Hmdb loader
Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2020-02-04 18:10:03 UTC
Update Date2022-03-07 03:18:20 UTC
HMDB IDHMDB0240625
Secondary Accession NumbersNone
Metabolite Identification
Common Name5alpha-Androstan-3beta,17alpha-diol disulfate
Description5alpha-Androstan-3beta,17alpha-diol disulfate belongs to the class of organic compounds known as sulfated steroids. These are sterol lipids containing a sulfate group attached to the steroid skeleton. 5alpha-Androstan-3beta,17alpha-diol disulfate was identified as one of forty plasma metabolites that could be used to predict gut microbiome Shannon diversity (PMID: 31477923 ). Shannon diversity is a metric that summarizes both species abundance and evenness, and it has been suggested as a marker for microbiome health.
Structure
Data?1580840032
Synonyms
ValueSource
(3beta,5alpha,17alpha)-Androstane-3,17-diyl bis(hydrogen sulfate)ChEBI
(3b,5a,17a)-Androstane-3,17-diyl bis(hydrogen sulfate)Generator
(3b,5a,17a)-Androstane-3,17-diyl bis(hydrogen sulfuric acid)Generator
(3b,5a,17a)-Androstane-3,17-diyl bis(hydrogen sulphate)Generator
(3b,5a,17a)-Androstane-3,17-diyl bis(hydrogen sulphuric acid)Generator
(3beta,5alpha,17alpha)-Androstane-3,17-diyl bis(hydrogen sulfuric acid)Generator
(3beta,5alpha,17alpha)-Androstane-3,17-diyl bis(hydrogen sulphate)Generator
(3beta,5alpha,17alpha)-Androstane-3,17-diyl bis(hydrogen sulphuric acid)Generator
(3Β,5α,17α)-androstane-3,17-diyl bis(hydrogen sulfate)Generator
(3Β,5α,17α)-androstane-3,17-diyl bis(hydrogen sulfuric acid)Generator
(3Β,5α,17α)-androstane-3,17-diyl bis(hydrogen sulphate)Generator
(3Β,5α,17α)-androstane-3,17-diyl bis(hydrogen sulphuric acid)Generator
5a-Androstan-3b,17a-diol disulfateGenerator
5a-Androstan-3b,17a-diol disulfuric acidGenerator
5a-Androstan-3b,17a-diol disulphateGenerator
5a-Androstan-3b,17a-diol disulphuric acidGenerator
5alpha-Androstan-3beta,17alpha-diol disulfuric acidGenerator
5alpha-Androstan-3beta,17alpha-diol disulphateGenerator
5alpha-Androstan-3beta,17alpha-diol disulphuric acidGenerator
5Α-androstan-3β,17α-diol disulfateGenerator
5Α-androstan-3β,17α-diol disulfuric acidGenerator
5Α-androstan-3β,17α-diol disulphateGenerator
5Α-androstan-3β,17α-diol disulphuric acidGenerator
5a-Androstane-3b,17a-diol disulfateHMDB
5a-Androstane-3b,17a-diol disulfuric acidHMDB
5a-Androstane-3b,17a-diol disulphateHMDB
5a-Androstane-3b,17a-diol disulphuric acidHMDB
5alpha-Androstane-3beta,17alpha-diol disulfuric acidHMDB
5alpha-Androstane-3beta,17alpha-diol disulphateHMDB
5alpha-Androstane-3beta,17alpha-diol disulphuric acidHMDB
5Α-androstane-3β,17α-diol disulfateHMDB
5Α-androstane-3β,17α-diol disulfuric acidHMDB
5Α-androstane-3β,17α-diol disulphateHMDB
5Α-androstane-3β,17α-diol disulphuric acidHMDB
5alpha-Androstan-3beta,17alpha-diol disulfateHMDB
Chemical FormulaC19H32O8S2
Average Molecular Weight452.58
Monoisotopic Molecular Weight452.153860338
IUPAC Name[(1S,2S,5S,7S,10R,11S,14R,15S)-2,15-dimethyl-5-(sulfooxy)tetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadecan-14-yl]oxidanesulfonic acid
Traditional Name[(1S,2S,5S,7S,10R,11S,14R,15S)-2,15-dimethyl-5-(sulfooxy)tetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadecan-14-yl]oxidanesulfonic acid
CAS Registry Number89453-66-7
SMILES
[H][C@@]12CC[C@@H](OS(O)(=O)=O)[C@@]1(C)CC[C@@]1([H])[C@@]2([H])CC[C@@]2([H])C[C@H](CC[C@]12C)OS(O)(=O)=O
InChI Identifier
InChI=1S/C19H32O8S2/c1-18-9-7-13(26-28(20,21)22)11-12(18)3-4-14-15-5-6-17(27-29(23,24)25)19(15,2)10-8-16(14)18/h12-17H,3-11H2,1-2H3,(H,20,21,22)(H,23,24,25)/t12-,13-,14-,15-,16-,17+,18-,19-/m0/s1
InChI KeyJHFAETDERBWUOO-MFXFBURESA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as sulfated steroids. These are sterol lipids containing a sulfate group attached to the steroid skeleton.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassSteroids and steroid derivatives
Sub ClassSulfated steroids
Direct ParentSulfated steroids
Alternative Parents
Substituents
  • Sulfated steroid skeleton
  • Androstane-skeleton
  • Sulfuric acid ester
  • Alkyl sulfate
  • Sulfate-ester
  • Sulfuric acid monoester
  • Organic sulfuric acid or derivatives
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Aliphatic homopolycyclic compound
Molecular FrameworkAliphatic homopolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP-0.87ALOGPS
logP3.31ChemAxon
logS-4.4ALOGPS
pKa (Strongest Acidic)-1.6ChemAxon
Physiological Charge-2ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area127.2 ŲChemAxon
Rotatable Bond Count4ChemAxon
Refractivity104.61 m³·mol⁻¹ChemAxon
Polarizability47.06 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M-2H]-243.46630932474
DeepCCS[M+Na]+217.65330932474

Predicted Retention Times

Underivatized

Chromatographic MethodRetention TimeReference
Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022.6.11 minutes32390414
Predicted by Siyang on May 30, 202218.2768 minutes33406817
Predicted by Siyang using ReTip algorithm on June 8, 20223.0 minutes32390414
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid2998.0 seconds40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid392.3 seconds40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid217.5 seconds40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid192.8 seconds40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid649.1 seconds40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid778.0 seconds40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid862.5 seconds40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)99.0 seconds40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid1373.6 seconds40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid542.3 seconds40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid1922.2 seconds40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid395.6 seconds40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid497.6 seconds40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate316.6 seconds40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA319.5 seconds40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water106.7 seconds40023050

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
5alpha-Androstan-3beta,17alpha-diol disulfate[H][C@@]12CC[C@@H](OS(O)(=O)=O)[C@@]1(C)CC[C@@]1([H])[C@@]2([H])CC[C@@]2([H])C[C@H](CC[C@]12C)OS(O)(=O)=O4251.5Standard polar33892256
5alpha-Androstan-3beta,17alpha-diol disulfate[H][C@@]12CC[C@@H](OS(O)(=O)=O)[C@@]1(C)CC[C@@]1([H])[C@@]2([H])CC[C@@]2([H])C[C@H](CC[C@]12C)OS(O)(=O)=O3337.4Standard non polar33892256
5alpha-Androstan-3beta,17alpha-diol disulfate[H][C@@]12CC[C@@H](OS(O)(=O)=O)[C@@]1(C)CC[C@@]1([H])[C@@]2([H])CC[C@@]2([H])C[C@H](CC[C@]12C)OS(O)(=O)=O3677.0Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
5alpha-Androstan-3beta,17alpha-diol disulfate,1TMS,isomer #1C[C@]12CC[C@H](OS(=O)(=O)O)C[C@@H]1CC[C@@H]1[C@@H]2CC[C@@]2(C)[C@H]1CC[C@H]2OS(=O)(=O)O[Si](C)(C)C3524.2Semi standard non polar33892256
5alpha-Androstan-3beta,17alpha-diol disulfate,1TMS,isomer #1C[C@]12CC[C@H](OS(=O)(=O)O)C[C@@H]1CC[C@@H]1[C@@H]2CC[C@@]2(C)[C@H]1CC[C@H]2OS(=O)(=O)O[Si](C)(C)C3516.4Standard non polar33892256
5alpha-Androstan-3beta,17alpha-diol disulfate,1TMS,isomer #1C[C@]12CC[C@H](OS(=O)(=O)O)C[C@@H]1CC[C@@H]1[C@@H]2CC[C@@]2(C)[C@H]1CC[C@H]2OS(=O)(=O)O[Si](C)(C)C4779.3Standard polar33892256
5alpha-Androstan-3beta,17alpha-diol disulfate,1TMS,isomer #2C[C@]12CC[C@H](OS(=O)(=O)O[Si](C)(C)C)C[C@@H]1CC[C@@H]1[C@@H]2CC[C@@]2(C)[C@H]1CC[C@H]2OS(=O)(=O)O3533.5Semi standard non polar33892256
5alpha-Androstan-3beta,17alpha-diol disulfate,1TMS,isomer #2C[C@]12CC[C@H](OS(=O)(=O)O[Si](C)(C)C)C[C@@H]1CC[C@@H]1[C@@H]2CC[C@@]2(C)[C@H]1CC[C@H]2OS(=O)(=O)O3522.6Standard non polar33892256
5alpha-Androstan-3beta,17alpha-diol disulfate,1TMS,isomer #2C[C@]12CC[C@H](OS(=O)(=O)O[Si](C)(C)C)C[C@@H]1CC[C@@H]1[C@@H]2CC[C@@]2(C)[C@H]1CC[C@H]2OS(=O)(=O)O4728.9Standard polar33892256
5alpha-Androstan-3beta,17alpha-diol disulfate,2TMS,isomer #1C[C@]12CC[C@H](OS(=O)(=O)O[Si](C)(C)C)C[C@@H]1CC[C@@H]1[C@@H]2CC[C@@]2(C)[C@H]1CC[C@H]2OS(=O)(=O)O[Si](C)(C)C3539.8Semi standard non polar33892256
5alpha-Androstan-3beta,17alpha-diol disulfate,2TMS,isomer #1C[C@]12CC[C@H](OS(=O)(=O)O[Si](C)(C)C)C[C@@H]1CC[C@@H]1[C@@H]2CC[C@@]2(C)[C@H]1CC[C@H]2OS(=O)(=O)O[Si](C)(C)C3723.7Standard non polar33892256
5alpha-Androstan-3beta,17alpha-diol disulfate,2TMS,isomer #1C[C@]12CC[C@H](OS(=O)(=O)O[Si](C)(C)C)C[C@@H]1CC[C@@H]1[C@@H]2CC[C@@]2(C)[C@H]1CC[C@H]2OS(=O)(=O)O[Si](C)(C)C4624.6Standard polar33892256
5alpha-Androstan-3beta,17alpha-diol disulfate,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)OS(=O)(=O)O[C@@H]1CC[C@H]2[C@@H]3CC[C@H]4C[C@@H](OS(=O)(=O)O)CC[C@]4(C)[C@H]3CC[C@@]21C3743.5Semi standard non polar33892256
5alpha-Androstan-3beta,17alpha-diol disulfate,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)OS(=O)(=O)O[C@@H]1CC[C@H]2[C@@H]3CC[C@H]4C[C@@H](OS(=O)(=O)O)CC[C@]4(C)[C@H]3CC[C@@]21C3834.9Standard non polar33892256
5alpha-Androstan-3beta,17alpha-diol disulfate,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)OS(=O)(=O)O[C@@H]1CC[C@H]2[C@@H]3CC[C@H]4C[C@@H](OS(=O)(=O)O)CC[C@]4(C)[C@H]3CC[C@@]21C4889.7Standard polar33892256
5alpha-Androstan-3beta,17alpha-diol disulfate,1TBDMS,isomer #2CC(C)(C)[Si](C)(C)OS(=O)(=O)O[C@H]1CC[C@@]2(C)[C@@H](CC[C@@H]3[C@@H]2CC[C@@]2(C)[C@H]3CC[C@H]2OS(=O)(=O)O)C13765.0Semi standard non polar33892256
5alpha-Androstan-3beta,17alpha-diol disulfate,1TBDMS,isomer #2CC(C)(C)[Si](C)(C)OS(=O)(=O)O[C@H]1CC[C@@]2(C)[C@@H](CC[C@@H]3[C@@H]2CC[C@@]2(C)[C@H]3CC[C@H]2OS(=O)(=O)O)C13853.7Standard non polar33892256
5alpha-Androstan-3beta,17alpha-diol disulfate,1TBDMS,isomer #2CC(C)(C)[Si](C)(C)OS(=O)(=O)O[C@H]1CC[C@@]2(C)[C@@H](CC[C@@H]3[C@@H]2CC[C@@]2(C)[C@H]3CC[C@H]2OS(=O)(=O)O)C14834.1Standard polar33892256
5alpha-Androstan-3beta,17alpha-diol disulfate,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)OS(=O)(=O)O[C@H]1CC[C@@]2(C)[C@@H](CC[C@@H]3[C@@H]2CC[C@@]2(C)[C@H]3CC[C@H]2OS(=O)(=O)O[Si](C)(C)C(C)(C)C)C13977.5Semi standard non polar33892256
5alpha-Androstan-3beta,17alpha-diol disulfate,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)OS(=O)(=O)O[C@H]1CC[C@@]2(C)[C@@H](CC[C@@H]3[C@@H]2CC[C@@]2(C)[C@H]3CC[C@H]2OS(=O)(=O)O[Si](C)(C)C(C)(C)C)C14340.8Standard non polar33892256
5alpha-Androstan-3beta,17alpha-diol disulfate,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)OS(=O)(=O)O[C@H]1CC[C@@]2(C)[C@@H](CC[C@@H]3[C@@H]2CC[C@@]2(C)[C@H]3CC[C@H]2OS(=O)(=O)O[Si](C)(C)C(C)(C)C)C14727.5Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - 5alpha-Androstan-3beta,17alpha-diol disulfate GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 5alpha-Androstan-3beta,17alpha-diol disulfate 10V, Negative-QTOFsplash10-0udi-0000900000-9950b041d95e0821557b2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 5alpha-Androstan-3beta,17alpha-diol disulfate 20V, Negative-QTOFsplash10-0udj-7000900000-aa0196952253c079a4d52021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 5alpha-Androstan-3beta,17alpha-diol disulfate 40V, Negative-QTOFsplash10-0002-9000200000-8152a3a701767558f4a32021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 5alpha-Androstan-3beta,17alpha-diol disulfate 10V, Positive-QTOFsplash10-0udi-0002900000-7d5948e032d77b00a41a2021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 5alpha-Androstan-3beta,17alpha-diol disulfate 20V, Positive-QTOFsplash10-0ab9-0092000000-a47f27f0f65376635a642021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 5alpha-Androstan-3beta,17alpha-diol disulfate 40V, Positive-QTOFsplash10-0a4i-2982000000-fbf2afdc8496b4e2df872021-09-25Wishart LabView Spectrum

NMR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted 1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedAdult (>18 years old)BothNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID58163610
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound90186425
PDB IDNot Available
ChEBI ID133112
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Wilmanski T, Rappaport N, Earls JC, Magis AT, Manor O, Lovejoy J, Omenn GS, Hood L, Gibbons SM, Price ND: Blood metabolome predicts gut microbiome alpha-diversity in humans. Nat Biotechnol. 2019 Oct;37(10):1217-1228. doi: 10.1038/s41587-019-0233-9. Epub 2019 Sep 2. [PubMed:31477923 ]