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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 02:14:10 UTC
Update Date2021-09-26 22:59:16 UTC
HMDB IDHMDB0248788
Secondary Accession NumbersNone
Metabolite Identification
Common Name{4-[4-(6-Carbamoyl-3,5-dimethylpyrazin-2-yl)phenyl]cyclohexyl}acetic acid
Description{4-[4-(6-Carbamoyl-3,5-dimethylpyrazin-2-yl)phenyl]cyclohexyl}acetic acid belongs to the class of organic compounds known as pyrazinecarboxamides. Pyrazinecarboxamides are compounds containing a pyrazine ring which bears a carboxamide. Based on a literature review very few articles have been published on {4-[4-(6-Carbamoyl-3,5-dimethylpyrazin-2-yl)phenyl]cyclohexyl}acetic acid. This compound has been identified in human blood as reported by (PMID: 31557052 ). {4-[4-(6-carbamoyl-3,5-dimethylpyrazin-2-yl)phenyl]cyclohexyl}acetic acid is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically {4-[4-(6-Carbamoyl-3,5-dimethylpyrazin-2-yl)phenyl]cyclohexyl}acetic acid is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
Synonyms
ValueSource
{4-[4-(6-carbamoyl-3,5-dimethylpyrazin-2-yl)phenyl]cyclohexyl}acetateGenerator
Chemical FormulaC21H25N3O3
Average Molecular Weight367.449
Monoisotopic Molecular Weight367.189591677
IUPAC Name2-{4-[4-(6-carbamoyl-3,5-dimethylpyrazin-2-yl)phenyl]cyclohexyl}acetic acid
Traditional Name{4-[4-(6-carbamoyl-3,5-dimethylpyrazin-2-yl)phenyl]cyclohexyl}acetic acid
CAS Registry NumberNot Available
SMILES
CC1=NC(C)=C(N=C1C(N)=O)C1=CC=C(C=C1)C1CCC(CC(O)=O)CC1
InChI Identifier
InChI=1S/C21H25N3O3/c1-12-19(24-20(21(22)27)13(2)23-12)17-9-7-16(8-10-17)15-5-3-14(4-6-15)11-18(25)26/h7-10,14-15H,3-6,11H2,1-2H3,(H2,22,27)(H,25,26)
InChI KeyYXFNPRHZMOGREC-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as pyrazinecarboxamides. Pyrazinecarboxamides are compounds containing a pyrazine ring which bears a carboxamide.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassDiazines
Sub ClassPyrazines
Direct ParentPyrazinecarboxamides
Alternative Parents
Substituents
  • Pyrazinecarboxamide
  • 2-heteroaryl carboxamide
  • Monocyclic benzene moiety
  • Benzenoid
  • Heteroaromatic compound
  • Carboxamide group
  • Primary carboxylic acid amide
  • Monocarboxylic acid or derivatives
  • Carboxylic acid
  • Carboxylic acid derivative
  • Azacycle
  • Organic oxide
  • Organic oxygen compound
  • Organic nitrogen compound
  • Organooxygen compound
  • Organonitrogen compound
  • Carbonyl group
  • Hydrocarbon derivative
  • Aromatic heteromonocyclic compound
Molecular FrameworkAromatic heteromonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP3.13ALOGPS
logP2.6ChemAxon
logS-4.7ALOGPS
pKa (Strongest Acidic)4.8ChemAxon
pKa (Strongest Basic)0.87ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count5ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area106.17 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity101.4 m³·mol⁻¹ChemAxon
Polarizability41.37 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+193.68430932474
DeepCCS[M-H]-191.32630932474
DeepCCS[M-2H]-225.13230932474
DeepCCS[M+Na]+200.3630932474
AllCCS[M+H]+191.232859911
AllCCS[M+H-H2O]+188.432859911
AllCCS[M+NH4]+193.932859911
AllCCS[M+Na]+194.632859911
AllCCS[M-H]-193.832859911
AllCCS[M+Na-2H]-194.332859911
AllCCS[M+HCOO]-195.032859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
{4-[4-(6-Carbamoyl-3,5-dimethylpyrazin-2-yl)phenyl]cyclohexyl}acetic acidCC1=NC(C)=C(N=C1C(N)=O)C1=CC=C(C=C1)C1CCC(CC(O)=O)CC13961.3Standard polar33892256
{4-[4-(6-Carbamoyl-3,5-dimethylpyrazin-2-yl)phenyl]cyclohexyl}acetic acidCC1=NC(C)=C(N=C1C(N)=O)C1=CC=C(C=C1)C1CCC(CC(O)=O)CC13015.8Standard non polar33892256
{4-[4-(6-Carbamoyl-3,5-dimethylpyrazin-2-yl)phenyl]cyclohexyl}acetic acidCC1=NC(C)=C(N=C1C(N)=O)C1=CC=C(C=C1)C1CCC(CC(O)=O)CC13357.4Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
{4-[4-(6-Carbamoyl-3,5-dimethylpyrazin-2-yl)phenyl]cyclohexyl}acetic acid,2TMS,isomer #1CC1=NC(C)=C(C2=CC=C(C3CCC(CC(=O)O[Si](C)(C)C)CC3)C=C2)N=C1C(=O)N[Si](C)(C)C3397.8Semi standard non polar33892256
{4-[4-(6-Carbamoyl-3,5-dimethylpyrazin-2-yl)phenyl]cyclohexyl}acetic acid,2TMS,isomer #1CC1=NC(C)=C(C2=CC=C(C3CCC(CC(=O)O[Si](C)(C)C)CC3)C=C2)N=C1C(=O)N[Si](C)(C)C3212.4Standard non polar33892256
{4-[4-(6-Carbamoyl-3,5-dimethylpyrazin-2-yl)phenyl]cyclohexyl}acetic acid,2TMS,isomer #1CC1=NC(C)=C(C2=CC=C(C3CCC(CC(=O)O[Si](C)(C)C)CC3)C=C2)N=C1C(=O)N[Si](C)(C)C4192.5Standard polar33892256
{4-[4-(6-Carbamoyl-3,5-dimethylpyrazin-2-yl)phenyl]cyclohexyl}acetic acid,2TMS,isomer #2CC1=NC(C)=C(C2=CC=C(C3CCC(CC(=O)O)CC3)C=C2)N=C1C(=O)N([Si](C)(C)C)[Si](C)(C)C3563.7Semi standard non polar33892256
{4-[4-(6-Carbamoyl-3,5-dimethylpyrazin-2-yl)phenyl]cyclohexyl}acetic acid,2TMS,isomer #2CC1=NC(C)=C(C2=CC=C(C3CCC(CC(=O)O)CC3)C=C2)N=C1C(=O)N([Si](C)(C)C)[Si](C)(C)C3399.9Standard non polar33892256
{4-[4-(6-Carbamoyl-3,5-dimethylpyrazin-2-yl)phenyl]cyclohexyl}acetic acid,2TMS,isomer #2CC1=NC(C)=C(C2=CC=C(C3CCC(CC(=O)O)CC3)C=C2)N=C1C(=O)N([Si](C)(C)C)[Si](C)(C)C4256.1Standard polar33892256
{4-[4-(6-Carbamoyl-3,5-dimethylpyrazin-2-yl)phenyl]cyclohexyl}acetic acid,3TMS,isomer #1CC1=NC(C)=C(C2=CC=C(C3CCC(CC(=O)O[Si](C)(C)C)CC3)C=C2)N=C1C(=O)N([Si](C)(C)C)[Si](C)(C)C3476.3Semi standard non polar33892256
{4-[4-(6-Carbamoyl-3,5-dimethylpyrazin-2-yl)phenyl]cyclohexyl}acetic acid,3TMS,isomer #1CC1=NC(C)=C(C2=CC=C(C3CCC(CC(=O)O[Si](C)(C)C)CC3)C=C2)N=C1C(=O)N([Si](C)(C)C)[Si](C)(C)C3403.8Standard non polar33892256
{4-[4-(6-Carbamoyl-3,5-dimethylpyrazin-2-yl)phenyl]cyclohexyl}acetic acid,3TMS,isomer #1CC1=NC(C)=C(C2=CC=C(C3CCC(CC(=O)O[Si](C)(C)C)CC3)C=C2)N=C1C(=O)N([Si](C)(C)C)[Si](C)(C)C3941.3Standard polar33892256
{4-[4-(6-Carbamoyl-3,5-dimethylpyrazin-2-yl)phenyl]cyclohexyl}acetic acid,2TBDMS,isomer #1CC1=NC(C)=C(C2=CC=C(C3CCC(CC(=O)O[Si](C)(C)C(C)(C)C)CC3)C=C2)N=C1C(=O)N[Si](C)(C)C(C)(C)C3811.2Semi standard non polar33892256
{4-[4-(6-Carbamoyl-3,5-dimethylpyrazin-2-yl)phenyl]cyclohexyl}acetic acid,2TBDMS,isomer #1CC1=NC(C)=C(C2=CC=C(C3CCC(CC(=O)O[Si](C)(C)C(C)(C)C)CC3)C=C2)N=C1C(=O)N[Si](C)(C)C(C)(C)C3645.1Standard non polar33892256
{4-[4-(6-Carbamoyl-3,5-dimethylpyrazin-2-yl)phenyl]cyclohexyl}acetic acid,2TBDMS,isomer #1CC1=NC(C)=C(C2=CC=C(C3CCC(CC(=O)O[Si](C)(C)C(C)(C)C)CC3)C=C2)N=C1C(=O)N[Si](C)(C)C(C)(C)C4295.3Standard polar33892256
{4-[4-(6-Carbamoyl-3,5-dimethylpyrazin-2-yl)phenyl]cyclohexyl}acetic acid,2TBDMS,isomer #2CC1=NC(C)=C(C2=CC=C(C3CCC(CC(=O)O)CC3)C=C2)N=C1C(=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C3996.0Semi standard non polar33892256
{4-[4-(6-Carbamoyl-3,5-dimethylpyrazin-2-yl)phenyl]cyclohexyl}acetic acid,2TBDMS,isomer #2CC1=NC(C)=C(C2=CC=C(C3CCC(CC(=O)O)CC3)C=C2)N=C1C(=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C3773.0Standard non polar33892256
{4-[4-(6-Carbamoyl-3,5-dimethylpyrazin-2-yl)phenyl]cyclohexyl}acetic acid,2TBDMS,isomer #2CC1=NC(C)=C(C2=CC=C(C3CCC(CC(=O)O)CC3)C=C2)N=C1C(=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C4300.4Standard polar33892256
{4-[4-(6-Carbamoyl-3,5-dimethylpyrazin-2-yl)phenyl]cyclohexyl}acetic acid,3TBDMS,isomer #1CC1=NC(C)=C(C2=CC=C(C3CCC(CC(=O)O[Si](C)(C)C(C)(C)C)CC3)C=C2)N=C1C(=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C4029.1Semi standard non polar33892256
{4-[4-(6-Carbamoyl-3,5-dimethylpyrazin-2-yl)phenyl]cyclohexyl}acetic acid,3TBDMS,isomer #1CC1=NC(C)=C(C2=CC=C(C3CCC(CC(=O)O[Si](C)(C)C(C)(C)C)CC3)C=C2)N=C1C(=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C3958.3Standard non polar33892256
{4-[4-(6-Carbamoyl-3,5-dimethylpyrazin-2-yl)phenyl]cyclohexyl}acetic acid,3TBDMS,isomer #1CC1=NC(C)=C(C2=CC=C(C3CCC(CC(=O)O[Si](C)(C)C(C)(C)C)CC3)C=C2)N=C1C(=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C4087.7Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - {4-[4-(6-Carbamoyl-3,5-dimethylpyrazin-2-yl)phenyl]cyclohexyl}acetic acid GC-MS (Non-derivatized) - 70eV, Positivesplash10-066s-1197000000-7172125dc11bdf65b20e2021-09-24Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - {4-[4-(6-Carbamoyl-3,5-dimethylpyrazin-2-yl)phenyl]cyclohexyl}acetic acid GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - {4-[4-(6-Carbamoyl-3,5-dimethylpyrazin-2-yl)phenyl]cyclohexyl}acetic acid GC-MS (TMS_1_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - {4-[4-(6-Carbamoyl-3,5-dimethylpyrazin-2-yl)phenyl]cyclohexyl}acetic acid GC-MS (TMS_1_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - {4-[4-(6-Carbamoyl-3,5-dimethylpyrazin-2-yl)phenyl]cyclohexyl}acetic acid GC-MS (TBDMS_1_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - {4-[4-(6-Carbamoyl-3,5-dimethylpyrazin-2-yl)phenyl]cyclohexyl}acetic acid GC-MS (TBDMS_1_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - {4-[4-(6-Carbamoyl-3,5-dimethylpyrazin-2-yl)phenyl]cyclohexyl}acetic acid 10V, Positive-QTOFsplash10-0gb9-0009000000-3feddcd76d79b3765cb42021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - {4-[4-(6-Carbamoyl-3,5-dimethylpyrazin-2-yl)phenyl]cyclohexyl}acetic acid 20V, Positive-QTOFsplash10-0udi-0049000000-d281229b72c47b74925d2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - {4-[4-(6-Carbamoyl-3,5-dimethylpyrazin-2-yl)phenyl]cyclohexyl}acetic acid 40V, Positive-QTOFsplash10-0pxr-0094000000-1392fae5889379dd174d2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - {4-[4-(6-Carbamoyl-3,5-dimethylpyrazin-2-yl)phenyl]cyclohexyl}acetic acid 10V, Negative-QTOFsplash10-014i-0009000000-19efc1e763672b76b04e2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - {4-[4-(6-Carbamoyl-3,5-dimethylpyrazin-2-yl)phenyl]cyclohexyl}acetic acid 20V, Negative-QTOFsplash10-0096-6039000000-0465d331e0e7901219ae2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - {4-[4-(6-Carbamoyl-3,5-dimethylpyrazin-2-yl)phenyl]cyclohexyl}acetic acid 40V, Negative-QTOFsplash10-0006-9074000000-fac3feccd5fe60c02a552021-10-12Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID30687717
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound42636350
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]