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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 07:28:16 UTC
Update Date2021-09-26 23:01:55 UTC
HMDB IDHMDB0250458
Secondary Accession NumbersNone
Metabolite Identification
Common NameCorrole
DescriptionBased on a literature review a significant number of articles have been published on Corrole. This compound has been identified in human blood as reported by (PMID: 31557052 ). Corrole is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Corrole is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC19H14N4
Average Molecular Weight298.349
Monoisotopic Molecular Weight298.121846467
IUPAC Name20,21,22,23-tetraazapentacyclo[15.2.1.1^{2,5}.1^{7,10}.1^{12,15}]tricosa-1(20),2,4,6,8,10,12,14,16,18-decaene
Traditional Name20,21,22,23-tetraazapentacyclo[15.2.1.1^{2,5}.1^{7,10}.1^{12,15}]tricosa-1(20),2,4,6,8,10,12,14,16,18-decaene
CAS Registry NumberNot Available
SMILES
N1C2=CC=C1\C=C1\C=CC(=N1)C1=CC=C(N1)\C=C1/N\C(\C=C1)=C/2
InChI Identifier
InChI=1S/C19H14N4/c1-3-14-10-16-5-7-18(22-16)19-8-6-17(23-19)11-15-4-2-13(21-15)9-12(1)20-14/h1-11,20-22H/b12-9-,13-9-,14-10-,15-11-,16-10+,17-11-,19-18+
InChI KeyLYNARWYQOUZXDY-OPBCRXQCSA-N
Chemical Taxonomy
ClassificationNot classified
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP2.91ALOGPS
logP4.22ChemAxon
logS-4ALOGPS
pKa (Strongest Acidic)14.06ChemAxon
pKa (Strongest Basic)4.61ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count1ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area60.26 ŲChemAxon
Rotatable Bond Count0ChemAxon
Refractivity89.87 m³·mol⁻¹ChemAxon
Polarizability33.36 ųChemAxon
Number of Rings5ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+175.18930932474
DeepCCS[M-H]-172.83130932474
DeepCCS[M-2H]-206.64630932474
DeepCCS[M+Na]+181.87430932474

Predicted Retention Times

Underivatized

Chromatographic MethodRetention TimeReference
Predicted by Siyang on May 30, 202217.5265 minutes33406817
Predicted by Siyang using ReTip algorithm on June 8, 20221.94 minutes32390414
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid2672.1 seconds40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid644.9 seconds40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid227.9 seconds40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid390.2 seconds40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid540.4 seconds40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid661.7 seconds40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid617.1 seconds40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)169.7 seconds40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid1629.8 seconds40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid634.5 seconds40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid1516.0 seconds40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid618.0 seconds40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid395.7 seconds40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate487.4 seconds40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA197.2 seconds40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water8.9 seconds40023050

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
CorroleN1C2=CC=C1\C=C1\C=CC(=N1)C1=CC=C(N1)\C=C1/N\C(\C=C1)=C/24173.6Standard polar33892256
CorroleN1C2=CC=C1\C=C1\C=CC(=N1)C1=CC=C(N1)\C=C1/N\C(\C=C1)=C/23487.1Standard non polar33892256
CorroleN1C2=CC=C1\C=C1\C=CC(=N1)C1=CC=C(N1)\C=C1/N\C(\C=C1)=C/23845.0Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Corrole,1TMS,isomer #1C[Si](C)(C)N1C2=CC=C1C=C1C=CC(=CC3=CC=C([NH]3)C3=NC(=C2)C=C3)[NH]13470.6Semi standard non polar33892256
Corrole,1TMS,isomer #1C[Si](C)(C)N1C2=CC=C1C=C1C=CC(=CC3=CC=C([NH]3)C3=NC(=C2)C=C3)[NH]13093.3Standard non polar33892256
Corrole,1TMS,isomer #1C[Si](C)(C)N1C2=CC=C1C=C1C=CC(=CC3=CC=C([NH]3)C3=NC(=C2)C=C3)[NH]14641.6Standard polar33892256
Corrole,1TMS,isomer #2C[Si](C)(C)N1C2=CC=C1C1=NC(=CC3=CC=C(C=C4C=CC(=C2)[NH]4)[NH]3)C=C13458.6Semi standard non polar33892256
Corrole,1TMS,isomer #2C[Si](C)(C)N1C2=CC=C1C1=NC(=CC3=CC=C(C=C4C=CC(=C2)[NH]4)[NH]3)C=C13082.2Standard non polar33892256
Corrole,1TMS,isomer #2C[Si](C)(C)N1C2=CC=C1C1=NC(=CC3=CC=C(C=C4C=CC(=C2)[NH]4)[NH]3)C=C14479.6Standard polar33892256
Corrole,1TMS,isomer #3C[Si](C)(C)N1C2=CC=C1C=C1C=CC(=C3C=CC(=N3)C=C3C=CC(=C2)[NH]3)[NH]13466.6Semi standard non polar33892256
Corrole,1TMS,isomer #3C[Si](C)(C)N1C2=CC=C1C=C1C=CC(=C3C=CC(=N3)C=C3C=CC(=C2)[NH]3)[NH]13100.6Standard non polar33892256
Corrole,1TMS,isomer #3C[Si](C)(C)N1C2=CC=C1C=C1C=CC(=C3C=CC(=N3)C=C3C=CC(=C2)[NH]3)[NH]14654.4Standard polar33892256
Corrole,2TMS,isomer #1C[Si](C)(C)N1C2=CC=C1C=C1C=CC(=CC3=CC=C(C4=NC(=C2)C=C4)N3[Si](C)(C)C)[NH]13519.3Semi standard non polar33892256
Corrole,2TMS,isomer #1C[Si](C)(C)N1C2=CC=C1C=C1C=CC(=CC3=CC=C(C4=NC(=C2)C=C4)N3[Si](C)(C)C)[NH]13256.3Standard non polar33892256
Corrole,2TMS,isomer #1C[Si](C)(C)N1C2=CC=C1C=C1C=CC(=CC3=CC=C(C4=NC(=C2)C=C4)N3[Si](C)(C)C)[NH]14149.5Standard polar33892256
Corrole,2TMS,isomer #2C[Si](C)(C)N1C2=CC=C1C=C1C=CC(=CC3=CC=C([NH]3)C3=NC(=C2)C=C3)N1[Si](C)(C)C3553.1Semi standard non polar33892256
Corrole,2TMS,isomer #2C[Si](C)(C)N1C2=CC=C1C=C1C=CC(=CC3=CC=C([NH]3)C3=NC(=C2)C=C3)N1[Si](C)(C)C3284.6Standard non polar33892256
Corrole,2TMS,isomer #2C[Si](C)(C)N1C2=CC=C1C=C1C=CC(=CC3=CC=C([NH]3)C3=NC(=C2)C=C3)N1[Si](C)(C)C4388.5Standard polar33892256
Corrole,2TMS,isomer #3C[Si](C)(C)N1C2=CC=C1C=C1C=CC(=C3C=CC(=N3)C=C3C=CC(=C2)[NH]3)N1[Si](C)(C)C3532.1Semi standard non polar33892256
Corrole,2TMS,isomer #3C[Si](C)(C)N1C2=CC=C1C=C1C=CC(=C3C=CC(=N3)C=C3C=CC(=C2)[NH]3)N1[Si](C)(C)C3257.9Standard non polar33892256
Corrole,2TMS,isomer #3C[Si](C)(C)N1C2=CC=C1C=C1C=CC(=C3C=CC(=N3)C=C3C=CC(=C2)[NH]3)N1[Si](C)(C)C4175.6Standard polar33892256
Corrole,3TMS,isomer #1C[Si](C)(C)N1C2=CC=C1C=C1C=CC(=CC3=CC=C(C4=NC(=C2)C=C4)N3[Si](C)(C)C)N1[Si](C)(C)C3650.9Semi standard non polar33892256
Corrole,3TMS,isomer #1C[Si](C)(C)N1C2=CC=C1C=C1C=CC(=CC3=CC=C(C4=NC(=C2)C=C4)N3[Si](C)(C)C)N1[Si](C)(C)C3338.3Standard non polar33892256
Corrole,3TMS,isomer #1C[Si](C)(C)N1C2=CC=C1C=C1C=CC(=CC3=CC=C(C4=NC(=C2)C=C4)N3[Si](C)(C)C)N1[Si](C)(C)C3961.6Standard polar33892256
Corrole,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)N1C2=CC=C1C=C1C=CC(=CC3=CC=C([NH]3)C3=NC(=C2)C=C3)[NH]13719.2Semi standard non polar33892256
Corrole,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)N1C2=CC=C1C=C1C=CC(=CC3=CC=C([NH]3)C3=NC(=C2)C=C3)[NH]13290.7Standard non polar33892256
Corrole,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)N1C2=CC=C1C=C1C=CC(=CC3=CC=C([NH]3)C3=NC(=C2)C=C3)[NH]14696.8Standard polar33892256
Corrole,1TBDMS,isomer #2CC(C)(C)[Si](C)(C)N1C2=CC=C1C1=NC(=CC3=CC=C(C=C4C=CC(=C2)[NH]4)[NH]3)C=C13666.9Semi standard non polar33892256
Corrole,1TBDMS,isomer #2CC(C)(C)[Si](C)(C)N1C2=CC=C1C1=NC(=CC3=CC=C(C=C4C=CC(=C2)[NH]4)[NH]3)C=C13282.4Standard non polar33892256
Corrole,1TBDMS,isomer #2CC(C)(C)[Si](C)(C)N1C2=CC=C1C1=NC(=CC3=CC=C(C=C4C=CC(=C2)[NH]4)[NH]3)C=C14504.0Standard polar33892256
Corrole,1TBDMS,isomer #3CC(C)(C)[Si](C)(C)N1C2=CC=C1C=C1C=CC(=C3C=CC(=N3)C=C3C=CC(=C2)[NH]3)[NH]13706.9Semi standard non polar33892256
Corrole,1TBDMS,isomer #3CC(C)(C)[Si](C)(C)N1C2=CC=C1C=C1C=CC(=C3C=CC(=N3)C=C3C=CC(=C2)[NH]3)[NH]13298.9Standard non polar33892256
Corrole,1TBDMS,isomer #3CC(C)(C)[Si](C)(C)N1C2=CC=C1C=C1C=CC(=C3C=CC(=N3)C=C3C=CC(=C2)[NH]3)[NH]14711.8Standard polar33892256
Corrole,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)N1C2=CC=C1C=C1C=CC(=CC3=CC=C(C4=NC(=C2)C=C4)N3[Si](C)(C)C(C)(C)C)[NH]13923.2Semi standard non polar33892256
Corrole,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)N1C2=CC=C1C=C1C=CC(=CC3=CC=C(C4=NC(=C2)C=C4)N3[Si](C)(C)C(C)(C)C)[NH]13634.8Standard non polar33892256
Corrole,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)N1C2=CC=C1C=C1C=CC(=CC3=CC=C(C4=NC(=C2)C=C4)N3[Si](C)(C)C(C)(C)C)[NH]14209.9Standard polar33892256
Corrole,2TBDMS,isomer #2CC(C)(C)[Si](C)(C)N1C2=CC=C1C=C1C=CC(=CC3=CC=C([NH]3)C3=NC(=C2)C=C3)N1[Si](C)(C)C(C)(C)C3979.5Semi standard non polar33892256
Corrole,2TBDMS,isomer #2CC(C)(C)[Si](C)(C)N1C2=CC=C1C=C1C=CC(=CC3=CC=C([NH]3)C3=NC(=C2)C=C3)N1[Si](C)(C)C(C)(C)C3637.8Standard non polar33892256
Corrole,2TBDMS,isomer #2CC(C)(C)[Si](C)(C)N1C2=CC=C1C=C1C=CC(=CC3=CC=C([NH]3)C3=NC(=C2)C=C3)N1[Si](C)(C)C(C)(C)C4469.5Standard polar33892256
Corrole,2TBDMS,isomer #3CC(C)(C)[Si](C)(C)N1C2=CC=C1C=C1C=CC(=C3C=CC(=N3)C=C3C=CC(=C2)[NH]3)N1[Si](C)(C)C(C)(C)C3933.4Semi standard non polar33892256
Corrole,2TBDMS,isomer #3CC(C)(C)[Si](C)(C)N1C2=CC=C1C=C1C=CC(=C3C=CC(=N3)C=C3C=CC(=C2)[NH]3)N1[Si](C)(C)C(C)(C)C3638.9Standard non polar33892256
Corrole,2TBDMS,isomer #3CC(C)(C)[Si](C)(C)N1C2=CC=C1C=C1C=CC(=C3C=CC(=N3)C=C3C=CC(=C2)[NH]3)N1[Si](C)(C)C(C)(C)C4235.0Standard polar33892256
Corrole,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)N1C2=CC=C1C=C1C=CC(=CC3=CC=C(C4=NC(=C2)C=C4)N3[Si](C)(C)C(C)(C)C)N1[Si](C)(C)C(C)(C)C4162.8Semi standard non polar33892256
Corrole,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)N1C2=CC=C1C=C1C=CC(=CC3=CC=C(C4=NC(=C2)C=C4)N3[Si](C)(C)C(C)(C)C)N1[Si](C)(C)C(C)(C)C3878.5Standard non polar33892256
Corrole,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)N1C2=CC=C1C=C1C=CC(=CC3=CC=C(C4=NC(=C2)C=C4)N3[Si](C)(C)C(C)(C)C)N1[Si](C)(C)C(C)(C)C4098.7Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Corrole GC-MS (Non-derivatized) - 70eV, Positivesplash10-0002-0090000000-fd6450a9bdede81a35fa2021-09-24Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Corrole GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Corrole 10V, Negative-QTOFsplash10-0002-0090000000-9022dcd8cc9c89674bc82021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Corrole 20V, Negative-QTOFsplash10-0002-0090000000-9022dcd8cc9c89674bc82021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Corrole 40V, Negative-QTOFsplash10-006t-0090000000-ca93deeb466ce9702a622021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Corrole 10V, Positive-QTOFsplash10-0002-0090000000-e59d46dadb94a13b52612021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Corrole 20V, Positive-QTOFsplash10-0002-0090000000-e59d46dadb94a13b52612021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Corrole 40V, Positive-QTOFsplash10-006t-0090000000-49015342f825281b4c012021-10-12Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkCorrole
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]