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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 11:57:38 UTC
Update Date2022-11-23 22:13:43 UTC
HMDB IDHMDB0253479
Secondary Accession NumbersNone
Metabolite Identification
Common NameIndoramin
DescriptionIndoramin belongs to the class of organic compounds known as tryptamines and derivatives. Tryptamines and derivatives are compounds containing the tryptamine backbone, which is structurally characterized by an indole ring substituted at the 3-position by an ethanamine. Based on a literature review a significant number of articles have been published on Indoramin. This compound has been identified in human blood as reported by (PMID: 31557052 ). Indoramin is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Indoramin is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
Synonyms
ValueSource
BaratolChEMBL
WY 21901ChEMBL
Chemical FormulaC22H25N3O
Average Molecular Weight347.4534
Monoisotopic Molecular Weight347.199762437
IUPAC NameN-{1-[2-(1H-indol-3-yl)ethyl]piperidin-4-yl}benzenecarboximidic acid
Traditional Nameindoramin
CAS Registry NumberNot Available
SMILES
OC(=NC1CCN(CCC2=CNC3=CC=CC=C23)CC1)C1=CC=CC=C1
InChI Identifier
InChI=1S/C22H25N3O/c26-22(17-6-2-1-3-7-17)24-19-11-14-25(15-12-19)13-10-18-16-23-21-9-5-4-8-20(18)21/h1-9,16,19,23H,10-15H2,(H,24,26)
InChI KeyJXZZEXZZKAWDSP-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as tryptamines and derivatives. Tryptamines and derivatives are compounds containing the tryptamine backbone, which is structurally characterized by an indole ring substituted at the 3-position by an ethanamine.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassIndoles and derivatives
Sub ClassTryptamines and derivatives
Direct ParentTryptamines and derivatives
Alternative Parents
Substituents
  • Tryptamine
  • 3-alkylindole
  • Benzamide
  • Benzoic acid or derivatives
  • Indole
  • Benzoyl
  • Aralkylamine
  • Monocyclic benzene moiety
  • Piperidine
  • Benzenoid
  • Substituted pyrrole
  • Heteroaromatic compound
  • Pyrrole
  • Amino acid or derivatives
  • Carboxamide group
  • Tertiary aliphatic amine
  • Secondary carboxylic acid amide
  • Tertiary amine
  • Carboxylic acid derivative
  • Azacycle
  • Organonitrogen compound
  • Hydrocarbon derivative
  • Amine
  • Organic oxide
  • Organopnictogen compound
  • Organooxygen compound
  • Organic nitrogen compound
  • Organic oxygen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP4.02ALOGPS
logP3.02ChemAxon
logS-4.8ALOGPS
pKa (Strongest Acidic)8.47ChemAxon
pKa (Strongest Basic)9.59ChemAxon
Physiological Charge2ChemAxon
Hydrogen Acceptor Count3ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area51.62 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity106.46 m³·mol⁻¹ChemAxon
Polarizability40.94 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M-2H]-214.42730932474
DeepCCS[M+Na]+190.10630932474
AllCCS[M+H]+187.632859911
AllCCS[M+H-H2O]+184.832859911
AllCCS[M+NH4]+190.232859911
AllCCS[M+Na]+191.032859911
AllCCS[M-H]-188.432859911
AllCCS[M+Na-2H]-188.232859911
AllCCS[M+HCOO]-188.232859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
INDORAMINOC(=NC1CCN(CCC2=CNC3=CC=CC=C23)CC1)C1=CC=CC=C14413.7Standard polar33892256
INDORAMINOC(=NC1CCN(CCC2=CNC3=CC=CC=C23)CC1)C1=CC=CC=C13129.6Standard non polar33892256
INDORAMINOC(=NC1CCN(CCC2=CNC3=CC=CC=C23)CC1)C1=CC=CC=C13429.1Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
INDORAMIN,2TMS,isomer #1C[Si](C)(C)OC(=NC1CCN(CCC2=CN([Si](C)(C)C)C3=CC=CC=C23)CC1)C1=CC=CC=C13154.3Semi standard non polar33892256
INDORAMIN,2TMS,isomer #1C[Si](C)(C)OC(=NC1CCN(CCC2=CN([Si](C)(C)C)C3=CC=CC=C23)CC1)C1=CC=CC=C13136.5Standard non polar33892256
INDORAMIN,2TMS,isomer #1C[Si](C)(C)OC(=NC1CCN(CCC2=CN([Si](C)(C)C)C3=CC=CC=C23)CC1)C1=CC=CC=C13972.8Standard polar33892256
INDORAMIN,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=NC1CCN(CCC2=CN([Si](C)(C)C(C)(C)C)C3=CC=CC=C23)CC1)C1=CC=CC=C13503.1Semi standard non polar33892256
INDORAMIN,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=NC1CCN(CCC2=CN([Si](C)(C)C(C)(C)C)C3=CC=CC=C23)CC1)C1=CC=CC=C13541.0Standard non polar33892256
INDORAMIN,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=NC1CCN(CCC2=CN([Si](C)(C)C(C)(C)C)C3=CC=CC=C23)CC1)C1=CC=CC=C14048.9Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Indoramin GC-MS (Non-derivatized) - 70eV, Positivesplash10-0ar0-5940000000-5d2b04e837a9c61fa9f02021-09-23Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Indoramin GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Indoramin GC-MS (TMS_1_1) - 70eV, PositiveNot Available2021-11-04Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Indoramin GC-MS (TMS_1_2) - 70eV, PositiveNot Available2021-11-04Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Indoramin GC-MS (TBDMS_1_1) - 70eV, PositiveNot Available2021-11-04Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Indoramin GC-MS (TBDMS_1_2) - 70eV, PositiveNot Available2021-11-04Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Indoramin 10V, Positive-QTOFsplash10-0002-0239000000-0d4cf20af178c3a6ae042017-07-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Indoramin 20V, Positive-QTOFsplash10-0a4l-1932000000-a2950acb4bd1c11320f72017-07-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Indoramin 40V, Positive-QTOFsplash10-0006-3900000000-bb4fbd33645229e0fdaf2017-07-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Indoramin 10V, Negative-QTOFsplash10-0002-0119000000-3dfe729b62962deaa05e2017-07-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Indoramin 20V, Negative-QTOFsplash10-0002-3679000000-e825e2e6a81590e29dbc2017-07-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Indoramin 40V, Negative-QTOFsplash10-00bd-9800000000-992779f5d26a566cfa682017-07-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Indoramin 10V, Positive-QTOFsplash10-0002-0009000000-0222757894304db986ec2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Indoramin 20V, Positive-QTOFsplash10-0002-0229000000-5dd79af70540f6aca05a2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Indoramin 40V, Positive-QTOFsplash10-0006-1900000000-e7fd579b5ea1f1bb8d4c2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Indoramin 10V, Negative-QTOFsplash10-0002-0009000000-e3466d70b91ca649c7612021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Indoramin 20V, Negative-QTOFsplash10-0002-0109000000-17e0d9ddbb848a0a10382021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Indoramin 40V, Negative-QTOFsplash10-0006-4911000000-6f1189984a7ce89a28412021-10-12Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDDB08950
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID31014
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkIndoramin
METLIN IDNot Available
PubChem Compound33625
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]