| Record Information |
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| Version | 5.0 |
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| Status | Detected but not Quantified |
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| Creation Date | 2021-09-11 00:19:52 UTC |
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| Update Date | 2021-09-26 22:56:57 UTC |
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| HMDB ID | HMDB0247325 |
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| Secondary Accession Numbers | None |
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| Metabolite Identification |
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| Common Name | 2-Amino-5-iodo-6-phenyl-4-pyrimidinone |
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| Description | 2-Amino-5-iodo-6-phenyl-4-pyrimidinone belongs to the class of organic compounds known as phenylpyrimidines. These are polycyclic aromatic compounds containing a benzene ring linked to a pyrimidine ring through a CC or CN bond. Pyrimidine is a 6-membered ring consisting of four carbon atoms and two nitrogen centers at the 1- and 3- ring positions. Based on a literature review a small amount of articles have been published on 2-Amino-5-iodo-6-phenyl-4-pyrimidinone. This compound has been identified in human blood as reported by (PMID: 31557052 ). 2-amino-5-iodo-6-phenyl-4-pyrimidinone is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically 2-Amino-5-iodo-6-phenyl-4-pyrimidinone is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources. |
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| Structure | NC1=NC(=C(I)C(=O)N1)C1=CC=CC=C1 InChI=1S/C10H8IN3O/c11-7-8(6-4-2-1-3-5-6)13-10(12)14-9(7)15/h1-5H,(H3,12,13,14,15) |
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| Synonyms | Not Available |
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| Chemical Formula | C10H8IN3O |
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| Average Molecular Weight | 313.098 |
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| Monoisotopic Molecular Weight | 312.97121 |
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| IUPAC Name | 2-amino-5-iodo-6-phenyl-3,4-dihydropyrimidin-4-one |
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| Traditional Name | 2-amino-5-iodo-6-phenyl-3H-pyrimidin-4-one |
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| CAS Registry Number | Not Available |
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| SMILES | NC1=NC(=C(I)C(=O)N1)C1=CC=CC=C1 |
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| InChI Identifier | InChI=1S/C10H8IN3O/c11-7-8(6-4-2-1-3-5-6)13-10(12)14-9(7)15/h1-5H,(H3,12,13,14,15) |
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| InChI Key | JBQRDRKWCBEQKP-UHFFFAOYSA-N |
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| Chemical Taxonomy |
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| Description | Belongs to the class of organic compounds known as phenylpyrimidines. These are polycyclic aromatic compounds containing a benzene ring linked to a pyrimidine ring through a CC or CN bond. Pyrimidine is a 6-membered ring consisting of four carbon atoms and two nitrogen centers at the 1- and 3- ring positions. |
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| Kingdom | Organic compounds |
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| Super Class | Organoheterocyclic compounds |
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| Class | Diazines |
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| Sub Class | Pyrimidines and pyrimidine derivatives |
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| Direct Parent | Phenylpyrimidines |
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| Alternative Parents | |
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| Substituents | - 4-phenylpyrimidine
- 5-phenylpyrimidine
- Aminopyrimidine
- Halopyrimidine
- Pyrimidone
- Benzenoid
- Aryl halide
- Aryl iodide
- Monocyclic benzene moiety
- Hydropyrimidine
- Heteroaromatic compound
- Vinylogous amide
- Azacycle
- Organopnictogen compound
- Organooxygen compound
- Organonitrogen compound
- Organoiodide
- Organohalogen compound
- Organic nitrogen compound
- Amine
- Organic oxygen compound
- Primary amine
- Hydrocarbon derivative
- Organic oxide
- Aromatic heteromonocyclic compound
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| Molecular Framework | Aromatic heteromonocyclic compounds |
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| External Descriptors | Not Available |
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| Ontology |
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| Physiological effect | Not Available |
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| Disposition | |
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| Process | Not Available |
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| Role | Not Available |
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| Physical Properties |
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| State | Not Available |
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| Experimental Molecular Properties | | Property | Value | Reference |
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| Melting Point | Not Available | Not Available | | Boiling Point | Not Available | Not Available | | Water Solubility | Not Available | Not Available | | LogP | Not Available | Not Available |
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| Experimental Chromatographic Properties | Not Available |
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| Predicted Molecular Properties | |
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| Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Retention Times Underivatized| Chromatographic Method | Retention Time | Reference |
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| Predicted by Siyang on May 30, 2022 | 10.2364 minutes | 33406817 | | Predicted by Siyang using ReTip algorithm on June 8, 2022 | 1.28 minutes | 32390414 | | Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid | 970.2 seconds | 40023050 | | Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid | 308.8 seconds | 40023050 | | Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid | 106.4 seconds | 40023050 | | Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid | 185.4 seconds | 40023050 | | RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 87.5 seconds | 40023050 | | Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid | 305.6 seconds | 40023050 | | BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid | 409.7 seconds | 40023050 | | HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate) | 209.0 seconds | 40023050 | | UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid | 727.5 seconds | 40023050 | | BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid | 297.2 seconds | 40023050 | | UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid | 897.5 seconds | 40023050 | | SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 202.2 seconds | 40023050 | | RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 259.2 seconds | 40023050 | | MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate | 465.0 seconds | 40023050 | | KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA | 296.8 seconds | 40023050 | | Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water | 124.5 seconds | 40023050 |
Predicted Kovats Retention IndicesUnderivatizedDerivatized| Derivative Name / Structure | SMILES | Kovats RI Value | Column Type | Reference |
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| 2-Amino-5-iodo-6-phenyl-4-pyrimidinone,1TMS,isomer #1 | C[Si](C)(C)NC1=NC(C2=CC=CC=C2)=C(I)C(=O)[NH]1 | 2274.8 | Semi standard non polar | 33892256 | | 2-Amino-5-iodo-6-phenyl-4-pyrimidinone,1TMS,isomer #1 | C[Si](C)(C)NC1=NC(C2=CC=CC=C2)=C(I)C(=O)[NH]1 | 2315.2 | Standard non polar | 33892256 | | 2-Amino-5-iodo-6-phenyl-4-pyrimidinone,1TMS,isomer #1 | C[Si](C)(C)NC1=NC(C2=CC=CC=C2)=C(I)C(=O)[NH]1 | 2839.7 | Standard polar | 33892256 | | 2-Amino-5-iodo-6-phenyl-4-pyrimidinone,1TMS,isomer #2 | C[Si](C)(C)N1C(N)=NC(C2=CC=CC=C2)=C(I)C1=O | 2264.8 | Semi standard non polar | 33892256 | | 2-Amino-5-iodo-6-phenyl-4-pyrimidinone,1TMS,isomer #2 | C[Si](C)(C)N1C(N)=NC(C2=CC=CC=C2)=C(I)C1=O | 2302.4 | Standard non polar | 33892256 | | 2-Amino-5-iodo-6-phenyl-4-pyrimidinone,1TMS,isomer #2 | C[Si](C)(C)N1C(N)=NC(C2=CC=CC=C2)=C(I)C1=O | 3005.7 | Standard polar | 33892256 | | 2-Amino-5-iodo-6-phenyl-4-pyrimidinone,2TMS,isomer #1 | C[Si](C)(C)N(C1=NC(C2=CC=CC=C2)=C(I)C(=O)[NH]1)[Si](C)(C)C | 2190.7 | Semi standard non polar | 33892256 | | 2-Amino-5-iodo-6-phenyl-4-pyrimidinone,2TMS,isomer #1 | C[Si](C)(C)N(C1=NC(C2=CC=CC=C2)=C(I)C(=O)[NH]1)[Si](C)(C)C | 2408.0 | Standard non polar | 33892256 | | 2-Amino-5-iodo-6-phenyl-4-pyrimidinone,2TMS,isomer #1 | C[Si](C)(C)N(C1=NC(C2=CC=CC=C2)=C(I)C(=O)[NH]1)[Si](C)(C)C | 2673.0 | Standard polar | 33892256 | | 2-Amino-5-iodo-6-phenyl-4-pyrimidinone,2TMS,isomer #2 | C[Si](C)(C)NC1=NC(C2=CC=CC=C2)=C(I)C(=O)N1[Si](C)(C)C | 2263.3 | Semi standard non polar | 33892256 | | 2-Amino-5-iodo-6-phenyl-4-pyrimidinone,2TMS,isomer #2 | C[Si](C)(C)NC1=NC(C2=CC=CC=C2)=C(I)C(=O)N1[Si](C)(C)C | 2304.3 | Standard non polar | 33892256 | | 2-Amino-5-iodo-6-phenyl-4-pyrimidinone,2TMS,isomer #2 | C[Si](C)(C)NC1=NC(C2=CC=CC=C2)=C(I)C(=O)N1[Si](C)(C)C | 2639.6 | Standard polar | 33892256 | | 2-Amino-5-iodo-6-phenyl-4-pyrimidinone,3TMS,isomer #1 | C[Si](C)(C)N(C1=NC(C2=CC=CC=C2)=C(I)C(=O)N1[Si](C)(C)C)[Si](C)(C)C | 2304.0 | Semi standard non polar | 33892256 | | 2-Amino-5-iodo-6-phenyl-4-pyrimidinone,3TMS,isomer #1 | C[Si](C)(C)N(C1=NC(C2=CC=CC=C2)=C(I)C(=O)N1[Si](C)(C)C)[Si](C)(C)C | 2420.8 | Standard non polar | 33892256 | | 2-Amino-5-iodo-6-phenyl-4-pyrimidinone,3TMS,isomer #1 | C[Si](C)(C)N(C1=NC(C2=CC=CC=C2)=C(I)C(=O)N1[Si](C)(C)C)[Si](C)(C)C | 2478.0 | Standard polar | 33892256 | | 2-Amino-5-iodo-6-phenyl-4-pyrimidinone,1TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)NC1=NC(C2=CC=CC=C2)=C(I)C(=O)[NH]1 | 2465.1 | Semi standard non polar | 33892256 | | 2-Amino-5-iodo-6-phenyl-4-pyrimidinone,1TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)NC1=NC(C2=CC=CC=C2)=C(I)C(=O)[NH]1 | 2560.2 | Standard non polar | 33892256 | | 2-Amino-5-iodo-6-phenyl-4-pyrimidinone,1TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)NC1=NC(C2=CC=CC=C2)=C(I)C(=O)[NH]1 | 2909.5 | Standard polar | 33892256 | | 2-Amino-5-iodo-6-phenyl-4-pyrimidinone,1TBDMS,isomer #2 | CC(C)(C)[Si](C)(C)N1C(N)=NC(C2=CC=CC=C2)=C(I)C1=O | 2511.1 | Semi standard non polar | 33892256 | | 2-Amino-5-iodo-6-phenyl-4-pyrimidinone,1TBDMS,isomer #2 | CC(C)(C)[Si](C)(C)N1C(N)=NC(C2=CC=CC=C2)=C(I)C1=O | 2503.9 | Standard non polar | 33892256 | | 2-Amino-5-iodo-6-phenyl-4-pyrimidinone,1TBDMS,isomer #2 | CC(C)(C)[Si](C)(C)N1C(N)=NC(C2=CC=CC=C2)=C(I)C1=O | 3016.6 | Standard polar | 33892256 | | 2-Amino-5-iodo-6-phenyl-4-pyrimidinone,2TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)N(C1=NC(C2=CC=CC=C2)=C(I)C(=O)[NH]1)[Si](C)(C)C(C)(C)C | 2620.9 | Semi standard non polar | 33892256 | | 2-Amino-5-iodo-6-phenyl-4-pyrimidinone,2TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)N(C1=NC(C2=CC=CC=C2)=C(I)C(=O)[NH]1)[Si](C)(C)C(C)(C)C | 2780.2 | Standard non polar | 33892256 | | 2-Amino-5-iodo-6-phenyl-4-pyrimidinone,2TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)N(C1=NC(C2=CC=CC=C2)=C(I)C(=O)[NH]1)[Si](C)(C)C(C)(C)C | 2799.4 | Standard polar | 33892256 | | 2-Amino-5-iodo-6-phenyl-4-pyrimidinone,2TBDMS,isomer #2 | CC(C)(C)[Si](C)(C)NC1=NC(C2=CC=CC=C2)=C(I)C(=O)N1[Si](C)(C)C(C)(C)C | 2685.8 | Semi standard non polar | 33892256 | | 2-Amino-5-iodo-6-phenyl-4-pyrimidinone,2TBDMS,isomer #2 | CC(C)(C)[Si](C)(C)NC1=NC(C2=CC=CC=C2)=C(I)C(=O)N1[Si](C)(C)C(C)(C)C | 2722.4 | Standard non polar | 33892256 | | 2-Amino-5-iodo-6-phenyl-4-pyrimidinone,2TBDMS,isomer #2 | CC(C)(C)[Si](C)(C)NC1=NC(C2=CC=CC=C2)=C(I)C(=O)N1[Si](C)(C)C(C)(C)C | 2793.3 | Standard polar | 33892256 | | 2-Amino-5-iodo-6-phenyl-4-pyrimidinone,3TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)N(C1=NC(C2=CC=CC=C2)=C(I)C(=O)N1[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C | 2890.6 | Semi standard non polar | 33892256 | | 2-Amino-5-iodo-6-phenyl-4-pyrimidinone,3TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)N(C1=NC(C2=CC=CC=C2)=C(I)C(=O)N1[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C | 2988.4 | Standard non polar | 33892256 | | 2-Amino-5-iodo-6-phenyl-4-pyrimidinone,3TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)N(C1=NC(C2=CC=CC=C2)=C(I)C(=O)N1[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C | 2772.8 | Standard polar | 33892256 |
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