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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 07:14:41 UTC
Update Date2021-09-26 23:01:37 UTC
HMDB IDHMDB0250261
Secondary Accession NumbersNone
Metabolite Identification
Common NameCinchophen
DescriptionCinchophen, also known as cincain or atofan, belongs to the class of organic compounds known as phenylquinolines. These are heterocyclic compounds containing a quinoline moiety substituted with a phenyl group. Based on a literature review very few articles have been published on Cinchophen. This compound has been identified in human blood as reported by (PMID: 31557052 ). Cinchophen is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Cinchophen is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
Synonyms
ValueSource
CincainKegg
AtofanMeSH
AciphenochinoliumMeSH
2-Phenylquinoline-4-carboxylateGenerator
Chemical FormulaC16H11NO2
Average Molecular Weight249.269
Monoisotopic Molecular Weight249.078978598
IUPAC Name2-phenylquinoline-4-carboxylic acid
Traditional Nametervalon
CAS Registry NumberNot Available
SMILES
OC(=O)C1=CC(=NC2=CC=CC=C12)C1=CC=CC=C1
InChI Identifier
InChI=1S/C16H11NO2/c18-16(19)13-10-15(11-6-2-1-3-7-11)17-14-9-5-4-8-12(13)14/h1-10H,(H,18,19)
InChI KeyYTRMTPPVNRALON-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as phenylquinolines. These are heterocyclic compounds containing a quinoline moiety substituted with a phenyl group.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassQuinolines and derivatives
Sub ClassPhenylquinolines
Direct ParentPhenylquinolines
Alternative Parents
Substituents
  • Phenylquinoline
  • Quinoline-4-carboxylic acid
  • 2-phenylpyridine
  • Pyridine carboxylic acid
  • Pyridine carboxylic acid or derivatives
  • Monocyclic benzene moiety
  • Pyridine
  • Benzenoid
  • Heteroaromatic compound
  • Monocarboxylic acid or derivatives
  • Carboxylic acid
  • Carboxylic acid derivative
  • Azacycle
  • Hydrocarbon derivative
  • Organic oxide
  • Organopnictogen compound
  • Organic oxygen compound
  • Organooxygen compound
  • Organonitrogen compound
  • Organic nitrogen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP3.41ALOGPS
logP3.82ChemAxon
logS-3.8ALOGPS
pKa (Strongest Acidic)3.57ChemAxon
pKa (Strongest Basic)1.26ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count3ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area50.19 ŲChemAxon
Rotatable Bond Count2ChemAxon
Refractivity72 m³·mol⁻¹ChemAxon
Polarizability26.59 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M-2H]-187.93630932474
DeepCCS[M+Na]+163.42330932474
AllCCS[M+H]+157.132859911
AllCCS[M+H-H2O]+153.032859911
AllCCS[M+NH4]+160.932859911
AllCCS[M+Na]+162.032859911
AllCCS[M-H]-158.632859911
AllCCS[M+Na-2H]-157.832859911
AllCCS[M+HCOO]-157.032859911

Predicted Retention Times

Underivatized

Chromatographic MethodRetention TimeReference
Predicted by Siyang on May 30, 202213.2038 minutes33406817
Predicted by Siyang using ReTip algorithm on June 8, 20221.81 minutes32390414
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid2592.1 seconds40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid413.0 seconds40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid173.4 seconds40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid248.1 seconds40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid432.9 seconds40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid612.1 seconds40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid690.0 seconds40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)139.8 seconds40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid1215.9 seconds40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid446.3 seconds40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid1467.3 seconds40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid341.1 seconds40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid387.7 seconds40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate395.8 seconds40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA320.0 seconds40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water96.4 seconds40023050

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
CinchophenOC(=O)C1=CC(=NC2=CC=CC=C12)C1=CC=CC=C13656.3Standard polar33892256
CinchophenOC(=O)C1=CC(=NC2=CC=CC=C12)C1=CC=CC=C12383.7Standard non polar33892256
CinchophenOC(=O)C1=CC(=NC2=CC=CC=C12)C1=CC=CC=C12484.1Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Cinchophen GC-MS (Non-derivatized) - 70eV, Positivesplash10-05gj-0290000000-a568441f1ad4207fe8b42021-09-23Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Cinchophen GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Cinchophen GC-MS (TMS_1_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Cinchophen GC-MS (TBDMS_1_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Experimental LC-MS/MSLC-MS/MS Spectrum - Cinchophen , positive-QTOFsplash10-0udi-3790000000-31e23d03a9ff214f1d8a2017-09-14HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Cinchophen 60V, Negative-QTOFsplash10-0udi-0090000000-dccf882a02e42ff9e6e02021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Cinchophen 45V, Negative-QTOFsplash10-0udi-0090000000-03b0507c86efe6524ee62021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Cinchophen 75V, Negative-QTOFsplash10-0udi-0390000000-81c010c01a5c0f176d162021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Cinchophen 90V, Negative-QTOFsplash10-0udi-0940000000-42745b4de1849e2dfa2a2021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Cinchophen 90V, Positive-QTOFsplash10-004i-2920000000-40add173ab0c89e687182021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Cinchophen 75V, Positive-QTOFsplash10-0fi0-0960000000-575df046d5b869da83ca2021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Cinchophen 30V, Negative-QTOFsplash10-0udi-0090000000-e9a770b61bdc5264c71b2021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Cinchophen 15V, Negative-QTOFsplash10-0udi-0090000000-40cc75291adfca79e1f42021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Cinchophen 60V, Positive-QTOFsplash10-0udi-0290000000-ac6e2bfa4294731aead62021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Cinchophen 45V, Positive-QTOFsplash10-0udi-0090000000-2b864e546840799c04632021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Cinchophen 15V, Positive-QTOFsplash10-0udi-0090000000-c637de6e7fe7a24078da2021-09-20HMDB team, MONAView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cinchophen 10V, Positive-QTOFsplash10-0udi-0090000000-be8a94eeb57b6ccd799f2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cinchophen 20V, Positive-QTOFsplash10-0udi-0090000000-d0d538b2d2c0d37e8ebb2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cinchophen 40V, Positive-QTOFsplash10-0udi-1190000000-ddc5a38b6dd06b6a37932016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cinchophen 10V, Negative-QTOFsplash10-0002-0090000000-06e2ac40423affcdadf92016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cinchophen 20V, Negative-QTOFsplash10-0udj-0090000000-9f82944c35c603bf29022016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cinchophen 40V, Negative-QTOFsplash10-0udi-1390000000-d1ad2ed3b032448037572016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cinchophen 10V, Positive-QTOFsplash10-0f89-0090000000-c80d636e16c22844ba382021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cinchophen 20V, Positive-QTOFsplash10-0f89-0090000000-47c5cc4ec6f9539d36a02021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cinchophen 40V, Positive-QTOFsplash10-0zgi-0090000000-ec665df6533a21fba4762021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cinchophen 10V, Negative-QTOFsplash10-0udj-0090000000-b48d207d5f0063209d0d2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cinchophen 20V, Negative-QTOFsplash10-0udi-0090000000-58931337bc784d7ab3492021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cinchophen 40V, Negative-QTOFsplash10-0udi-0090000000-43df5032f4c8313513192021-10-12Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDDB13551
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID8274
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkCinchophen
METLIN IDNot Available
PubChem Compound8593
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]