChemAxon
Rotatable Bond Count 0 ChemAxon
Refractivity 60.32 ChemAxon
Polarizability 19.82 ChemAxon
Formal Charge 0 ChemAxon
Physiological Charge 0 ChemAxon
Spectra
1H NMR Spectrum
MS/MS Spectrum Quattro_QQQ 10
MS/MS Spectrum Quattro_QQQ 25
MS/MS Spectrum Quattro_QQQ 40
[1H,13C] 2D NMR Spectrum
Biological Properties
Cellular Locations
  • Cytoplasm
Biofluid Locations
  • Blood
  • Urine
Tissue Location
  • Kidney
  • Liver
Pathways Not Available
Normal Concentrations
Biofluid Status Value Age Sex Condition Reference
Blood Expected but not Quantified
Not Applicable Not Available Not Available Comment Normal
Urine Detected and Quantified
0.63 (0.63-0.93) umol/mmol creatinine Adult (>18 years old) Both Normal
Abnormal Concentrations
Biofluid Status Value Age Sex Condition Reference
Urine Detected and Quantified 2.19 (0.0-5.0) umol/mmol creatinine Adult (>18 years old) Both Comment Asthma
Associated Disorders and Diseases
Disease References
Asthma
  • Zydron M, Baranowski J, Baranowska I: Separation, pre-concentration, and HPLC analysis of methylxanthines in urine samples. J Sep Sci. 2004 Oct;27(14):1166-72. Pubmed: 15537072 Link_out
    Associated OMIM IDs
    DrugBank ID Not Available
    DrugBank Metabolite ID Not Available
    Phenol Explorer Compound ID Not Available
    Phenol Explorer Metabolite ID Not Available
    FoodDB ID FDB022854
    KNApSAcK ID Not Available
    Chemspider ID 71754 Link_out
    KEGG Compound ID C16361 Link_out
    BioCyc ID Not Available
    BiGG ID Not Available
    Wikipedia Link Not Available
    NuGOwiki Link HMDB02123 Link_out
    Metagene Link HMDB02123 Link_out
    METLIN ID Not Available
    PubChem Compound 79437 Link_out
    PDB ID Not Available
    ChEBI ID 691622 Link_out
    References
    Synthesis Reference Not Available
    Material Safety Data Sheet (MSDS) Download (PDF)
    General References
    1. Safranow K: [Identification and quantitation of purine derivatives in urinary calculi as markers of abnormal purine metabolism by using high-performance liquid chromatography (HPLC)]. Ann Acad Med Stetin. 2000;46:35-49. Pubmed: 11712316 Link_out
    2. Safranow K, Machoy Z: Simultaneous determination of 16 purine derivatives in urinary calculi by gradient reversed-phase high-performance liquid chromatography with UV detection. J Chromatogr B Analyt Technol Biomed Life Sci. 2005 May 25;819(2):229-35. Pubmed: 15833286 Link_out
    3. Morris GS, Simmonds HA, Davies PM: Use of biological fluids for the rapid diagnosis of potentially lethal inherited disorders of human purine and pyrimidine metabolism. Biomed Chromatogr. 1986 Jun;1(3):109-18. Pubmed: 3506820 Link_out
    4. Caubet MS, Comte B, Brazier JL: Determination of urinary 13C-caffeine metabolites by liquid chromatography-mass spectrometry: the use of metabolic ratios to assess CYP1A2 activity. J Pharm Biomed Anal. 2004 Feb 4;34(2):379-89. Pubmed: 15013152 Link_out