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Record Information

Version

5.0

Status

Expected but not Quantified

Creation Date

2019-10-08 19:43:02 UTC

Update Date

2022-03-07 03:18:18 UTC

HMDB ID

HMDB0240508

Secondary Accession Numbers

None

Metabolite Identification

Common Name

Epicatechin 3'-sulfate

Description

{2-hydroxy-5-[(2R,3R)-3,5,7-trihydroxy-3,4-dihydro-2H-1-benzopyran-2-yl]phenyl}oxidanesulfonic acid belongs to the class of organic compounds known as catechins. Catechins are compounds containing a catechin moiety, which is a 3,4-dihydro-2-chromene-3,5.7-tiol. Based on a literature review very few articles have been published on {2-hydroxy-5-[(2R,3R)-3,5,7-trihydroxy-3,4-dihydro-2H-1-benzopyran-2-yl]phenyl}oxidanesulfonic acid.

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI


  Mrv1652310081921432D          

 27 29  0  0  1  0            999 V2000
    4.2868   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -0.4125    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.1434   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -1.2375    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.0000   -1.6500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -2.8875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.8250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302    0.4125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.2552   -0.4125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.6052   -0.4125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -1.6500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -0.4125    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -0.8250    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -2.0625    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  2  0  0  0  0
  7  1  1  0  0  0  0
  7  3  2  0  0  0  0
  8  4  2  0  0  0  0
  8  5  1  0  0  0  0
  9  6  1  0  0  0  0
 10  2  1  0  0  0  0
 11  4  1  0  0  0  0
 11  9  2  0  0  0  0
 12  6  1  0  0  0  0
 13  5  2  0  0  0  0
 13  9  1  0  0  0  0
 14  3  1  0  0  0  0
 14 10  2  0  0  0  0
 15  7  1  1  0  0  0
 15 12  1  0  0  0  0
 16  8  1  0  0  0  0
 17 10  1  0  0  0  0
 18 11  1  0  0  0  0
 12 19  1  1  0  0  0
 23 13  1  0  0  0  0
 23 15  1  0  0  0  0
 24 14  1  0  0  0  0
 25 20  1  0  0  0  0
 25 21  2  0  0  0  0
 25 22  2  0  0  0  0
 25 24  1  0  0  0  0
 12 26  1  6  0  0  0
 15 27  1  6  0  0  0
M  END

HMDB0240508
     RDKit          3D
Epicatechin 3'-sulfate
 39 41  0  0  0  0  0  0  0  0999 V2000
    4.3789   -1.4888   -2.5117 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.9767   -1.4844   -1.1289 S   0  0  0  0  0  6  0  0  0  0  0  0
    6.0145   -2.5291   -0.9490 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.6908    0.0267   -0.9061 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7450   -1.6157    0.0666 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9180   -0.5145    0.2521 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7437   -0.3400   -0.4481 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9217    0.7787   -0.2470 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2921    0.8102   -1.0779 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.8464   -0.4936   -1.0669 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0715   -0.7865   -0.4531 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7180   -1.9756   -0.7165 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9212   -2.3014   -0.1348 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5876   -3.5027   -0.3927 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4984   -1.4152    0.7366 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8717   -0.1936    1.0312 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5168    0.6485    1.9222 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6718    0.0883    0.4263 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9512    1.3590    0.6839 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3465    1.7617   -0.6662 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.0416    3.0918   -0.7449 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2631    1.7369    0.6563 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4461    1.5757    1.3720 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2437    0.4725    1.1646 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4159    0.3424    1.8941 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.5466   -0.0135   -0.4487 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4792   -1.1162   -1.1715 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0219    1.0524   -2.1189 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2583   -2.6692   -1.4035 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2106   -4.1939   -1.0257 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4455   -1.6667    1.1974 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1189    1.5314    2.1766 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5910    2.1422    1.0796 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1419    1.1179    1.4289 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2036    1.6011   -1.3895 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8530    3.6379   -0.7627 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6235    2.5946    0.8013 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6864    2.3559    2.0812 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0420   -0.4251    1.7997 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0
  2  3  2  0
  2  4  1  0
  2  5  1  0
  5  6  1  0
  6  7  2  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  2  0
 12 13  1  0
 13 14  1  0
 13 15  2  0
 15 16  1  0
 16 17  1  0
 16 18  2  0
 18 19  1  0
 19 20  1  0
 20 21  1  0
  8 22  2  0
 22 23  1  0
 23 24  2  0
 24 25  1  0
 24  6  1  0
 20  9  1  0
 18 11  1  0
  4 26  1  0
  7 27  1  0
  9 28  1  6
 12 29  1  0
 14 30  1  0
 15 31  1  0
 17 32  1  0
 19 33  1  0
 19 34  1  0
 20 35  1  6
 21 36  1  0
 22 37  1  0
 23 38  1  0
 25 39  1  0
M  END


  Mrv1652310081921432D          

 27 29  0  0  1  0            999 V2000
    4.2868   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -0.4125    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.1434   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -1.2375    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.0000   -1.6500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -2.8875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.8250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302    0.4125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.2552   -0.4125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.6052   -0.4125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -1.6500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -0.4125    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -0.8250    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -2.0625    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  2  0  0  0  0
  7  1  1  0  0  0  0
  7  3  2  0  0  0  0
  8  4  2  0  0  0  0
  8  5  1  0  0  0  0
  9  6  1  0  0  0  0
 10  2  1  0  0  0  0
 11  4  1  0  0  0  0
 11  9  2  0  0  0  0
 12  6  1  0  0  0  0
 13  5  2  0  0  0  0
 13  9  1  0  0  0  0
 14  3  1  0  0  0  0
 14 10  2  0  0  0  0
 15  7  1  1  0  0  0
 15 12  1  0  0  0  0
 16  8  1  0  0  0  0
 17 10  1  0  0  0  0
 18 11  1  0  0  0  0
 12 19  1  1  0  0  0
 23 13  1  0  0  0  0
 23 15  1  0  0  0  0
 24 14  1  0  0  0  0
 25 20  1  0  0  0  0
 25 21  2  0  0  0  0
 25 22  2  0  0  0  0
 25 24  1  0  0  0  0
 12 26  1  6  0  0  0
 15 27  1  6  0  0  0
M  END
> <DATABASE_ID>
HMDB0240508

> <DATABASE_NAME>
hmdb

> <SMILES>
[H][C@@]1(O)CC2=C(O)C=C(O)C=C2O[C@]1([H])C1=CC(OS(O)(=O)=O)=C(O)C=C1

> <INCHI_IDENTIFIER>
InChI=1S/C15H14O9S/c16-8-4-11(18)9-6-12(19)15(23-13(9)5-8)7-1-2-10(17)14(3-7)24-25(20,21)22/h1-5,12,15-19H,6H2,(H,20,21,22)/t12-,15-/m1/s1

> <INCHI_KEY>
VBSMBNMUYITMLB-IUODEOHRSA-N

> <FORMULA>
C15H14O9S

> <MOLECULAR_WEIGHT>
370.33

> <EXACT_MASS>
370.035853205

> <JCHEM_ACCEPTOR_COUNT>
8

> <JCHEM_ATOM_COUNT>
39

> <JCHEM_AVERAGE_POLARIZABILITY>
33.61935898118152

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
5

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
{2-hydroxy-5-[(2R,3R)-3,5,7-trihydroxy-3,4-dihydro-2H-1-benzopyran-2-yl]phenyl}oxidanesulfonic acid

> <ALOGPS_LOGP>
0.01

> <JCHEM_LOGP>
-0.08536029932461343

> <ALOGPS_LOGS>
-2.43

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
9.352866715133281

> <JCHEM_PKA_STRONGEST_ACIDIC>
-2.331127408687398

> <JCHEM_PKA_STRONGEST_BASIC>
-3.2940776371722995

> <JCHEM_POLAR_SURFACE_AREA>
153.74999999999997

> <JCHEM_REFRACTIVITY>
83.9915

> <JCHEM_ROTATABLE_BOND_COUNT>
3

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.38e+00 g/l

> <JCHEM_TRADITIONAL_IUPAC>
{2-hydroxy-5-[(2R,3R)-3,5,7-trihydroxy-3,4-dihydro-2H-1-benzopyran-2-yl]phenyl}oxidanesulfonic acid

> <JCHEM_VEBER_RULE>
0

$$$$

HMDB0240508
     RDKit          3D
Epicatechin 3'-sulfate
 39 41  0  0  0  0  0  0  0  0999 V2000
    4.3789   -1.4888   -2.5117 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.9767   -1.4844   -1.1289 S   0  0  0  0  0  6  0  0  0  0  0  0
    6.0145   -2.5291   -0.9490 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.6908    0.0267   -0.9061 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7450   -1.6157    0.0666 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9180   -0.5145    0.2521 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7437   -0.3400   -0.4481 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9217    0.7787   -0.2470 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2921    0.8102   -1.0779 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.8464   -0.4936   -1.0669 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0715   -0.7865   -0.4531 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7180   -1.9756   -0.7165 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9212   -2.3014   -0.1348 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5876   -3.5027   -0.3927 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4984   -1.4152    0.7366 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8717   -0.1936    1.0312 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5168    0.6485    1.9222 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6718    0.0883    0.4263 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9512    1.3590    0.6839 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3465    1.7617   -0.6662 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.0416    3.0918   -0.7449 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2631    1.7369    0.6563 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4461    1.5757    1.3720 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2437    0.4725    1.1646 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4159    0.3424    1.8941 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.5466   -0.0135   -0.4487 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4792   -1.1162   -1.1715 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0219    1.0524   -2.1189 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2583   -2.6692   -1.4035 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2106   -4.1939   -1.0257 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4455   -1.6667    1.1974 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1189    1.5314    2.1766 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5910    2.1422    1.0796 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1419    1.1179    1.4289 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2036    1.6011   -1.3895 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8530    3.6379   -0.7627 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6235    2.5946    0.8013 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6864    2.3559    2.0812 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0420   -0.4251    1.7997 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0
  2  3  2  0
  2  4  1  0
  2  5  1  0
  5  6  1  0
  6  7  2  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  2  0
 12 13  1  0
 13 14  1  0
 13 15  2  0
 15 16  1  0
 16 17  1  0
 16 18  2  0
 18 19  1  0
 19 20  1  0
 20 21  1  0
  8 22  2  0
 22 23  1  0
 23 24  2  0
 24 25  1  0
 24  6  1  0
 20  9  1  0
 18 11  1  0
  4 26  1  0
  7 27  1  0
  9 28  1  6
 12 29  1  0
 14 30  1  0
 15 31  1  0
 17 32  1  0
 19 33  1  0
 19 34  1  0
 20 35  1  6
 21 36  1  0
 22 37  1  0
 23 38  1  0
 25 39  1  0
M  END

HEADER    PROTEIN                                 08-OCT-19   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   08-OCT-19         0                                  
HETATM    1  C   UNK     0       8.002  -4.620   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       9.336  -5.390   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       9.336  -2.310   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       1.334  -0.770   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       2.667  -3.080   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       5.335   0.000   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       8.002  -3.080   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       1.334  -2.310   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       4.001  -0.770   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      10.669  -4.620   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       2.667   0.000   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       6.668  -0.770   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       4.001  -2.310   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      10.669  -3.080   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       6.668  -2.310   0.000  0.00  0.00           C+0
HETATM   16  O   UNK     0       0.000  -3.080   0.000  0.00  0.00           O+0
HETATM   17  O   UNK     0      12.003  -5.390   0.000  0.00  0.00           O+0
HETATM   18  O   UNK     0       2.667   1.540   0.000  0.00  0.00           O+0
HETATM   19  O   UNK     0       8.002  -0.000   0.000  0.00  0.00           O+0
HETATM   20  O   UNK     0      12.003   0.770   0.000  0.00  0.00           O+0
HETATM   21  O   UNK     0      13.543  -0.770   0.000  0.00  0.00           O+0
HETATM   22  O   UNK     0      10.463  -0.770   0.000  0.00  0.00           O+0
HETATM   23  O   UNK     0       5.335  -3.080   0.000  0.00  0.00           O+0
HETATM   24  O   UNK     0      12.003  -2.310   0.000  0.00  0.00           O+0
HETATM   25  S   UNK     0      12.003  -0.770   0.000  0.00  0.00           S+0
HETATM   26  H   UNK     0       8.002  -1.540   0.000  0.00  0.00           H+0
HETATM   27  H   UNK     0       6.668  -3.850   0.000  0.00  0.00           H+0
CONECT    1    2    7                                                       
CONECT    2    1   10                                                       
CONECT    3    7   14                                                       
CONECT    4    8   11                                                       
CONECT    5    8   13                                                       
CONECT    6    9   12                                                       
CONECT    7    1    3   15                                                  
CONECT    8    4    5   16                                                  
CONECT    9    6   11   13                                                  
CONECT   10    2   14   17                                                  
CONECT   11    4    9   18                                                  
CONECT   12    6   15   19   26                                             
CONECT   13    5    9   23                                                  
CONECT   14    3   10   24                                                  
CONECT   15    7   12   23   27                                             
CONECT   16    8                                                            
CONECT   17   10                                                            
CONECT   18   11                                                            
CONECT   19   12                                                            
CONECT   20   25                                                            
CONECT   21   25                                                            
CONECT   22   25                                                            
CONECT   23   13   15                                                       
CONECT   24   14   25                                                       
CONECT   25   20   21   22   24                                             
CONECT   26   12                                                            
CONECT   27   15                                                            
MASTER        0    0    0    0    0    0    0    0   27    0   58    0
END

COMPND    HMDB0240508
HETATM    1  O1  UNL     1       4.379  -1.489  -2.512  1.00  0.00           O  
HETATM    2  S1  UNL     1       4.977  -1.484  -1.129  1.00  0.00           S  
HETATM    3  O2  UNL     1       6.015  -2.529  -0.949  1.00  0.00           O  
HETATM    4  O3  UNL     1       5.691   0.027  -0.906  1.00  0.00           O  
HETATM    5  O4  UNL     1       3.745  -1.616   0.067  1.00  0.00           O  
HETATM    6  C1  UNL     1       2.918  -0.514   0.252  1.00  0.00           C  
HETATM    7  C2  UNL     1       1.744  -0.340  -0.448  1.00  0.00           C  
HETATM    8  C3  UNL     1       0.922   0.779  -0.247  1.00  0.00           C  
HETATM    9  C4  UNL     1      -0.292   0.810  -1.078  1.00  0.00           C  
HETATM   10  O5  UNL     1      -0.846  -0.494  -1.067  1.00  0.00           O  
HETATM   11  C5  UNL     1      -2.071  -0.786  -0.453  1.00  0.00           C  
HETATM   12  C6  UNL     1      -2.718  -1.976  -0.717  1.00  0.00           C  
HETATM   13  C7  UNL     1      -3.921  -2.301  -0.135  1.00  0.00           C  
HETATM   14  O6  UNL     1      -4.588  -3.503  -0.393  1.00  0.00           O  
HETATM   15  C8  UNL     1      -4.498  -1.415   0.737  1.00  0.00           C  
HETATM   16  C9  UNL     1      -3.872  -0.194   1.031  1.00  0.00           C  
HETATM   17  O7  UNL     1      -4.517   0.649   1.922  1.00  0.00           O  
HETATM   18  C10 UNL     1      -2.672   0.088   0.426  1.00  0.00           C  
HETATM   19  C11 UNL     1      -1.951   1.359   0.684  1.00  0.00           C  
HETATM   20  C12 UNL     1      -1.347   1.762  -0.666  1.00  0.00           C  
HETATM   21  O8  UNL     1      -1.042   3.092  -0.745  1.00  0.00           O  
HETATM   22  C13 UNL     1       1.263   1.737   0.656  1.00  0.00           C  
HETATM   23  C14 UNL     1       2.446   1.576   1.372  1.00  0.00           C  
HETATM   24  C15 UNL     1       3.244   0.473   1.165  1.00  0.00           C  
HETATM   25  O9  UNL     1       4.416   0.342   1.894  1.00  0.00           O  
HETATM   26  H1  UNL     1       6.547  -0.013  -0.449  1.00  0.00           H  
HETATM   27  H2  UNL     1       1.479  -1.116  -1.171  1.00  0.00           H  
HETATM   28  H3  UNL     1       0.022   1.052  -2.119  1.00  0.00           H  
HETATM   29  H4  UNL     1      -2.258  -2.669  -1.404  1.00  0.00           H  
HETATM   30  H5  UNL     1      -4.211  -4.194  -1.026  1.00  0.00           H  
HETATM   31  H6  UNL     1      -5.445  -1.667   1.197  1.00  0.00           H  
HETATM   32  H7  UNL     1      -4.119   1.531   2.177  1.00  0.00           H  
HETATM   33  H8  UNL     1      -2.591   2.142   1.080  1.00  0.00           H  
HETATM   34  H9  UNL     1      -1.142   1.118   1.429  1.00  0.00           H  
HETATM   35  H10 UNL     1      -2.204   1.601  -1.390  1.00  0.00           H  
HETATM   36  H11 UNL     1      -1.853   3.638  -0.763  1.00  0.00           H  
HETATM   37  H12 UNL     1       0.624   2.595   0.801  1.00  0.00           H  
HETATM   38  H13 UNL     1       2.686   2.356   2.081  1.00  0.00           H  
HETATM   39  H14 UNL     1       5.042  -0.425   1.800  1.00  0.00           H  
CONECT    1    2    2
CONECT    2    3    3    4    5
CONECT    4   26
CONECT    5    6
CONECT    6    7    7   24
CONECT    7    8   27
CONECT    8    9   22   22
CONECT    9   10   20   28
CONECT   10   11
CONECT   11   12   12   18
CONECT   12   13   29
CONECT   13   14   15   15
CONECT   14   30
CONECT   15   16   31
CONECT   16   17   18   18
CONECT   17   32
CONECT   18   19
CONECT   19   20   33   34
CONECT   20   21   35
CONECT   21   36
CONECT   22   23   37
CONECT   23   24   24   38
CONECT   24   25
CONECT   25   39
END

HMDB0240508
     RDKit          3D
Epicatechin 3'-sulfate
 39 41  0  0  0  0  0  0  0  0999 V2000
    4.3789   -1.4888   -2.5117 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.9767   -1.4844   -1.1289 S   0  0  0  0  0  6  0  0  0  0  0  0
    6.0145   -2.5291   -0.9490 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.6908    0.0267   -0.9061 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7450   -1.6157    0.0666 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9180   -0.5145    0.2521 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7437   -0.3400   -0.4481 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9217    0.7787   -0.2470 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2921    0.8102   -1.0779 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.8464   -0.4936   -1.0669 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0715   -0.7865   -0.4531 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7180   -1.9756   -0.7165 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9212   -2.3014   -0.1348 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5876   -3.5027   -0.3927 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4984   -1.4152    0.7366 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8717   -0.1936    1.0312 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5168    0.6485    1.9222 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6718    0.0883    0.4263 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9512    1.3590    0.6839 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3465    1.7617   -0.6662 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.0416    3.0918   -0.7449 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2631    1.7369    0.6563 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4461    1.5757    1.3720 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2437    0.4725    1.1646 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4159    0.3424    1.8941 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.5466   -0.0135   -0.4487 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4792   -1.1162   -1.1715 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0219    1.0524   -2.1189 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2583   -2.6692   -1.4035 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2106   -4.1939   -1.0257 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4455   -1.6667    1.1974 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1189    1.5314    2.1766 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5910    2.1422    1.0796 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1419    1.1179    1.4289 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2036    1.6011   -1.3895 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8530    3.6379   -0.7627 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6235    2.5946    0.8013 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6864    2.3559    2.0812 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0420   -0.4251    1.7997 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0
  2  3  2  0
  2  4  1  0
  2  5  1  0
  5  6  1  0
  6  7  2  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  2  0
 12 13  1  0
 13 14  1  0
 13 15  2  0
 15 16  1  0
 16 17  1  0
 16 18  2  0
 18 19  1  0
 19 20  1  0
 20 21  1  0
  8 22  2  0
 22 23  1  0
 23 24  2  0
 24 25  1  0
 24  6  1  0
 20  9  1  0
 18 11  1  0
  4 26  1  0
  7 27  1  0
  9 28  1  6
 12 29  1  0
 14 30  1  0
 15 31  1  0
 17 32  1  0
 19 33  1  0
 19 34  1  0
 20 35  1  6
 21 36  1  0
 22 37  1  0
 23 38  1  0
 25 39  1  0
M  END

View in JSmol View NMR Assignments View Stereo Labels

Synonyms

Value	Source
{2-hydroxy-5-[(2R,3R)-3,5,7-trihydroxy-3,4-dihydro-2H-1-benzopyran-2-yl]phenyl}oxidanesulfonate	Generator
{2-hydroxy-5-[(2R,3R)-3,5,7-trihydroxy-3,4-dihydro-2H-1-benzopyran-2-yl]phenyl}oxidanesulphonate	Generator
{2-hydroxy-5-[(2R,3R)-3,5,7-trihydroxy-3,4-dihydro-2H-1-benzopyran-2-yl]phenyl}oxidanesulphonic acid	Generator
Epicatechin 3'-sulfuric acid	Generator
Epicatechin 3'-sulphate	Generator
Epicatechin 3'-sulphuric acid	Generator

Chemical Formula

C₁₅H₁₄O₉S

Average Molecular Weight

370.33

Monoisotopic Molecular Weight

370.035853205

IUPAC Name

{2-hydroxy-5-[(2R,3R)-3,5,7-trihydroxy-3,4-dihydro-2H-1-benzopyran-2-yl]phenyl}oxidanesulfonic acid

Traditional Name

{2-hydroxy-5-[(2R,3R)-3,5,7-trihydroxy-3,4-dihydro-2H-1-benzopyran-2-yl]phenyl}oxidanesulfonic acid

CAS Registry Number

Not Available

SMILES

[H][C@@]1(O)CC2=C(O)C=C(O)C=C2O[C@]1([H])C1=CC(OS(O)(=O)=O)=C(O)C=C1

InChI Identifier

InChI=1S/C15H14O9S/c16-8-4-11(18)9-6-12(19)15(23-13(9)5-8)7-1-2-10(17)14(3-7)24-25(20,21)22/h1-5,12,15-19H,6H2,(H,20,21,22)/t12-,15-/m1/s1

InChI Key

VBSMBNMUYITMLB-IUODEOHRSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as catechins. Catechins are compounds containing a catechin moiety, which is a 3,4-dihydro-2-chromene-3,5.7-Tiol.

Kingdom

Organic compounds

Super Class

Phenylpropanoids and polyketides

Class

Flavonoids

Sub Class

Flavans

Direct Parent

Catechins

Alternative Parents

Substituents

Catechin
3-hydroxyflavonoid
4'-hydroxyflavonoid
5-hydroxyflavonoid
7-hydroxyflavonoid
Hydroxyflavonoid
Phenylsulfate
Chromane
Benzopyran
Arylsulfate
1-benzopyran
Phenoxy compound
Alkyl aryl ether
Phenol
1-hydroxy-2-unsubstituted benzenoid
1-hydroxy-4-unsubstituted benzenoid
Benzenoid
Sulfate-ester
Sulfuric acid monoester
Sulfuric acid ester
Monocyclic benzene moiety
Organic sulfuric acid or derivatives
Secondary alcohol
Oxacycle
Organoheterocyclic compound
Polyol
Ether
Hydrocarbon derivative
Alcohol
Organooxygen compound
Organic oxygen compound
Organic oxide
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Ontology

Not Available

Not Available

Not Available

Not Available

Physical Properties

State

Not Available

Experimental Molecular Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Experimental Chromatographic Properties

Not Available

Predicted Molecular Properties

Property	Value	Source
logP	0.01	ALOGPS
logP	-0.085	ChemAxon
logS	-2.4	ALOGPS
pKa (Strongest Acidic)	-2.3	ChemAxon
pKa (Strongest Basic)	-3.3	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	8	ChemAxon
Hydrogen Donor Count	5	ChemAxon
Polar Surface Area	153.75 Å²	ChemAxon
Rotatable Bond Count	3	ChemAxon
Refractivity	83.99 m³·mol⁻¹	ChemAxon
Polarizability	33.62 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Predicted Chromatographic Properties

Predicted Collision Cross Sections

Predictor	Adduct Type	CCS Value (Å²)	Reference
DeepCCS	[M+H]+	185.84	30932474
DeepCCS	[M-H]-	183.445	30932474
DeepCCS	[M-2H]-	216.328	30932474
DeepCCS	[M+Na]+	191.753	30932474
AllCCS	[M+H]+	183.4	32859911
AllCCS	[M+H-H2O]+	180.3	32859911
AllCCS	[M+NH4]+	186.2	32859911
AllCCS	[M+Na]+	187.0	32859911
AllCCS	[M-H]-	178.2	32859911
AllCCS	[M+Na-2H]-	178.0	32859911
AllCCS	[M+HCOO]-	177.9	32859911

Predicted Kovats Retention Indices

Underivatized

Metabolite	SMILES	Kovats RI Value	Column Type	Reference
Epicatechin 3'-sulfate	[H][C@@]1(O)CC2=C(O)C=C(O)C=C2O[C@]1([H])C1=CC(OS(O)(=O)=O)=C(O)C=C1	5969.9	Standard polar	33892256
Epicatechin 3'-sulfate	[H][C@@]1(O)CC2=C(O)C=C(O)C=C2O[C@]1([H])C1=CC(OS(O)(=O)=O)=C(O)C=C1	3043.3	Standard non polar	33892256
Epicatechin 3'-sulfate	[H][C@@]1(O)CC2=C(O)C=C(O)C=C2O[C@]1([H])C1=CC(OS(O)(=O)=O)=C(O)C=C1	3532.2	Semi standard non polar	33892256

Derivatized

Derivative Name / Structure	SMILES	Kovats RI Value	Column Type	Reference
Epicatechin 3'-sulfate,1TMS,isomer #1	C[Si](C)(C)O[C@@H]1CC2=C(O)C=C(O)C=C2O[C@@H]1C1=CC=C(O)C(OS(=O)(=O)O)=C1	3422.9	Semi standard non polar	33892256
Epicatechin 3'-sulfate,1TMS,isomer #2	C[Si](C)(C)OC1=CC(O)=CC2=C1C[C@@H](O)[C@@H](C1=CC=C(O)C(OS(=O)(=O)O)=C1)O2	3381.2	Semi standard non polar	33892256
Epicatechin 3'-sulfate,1TMS,isomer #3	C[Si](C)(C)OC1=CC(O)=C2C[C@@H](O)[C@@H](C3=CC=C(O)C(OS(=O)(=O)O)=C3)OC2=C1	3428.9	Semi standard non polar	33892256
Epicatechin 3'-sulfate,1TMS,isomer #4	C[Si](C)(C)OC1=CC=C([C@H]2OC3=CC(O)=CC(O)=C3C[C@H]2O)C=C1OS(=O)(=O)O	3387.4	Semi standard non polar	33892256
Epicatechin 3'-sulfate,1TMS,isomer #5	C[Si](C)(C)OS(=O)(=O)OC1=CC([C@H]2OC3=CC(O)=CC(O)=C3C[C@H]2O)=CC=C1O	3503.6	Semi standard non polar	33892256
Epicatechin 3'-sulfate,2TMS,isomer #1	C[Si](C)(C)OC1=CC(O)=CC2=C1C[C@@H](O[Si](C)(C)C)[C@@H](C1=CC=C(O)C(OS(=O)(=O)O)=C1)O2	3301.9	Semi standard non polar	33892256
Epicatechin 3'-sulfate,2TMS,isomer #10	C[Si](C)(C)OC1=CC=C([C@H]2OC3=CC(O)=CC(O)=C3C[C@H]2O)C=C1OS(=O)(=O)O[Si](C)(C)C	3406.0	Semi standard non polar	33892256
Epicatechin 3'-sulfate,2TMS,isomer #2	C[Si](C)(C)OC1=CC(O)=C2C[C@@H](O[Si](C)(C)C)[C@@H](C3=CC=C(O)C(OS(=O)(=O)O)=C3)OC2=C1	3265.6	Semi standard non polar	33892256
Epicatechin 3'-sulfate,2TMS,isomer #3	C[Si](C)(C)OC1=CC=C([C@H]2OC3=CC(O)=CC(O)=C3C[C@H]2O[Si](C)(C)C)C=C1OS(=O)(=O)O	3338.7	Semi standard non polar	33892256
Epicatechin 3'-sulfate,2TMS,isomer #4	C[Si](C)(C)O[C@@H]1CC2=C(O)C=C(O)C=C2O[C@@H]1C1=CC=C(O)C(OS(=O)(=O)O[Si](C)(C)C)=C1	3404.8	Semi standard non polar	33892256
Epicatechin 3'-sulfate,2TMS,isomer #5	C[Si](C)(C)OC1=CC2=C(C[C@@H](O)[C@@H](C3=CC=C(O)C(OS(=O)(=O)O)=C3)O2)C(O[Si](C)(C)C)=C1	3295.6	Semi standard non polar	33892256
Epicatechin 3'-sulfate,2TMS,isomer #6	C[Si](C)(C)OC1=CC=C([C@H]2OC3=CC(O)=CC(O[Si](C)(C)C)=C3C[C@H]2O)C=C1OS(=O)(=O)O	3325.6	Semi standard non polar	33892256
Epicatechin 3'-sulfate,2TMS,isomer #7	C[Si](C)(C)OC1=CC(O)=CC2=C1C[C@@H](O)[C@@H](C1=CC=C(O)C(OS(=O)(=O)O[Si](C)(C)C)=C1)O2	3347.9	Semi standard non polar	33892256
Epicatechin 3'-sulfate,2TMS,isomer #8	C[Si](C)(C)OC1=CC(O)=C2C[C@@H](O)[C@@H](C3=CC=C(O[Si](C)(C)C)C(OS(=O)(=O)O)=C3)OC2=C1	3311.1	Semi standard non polar	33892256
Epicatechin 3'-sulfate,2TMS,isomer #9	C[Si](C)(C)OC1=CC(O)=C2C[C@@H](O)[C@@H](C3=CC=C(O)C(OS(=O)(=O)O[Si](C)(C)C)=C3)OC2=C1	3342.3	Semi standard non polar	33892256
Epicatechin 3'-sulfate,3TMS,isomer #1	C[Si](C)(C)OC1=CC2=C(C[C@@H](O[Si](C)(C)C)[C@@H](C3=CC=C(O)C(OS(=O)(=O)O)=C3)O2)C(O[Si](C)(C)C)=C1	3214.8	Semi standard non polar	33892256
Epicatechin 3'-sulfate,3TMS,isomer #10	C[Si](C)(C)OC1=CC(O)=C2C[C@@H](O)[C@@H](C3=CC=C(O[Si](C)(C)C)C(OS(=O)(=O)O[Si](C)(C)C)=C3)OC2=C1	3261.8	Semi standard non polar	33892256
Epicatechin 3'-sulfate,3TMS,isomer #2	C[Si](C)(C)OC1=CC=C([C@H]2OC3=CC(O)=CC(O[Si](C)(C)C)=C3C[C@H]2O[Si](C)(C)C)C=C1OS(=O)(=O)O	3260.9	Semi standard non polar	33892256
Epicatechin 3'-sulfate,3TMS,isomer #3	C[Si](C)(C)OC1=CC(O)=CC2=C1C[C@@H](O[Si](C)(C)C)[C@@H](C1=CC=C(O)C(OS(=O)(=O)O[Si](C)(C)C)=C1)O2	3256.0	Semi standard non polar	33892256
Epicatechin 3'-sulfate,3TMS,isomer #4	C[Si](C)(C)OC1=CC(O)=C2C[C@@H](O[Si](C)(C)C)[C@@H](C3=CC=C(O[Si](C)(C)C)C(OS(=O)(=O)O)=C3)OC2=C1	3223.9	Semi standard non polar	33892256
Epicatechin 3'-sulfate,3TMS,isomer #5	C[Si](C)(C)OC1=CC(O)=C2C[C@@H](O[Si](C)(C)C)[C@@H](C3=CC=C(O)C(OS(=O)(=O)O[Si](C)(C)C)=C3)OC2=C1	3218.1	Semi standard non polar	33892256
Epicatechin 3'-sulfate,3TMS,isomer #6	C[Si](C)(C)OC1=CC=C([C@H]2OC3=CC(O)=CC(O)=C3C[C@H]2O[Si](C)(C)C)C=C1OS(=O)(=O)O[Si](C)(C)C	3335.3	Semi standard non polar	33892256
Epicatechin 3'-sulfate,3TMS,isomer #7	C[Si](C)(C)OC1=CC2=C(C[C@@H](O)[C@@H](C3=CC=C(O[Si](C)(C)C)C(OS(=O)(=O)O)=C3)O2)C(O[Si](C)(C)C)=C1	3254.2	Semi standard non polar	33892256
Epicatechin 3'-sulfate,3TMS,isomer #8	C[Si](C)(C)OC1=CC2=C(C[C@@H](O)[C@@H](C3=CC=C(O)C(OS(=O)(=O)O[Si](C)(C)C)=C3)O2)C(O[Si](C)(C)C)=C1	3265.2	Semi standard non polar	33892256
Epicatechin 3'-sulfate,3TMS,isomer #9	C[Si](C)(C)OC1=CC=C([C@H]2OC3=CC(O)=CC(O[Si](C)(C)C)=C3C[C@H]2O)C=C1OS(=O)(=O)O[Si](C)(C)C	3271.6	Semi standard non polar	33892256
Epicatechin 3'-sulfate,4TMS,isomer #1	C[Si](C)(C)OC1=CC2=C(C[C@@H](O[Si](C)(C)C)[C@@H](C3=CC=C(O[Si](C)(C)C)C(OS(=O)(=O)O)=C3)O2)C(O[Si](C)(C)C)=C1	3235.3	Semi standard non polar	33892256
Epicatechin 3'-sulfate,4TMS,isomer #2	C[Si](C)(C)OC1=CC2=C(C[C@@H](O[Si](C)(C)C)[C@@H](C3=CC=C(O)C(OS(=O)(=O)O[Si](C)(C)C)=C3)O2)C(O[Si](C)(C)C)=C1	3252.2	Semi standard non polar	33892256
Epicatechin 3'-sulfate,4TMS,isomer #3	C[Si](C)(C)OC1=CC=C([C@H]2OC3=CC(O)=CC(O[Si](C)(C)C)=C3C[C@H]2O[Si](C)(C)C)C=C1OS(=O)(=O)O[Si](C)(C)C	3217.0	Semi standard non polar	33892256
Epicatechin 3'-sulfate,4TMS,isomer #4	C[Si](C)(C)OC1=CC(O)=C2C[C@@H](O[Si](C)(C)C)[C@@H](C3=CC=C(O[Si](C)(C)C)C(OS(=O)(=O)O[Si](C)(C)C)=C3)OC2=C1	3222.4	Semi standard non polar	33892256
Epicatechin 3'-sulfate,4TMS,isomer #5	C[Si](C)(C)OC1=CC2=C(C[C@@H](O)[C@@H](C3=CC=C(O[Si](C)(C)C)C(OS(=O)(=O)O[Si](C)(C)C)=C3)O2)C(O[Si](C)(C)C)=C1	3255.3	Semi standard non polar	33892256
Epicatechin 3'-sulfate,5TMS,isomer #1	C[Si](C)(C)OC1=CC2=C(C[C@@H](O[Si](C)(C)C)[C@@H](C3=CC=C(O[Si](C)(C)C)C(OS(=O)(=O)O[Si](C)(C)C)=C3)O2)C(O[Si](C)(C)C)=C1	3258.7	Semi standard non polar	33892256
Epicatechin 3'-sulfate,5TMS,isomer #1	C[Si](C)(C)OC1=CC2=C(C[C@@H](O[Si](C)(C)C)[C@@H](C3=CC=C(O[Si](C)(C)C)C(OS(=O)(=O)O[Si](C)(C)C)=C3)O2)C(O[Si](C)(C)C)=C1	3514.3	Standard non polar	33892256
Epicatechin 3'-sulfate,5TMS,isomer #1	C[Si](C)(C)OC1=CC2=C(C[C@@H](O[Si](C)(C)C)[C@@H](C3=CC=C(O[Si](C)(C)C)C(OS(=O)(=O)O[Si](C)(C)C)=C3)O2)C(O[Si](C)(C)C)=C1	3724.3	Standard polar	33892256
Epicatechin 3'-sulfate,1TBDMS,isomer #1	CC(C)(C)[Si](C)(C)O[C@@H]1CC2=C(O)C=C(O)C=C2O[C@@H]1C1=CC=C(O)C(OS(=O)(=O)O)=C1	3693.5	Semi standard non polar	33892256
Epicatechin 3'-sulfate,1TBDMS,isomer #2	CC(C)(C)[Si](C)(C)OC1=CC(O)=CC2=C1C[C@@H](O)[C@@H](C1=CC=C(O)C(OS(=O)(=O)O)=C1)O2	3683.1	Semi standard non polar	33892256
Epicatechin 3'-sulfate,1TBDMS,isomer #3	CC(C)(C)[Si](C)(C)OC1=CC(O)=C2C[C@@H](O)[C@@H](C3=CC=C(O)C(OS(=O)(=O)O)=C3)OC2=C1	3707.6	Semi standard non polar	33892256
Epicatechin 3'-sulfate,1TBDMS,isomer #4	CC(C)(C)[Si](C)(C)OC1=CC=C([C@H]2OC3=CC(O)=CC(O)=C3C[C@H]2O)C=C1OS(=O)(=O)O	3705.2	Semi standard non polar	33892256
Epicatechin 3'-sulfate,1TBDMS,isomer #5	CC(C)(C)[Si](C)(C)OS(=O)(=O)OC1=CC([C@H]2OC3=CC(O)=CC(O)=C3C[C@H]2O)=CC=C1O	3773.2	Semi standard non polar	33892256
Epicatechin 3'-sulfate,2TBDMS,isomer #1	CC(C)(C)[Si](C)(C)OC1=CC(O)=CC2=C1C[C@@H](O[Si](C)(C)C(C)(C)C)[C@@H](C1=CC=C(O)C(OS(=O)(=O)O)=C1)O2	3807.3	Semi standard non polar	33892256
Epicatechin 3'-sulfate,2TBDMS,isomer #10	CC(C)(C)[Si](C)(C)OC1=CC=C([C@H]2OC3=CC(O)=CC(O)=C3C[C@H]2O)C=C1OS(=O)(=O)O[Si](C)(C)C(C)(C)C	3922.4	Semi standard non polar	33892256
Epicatechin 3'-sulfate,2TBDMS,isomer #2	CC(C)(C)[Si](C)(C)OC1=CC(O)=C2C[C@@H](O[Si](C)(C)C(C)(C)C)[C@@H](C3=CC=C(O)C(OS(=O)(=O)O)=C3)OC2=C1	3797.4	Semi standard non polar	33892256
Epicatechin 3'-sulfate,2TBDMS,isomer #3	CC(C)(C)[Si](C)(C)OC1=CC=C([C@H]2OC3=CC(O)=CC(O)=C3C[C@H]2O[Si](C)(C)C(C)(C)C)C=C1OS(=O)(=O)O	3853.5	Semi standard non polar	33892256
Epicatechin 3'-sulfate,2TBDMS,isomer #4	CC(C)(C)[Si](C)(C)O[C@@H]1CC2=C(O)C=C(O)C=C2O[C@@H]1C1=CC=C(O)C(OS(=O)(=O)O[Si](C)(C)C(C)(C)C)=C1	3878.7	Semi standard non polar	33892256
Epicatechin 3'-sulfate,2TBDMS,isomer #5	CC(C)(C)[Si](C)(C)OC1=CC2=C(C[C@@H](O)[C@@H](C3=CC=C(O)C(OS(=O)(=O)O)=C3)O2)C(O[Si](C)(C)C(C)(C)C)=C1	3845.1	Semi standard non polar	33892256
Epicatechin 3'-sulfate,2TBDMS,isomer #6	CC(C)(C)[Si](C)(C)OC1=CC=C([C@H]2OC3=CC(O)=CC(O[Si](C)(C)C(C)(C)C)=C3C[C@H]2O)C=C1OS(=O)(=O)O	3838.6	Semi standard non polar	33892256
Epicatechin 3'-sulfate,2TBDMS,isomer #7	CC(C)(C)[Si](C)(C)OC1=CC(O)=CC2=C1C[C@@H](O)[C@@H](C1=CC=C(O)C(OS(=O)(=O)O[Si](C)(C)C(C)(C)C)=C1)O2	3839.4	Semi standard non polar	33892256
Epicatechin 3'-sulfate,2TBDMS,isomer #8	CC(C)(C)[Si](C)(C)OC1=CC(O)=C2C[C@@H](O)[C@@H](C3=CC=C(O[Si](C)(C)C(C)(C)C)C(OS(=O)(=O)O)=C3)OC2=C1	3862.2	Semi standard non polar	33892256
Epicatechin 3'-sulfate,2TBDMS,isomer #9	CC(C)(C)[Si](C)(C)OC1=CC(O)=C2C[C@@H](O)[C@@H](C3=CC=C(O)C(OS(=O)(=O)O[Si](C)(C)C(C)(C)C)=C3)OC2=C1	3859.5	Semi standard non polar	33892256
Epicatechin 3'-sulfate,3TBDMS,isomer #1	CC(C)(C)[Si](C)(C)OC1=CC2=C(C[C@@H](O[Si](C)(C)C(C)(C)C)[C@@H](C3=CC=C(O)C(OS(=O)(=O)O)=C3)O2)C(O[Si](C)(C)C(C)(C)C)=C1	3971.8	Semi standard non polar	33892256
Epicatechin 3'-sulfate,3TBDMS,isomer #10	CC(C)(C)[Si](C)(C)OC1=CC(O)=C2C[C@@H](O)[C@@H](C3=CC=C(O[Si](C)(C)C(C)(C)C)C(OS(=O)(=O)O[Si](C)(C)C(C)(C)C)=C3)OC2=C1	3994.5	Semi standard non polar	33892256
Epicatechin 3'-sulfate,3TBDMS,isomer #2	CC(C)(C)[Si](C)(C)OC1=CC=C([C@H]2OC3=CC(O)=CC(O[Si](C)(C)C(C)(C)C)=C3C[C@H]2O[Si](C)(C)C(C)(C)C)C=C1OS(=O)(=O)O	3935.3	Semi standard non polar	33892256
Epicatechin 3'-sulfate,3TBDMS,isomer #3	CC(C)(C)[Si](C)(C)OC1=CC(O)=CC2=C1C[C@@H](O[Si](C)(C)C(C)(C)C)[C@@H](C1=CC=C(O)C(OS(=O)(=O)O[Si](C)(C)C(C)(C)C)=C1)O2	3924.9	Semi standard non polar	33892256
Epicatechin 3'-sulfate,3TBDMS,isomer #4	CC(C)(C)[Si](C)(C)OC1=CC(O)=C2C[C@@H](O[Si](C)(C)C(C)(C)C)[C@@H](C3=CC=C(O[Si](C)(C)C(C)(C)C)C(OS(=O)(=O)O)=C3)OC2=C1	3937.4	Semi standard non polar	33892256
Epicatechin 3'-sulfate,3TBDMS,isomer #5	CC(C)(C)[Si](C)(C)OC1=CC(O)=C2C[C@@H](O[Si](C)(C)C(C)(C)C)[C@@H](C3=CC=C(O)C(OS(=O)(=O)O[Si](C)(C)C(C)(C)C)=C3)OC2=C1	3935.5	Semi standard non polar	33892256
Epicatechin 3'-sulfate,3TBDMS,isomer #6	CC(C)(C)[Si](C)(C)OC1=CC=C([C@H]2OC3=CC(O)=CC(O)=C3C[C@H]2O[Si](C)(C)C(C)(C)C)C=C1OS(=O)(=O)O[Si](C)(C)C(C)(C)C	3999.0	Semi standard non polar	33892256
Epicatechin 3'-sulfate,3TBDMS,isomer #7	CC(C)(C)[Si](C)(C)OC1=CC2=C(C[C@@H](O)[C@@H](C3=CC=C(O[Si](C)(C)C(C)(C)C)C(OS(=O)(=O)O)=C3)O2)C(O[Si](C)(C)C(C)(C)C)=C1	3998.9	Semi standard non polar	33892256
Epicatechin 3'-sulfate,3TBDMS,isomer #8	CC(C)(C)[Si](C)(C)OC1=CC2=C(C[C@@H](O)[C@@H](C3=CC=C(O)C(OS(=O)(=O)O[Si](C)(C)C(C)(C)C)=C3)O2)C(O[Si](C)(C)C(C)(C)C)=C1	3973.3	Semi standard non polar	33892256
Epicatechin 3'-sulfate,3TBDMS,isomer #9	CC(C)(C)[Si](C)(C)OC1=CC=C([C@H]2OC3=CC(O)=CC(O[Si](C)(C)C(C)(C)C)=C3C[C@H]2O)C=C1OS(=O)(=O)O[Si](C)(C)C(C)(C)C	3965.5	Semi standard non polar	33892256
Epicatechin 3'-sulfate,4TBDMS,isomer #1	CC(C)(C)[Si](C)(C)OC1=CC2=C(C[C@@H](O[Si](C)(C)C(C)(C)C)[C@@H](C3=CC=C(O[Si](C)(C)C(C)(C)C)C(OS(=O)(=O)O)=C3)O2)C(O[Si](C)(C)C(C)(C)C)=C1	4157.0	Semi standard non polar	33892256
Epicatechin 3'-sulfate,4TBDMS,isomer #2	CC(C)(C)[Si](C)(C)OC1=CC2=C(C[C@@H](O[Si](C)(C)C(C)(C)C)[C@@H](C3=CC=C(O)C(OS(=O)(=O)O[Si](C)(C)C(C)(C)C)=C3)O2)C(O[Si](C)(C)C(C)(C)C)=C1	4124.6	Semi standard non polar	33892256
Epicatechin 3'-sulfate,4TBDMS,isomer #3	CC(C)(C)[Si](C)(C)OC1=CC=C([C@H]2OC3=CC(O)=CC(O[Si](C)(C)C(C)(C)C)=C3C[C@H]2O[Si](C)(C)C(C)(C)C)C=C1OS(=O)(=O)O[Si](C)(C)C(C)(C)C	4086.2	Semi standard non polar	33892256
Epicatechin 3'-sulfate,4TBDMS,isomer #4	CC(C)(C)[Si](C)(C)OC1=CC(O)=C2C[C@@H](O[Si](C)(C)C(C)(C)C)[C@@H](C3=CC=C(O[Si](C)(C)C(C)(C)C)C(OS(=O)(=O)O[Si](C)(C)C(C)(C)C)=C3)OC2=C1	4112.9	Semi standard non polar	33892256
Epicatechin 3'-sulfate,4TBDMS,isomer #5	CC(C)(C)[Si](C)(C)OC1=CC2=C(C[C@@H](O)[C@@H](C3=CC=C(O[Si](C)(C)C(C)(C)C)C(OS(=O)(=O)O[Si](C)(C)C(C)(C)C)=C3)O2)C(O[Si](C)(C)C(C)(C)C)=C1	4140.7	Semi standard non polar	33892256

Spectra

GC-MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted GC-MS	Predicted GC-MS Spectrum - Epicatechin 3'-sulfate GC-MS (Non-derivatized) - 70eV, Positive	Not Available	2021-10-12	Wishart Lab	View Spectrum

MS/MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Epicatechin 3'-sulfate 10V, Positive-QTOF	splash10-00di-0419000000-733f9421b77ef24d3ca6	2017-06-28	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Epicatechin 3'-sulfate 20V, Positive-QTOF	splash10-0079-0943000000-376fe3791b3c8fbf64de	2017-06-28	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Epicatechin 3'-sulfate 40V, Positive-QTOF	splash10-00di-4920000000-f97cc5ab1d3985306f0a	2017-06-28	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Epicatechin 3'-sulfate 10V, Negative-QTOF	splash10-014i-0119000000-fa8751803c413b5fee79	2017-06-28	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Epicatechin 3'-sulfate 20V, Negative-QTOF	splash10-000i-0692000000-f56bd436f83cca8b9b53	2017-06-28	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Epicatechin 3'-sulfate 40V, Negative-QTOF	splash10-05e9-3910000000-65d343bcb7e9f25afa20	2017-06-28	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Epicatechin 3'-sulfate 10V, Negative-QTOF	splash10-014i-0009000000-a91a1fb2049b56815009	2021-09-23	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Epicatechin 3'-sulfate 20V, Negative-QTOF	splash10-0uxr-0219000000-111c6d66034c61b4874b	2021-09-23	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Epicatechin 3'-sulfate 40V, Negative-QTOF	splash10-0002-9872000000-9d6737ff8baf073219a0	2021-09-23	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Epicatechin 3'-sulfate 10V, Positive-QTOF	splash10-00di-0019000000-68e36ff4fb81b7986679	2021-09-25	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Epicatechin 3'-sulfate 20V, Positive-QTOF	splash10-0fe0-0932000000-511ef3668b7b845582e2	2021-09-25	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Epicatechin 3'-sulfate 40V, Positive-QTOF	splash10-00dr-0931000000-83ea7bc80c1f506e67aa	2021-09-25	Wishart Lab	View Spectrum

NMR Spectra

Spectrum Type	Description	Deposition Date	Source	View
Predicted 1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 100 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 200 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 300 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 400 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 500 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 600 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 700 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 800 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 900 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Pathways

Not Available

Name	SMPDB/PathBank	KEGG

Normal Concentrations

Not Available

Abnormal Concentrations

Not Available

Associated Disorders and Diseases

Disease References

None

Associated OMIM IDs

None

External Links

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

FDB031350

KNApSAcK ID

Not Available

Chemspider ID

32697455

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

71260094

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

VMH ID

Not Available

MarkerDB ID

Not Available

Good Scents ID

Not Available

References

Synthesis Reference

Not Available

Material Safety Data Sheet (MSDS)

Not Available

General References

Not Available

Showing metabocard for Epicatechin 3'-sulfate (HMDB0240508)

MOL for HMDB0240508 (Epicatechin 3'-sulfate)

3D MOL for HMDB0240508 (Epicatechin 3'-sulfate)

3D SDF for HMDB0240508 (Epicatechin 3'-sulfate)

3D-SDF for HMDB0240508 (Epicatechin 3'-sulfate)

PDB for HMDB0240508 (Epicatechin 3'-sulfate)

3D PDB for HMDB0240508 (Epicatechin 3'-sulfate)

SMILES for HMDB0240508 (Epicatechin 3'-sulfate)

INCHI for HMDB0240508 (Epicatechin 3'-sulfate)

Structure for HMDB0240508 (Epicatechin 3'-sulfate)

3D Structure for HMDB0240508 (Epicatechin 3'-sulfate)

Predicted Collision Cross Sections

Predicted Kovats Retention Indices

Underivatized

Derivatized

GC-MS Spectra

MS/MS Spectra

NMR Spectra