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Record Information

Version

5.0

Status

Detected but not Quantified

Creation Date

2021-09-11 16:12:22 UTC

Update Date

2021-09-26 23:11:18 UTC

HMDB ID

HMDB0255978

Secondary Accession Numbers

None

Metabolite Identification

Common Name

Oxendolone

Description

Oxendolone belongs to the class of organic compounds known as estrogens and derivatives. These are steroids with a structure containing a 3-hydroxylated estrane. Based on a literature review a significant number of articles have been published on Oxendolone. This compound has been identified in human blood as reported by (PMID: 31557052 ). Oxendolone is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Oxendolone is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI

HMDB0255978
     RDKit          3D
Oxendolone
 52 55  0  0  0  0  0  0  0  0999 V2000
    5.3228    0.5179    0.0525 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0094    1.1233   -0.3664 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9670    0.9168    0.6940 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6403    1.5161    0.2955 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9016    0.3859   -0.4397 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5499    0.5746   -0.3205 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8853    1.9926    0.1666 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3052    2.2754   -0.2586 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1583    1.0752   -0.2035 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3875    1.1799   -0.6938 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3147    0.0438   -0.6863 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5522    0.1857   -0.6685 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7463   -1.3140   -0.7007 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2413   -1.3147   -0.5768 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7501   -0.2268    0.3530 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2817   -0.3647    0.5770 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8344   -1.7786    0.3552 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6278   -1.8554    0.6987 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4887   -0.8844    0.0041 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1815   -1.6111   -1.1600 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6199   -0.5039    0.9557 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0977   -0.5869    2.2459 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.2657   -0.5879    0.1217 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0737    0.8341   -0.7240 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6919    0.9807    0.9998 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7300    0.7887   -1.3618 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1741    2.2329   -0.4356 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3396    1.3808    1.6290 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1287    1.8304    1.2004 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7732    2.3997   -0.3608 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1861    0.5566   -1.5228 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0545    0.5072   -1.3306 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8992    2.0108    1.2957 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2333    2.7472   -0.2681 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3118    2.7675   -1.2556 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7346    3.0292    0.4534 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7444    2.1304   -1.1219 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2476   -1.9061    0.0864 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0098   -1.7765   -1.6833 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8211   -1.2031   -1.5919 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9580   -2.3024   -0.1590 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2515   -0.4302    1.3444 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0344   -0.0998    1.6279 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3679   -2.4174    1.1120 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9833   -2.1610   -0.6498 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6872   -1.8176    1.8189 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9417   -2.9141    0.4536 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1574   -1.9962   -0.8703 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1825   -0.9214   -2.0212 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5273   -2.4673   -1.4598 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4658   -1.2111    0.8514 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4771   -1.3308    2.7721 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  2  0
 10 11  1  0
 11 12  2  0
 11 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  1  0
 19 21  1  0
 21 22  1  0
 21  3  1  0
 19  5  1  0
 16  6  1  0
 15  9  1  0
  1 23  1  0
  1 24  1  0
  1 25  1  0
  2 26  1  0
  2 27  1  0
  3 28  1  0
  4 29  1  0
  4 30  1  0
  5 31  1  0
  6 32  1  0
  7 33  1  0
  7 34  1  0
  8 35  1  0
  8 36  1  0
 10 37  1  0
 13 38  1  0
 13 39  1  0
 14 40  1  0
 14 41  1  0
 15 42  1  0
 16 43  1  0
 17 44  1  0
 17 45  1  0
 18 46  1  0
 18 47  1  0
 20 48  1  0
 20 49  1  0
 20 50  1  0
 21 51  1  0
 22 52  1  0
M  END


  Mrv1652309112118122D          

 22 25  0  0  0  0            999 V2000
    1.4323   -1.9485    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0630   -1.4167    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8390   -1.6970    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5218   -1.2340    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1731   -1.7404    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9853   -1.5952    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2655   -0.8192    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0777   -0.6740    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6095   -1.3047    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4216   -1.1595    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9534   -1.7902    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.7655   -1.6450    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.6731   -2.5662    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8610   -2.7114    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3292   -2.0807    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5171   -2.2259    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2368   -3.0018    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4247   -3.1470    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8928   -2.5163    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0683   -2.4895    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5619   -3.1408    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5330   -3.2587    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
 11 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
  9 15  1  0  0  0  0
 15 16  1  0  0  0  0
  6 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
  5 19  1  0  0  0  0
 19 20  1  0  0  0  0
  3 20  1  0  0  0  0
 20 21  1  0  0  0  0
 19 22  1  0  0  0  0
M  END
> <DATABASE_ID>
HMDB0255978

> <DATABASE_NAME>
hmdb

> <SMILES>
CCC1CC2C3CCC4=CC(=O)CCC4C3CCC2(C)C1O

> <INCHI_IDENTIFIER>
InChI=1S/C20H30O2/c1-3-12-11-18-17-6-4-13-10-14(21)5-7-15(13)16(17)8-9-20(18,2)19(12)22/h10,12,15-19,22H,3-9,11H2,1-2H3

> <INCHI_KEY>
FCKLFGKATYPJPG-UHFFFAOYSA-N

> <FORMULA>
C20H30O2

> <MOLECULAR_WEIGHT>
302.458

> <EXACT_MASS>
302.224580206

> <JCHEM_ACCEPTOR_COUNT>
2

> <JCHEM_ATOM_COUNT>
52

> <JCHEM_AVERAGE_POLARIZABILITY>
36.22128509624617

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
13-ethyl-14-hydroxy-15-methyltetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadec-6-en-5-one

> <ALOGPS_LOGP>
3.37

> <JCHEM_LOGP>
3.8749176690000016

> <ALOGPS_LOGS>
-4.14

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
19.278763760719922

> <JCHEM_PKA_STRONGEST_BASIC>
-0.4845866360224712

> <JCHEM_POLAR_SURFACE_AREA>
37.3

> <JCHEM_REFRACTIVITY>
89.0273

> <JCHEM_ROTATABLE_BOND_COUNT>
1

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
2.17e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
13-ethyl-14-hydroxy-15-methyltetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadec-6-en-5-one

> <JCHEM_VEBER_RULE>
1

$$$$

HMDB0255978
     RDKit          3D
Oxendolone
 52 55  0  0  0  0  0  0  0  0999 V2000
    5.3228    0.5179    0.0525 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0094    1.1233   -0.3664 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9670    0.9168    0.6940 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6403    1.5161    0.2955 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9016    0.3859   -0.4397 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5499    0.5746   -0.3205 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8853    1.9926    0.1666 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3052    2.2754   -0.2586 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1583    1.0752   -0.2035 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3875    1.1799   -0.6938 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3147    0.0438   -0.6863 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5522    0.1857   -0.6685 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7463   -1.3140   -0.7007 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2413   -1.3147   -0.5768 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7501   -0.2268    0.3530 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2817   -0.3647    0.5770 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8344   -1.7786    0.3552 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6278   -1.8554    0.6987 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4887   -0.8844    0.0041 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1815   -1.6111   -1.1600 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6199   -0.5039    0.9557 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0977   -0.5869    2.2459 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.2657   -0.5879    0.1217 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0737    0.8341   -0.7240 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6919    0.9807    0.9998 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7300    0.7887   -1.3618 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1741    2.2329   -0.4356 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3396    1.3808    1.6290 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1287    1.8304    1.2004 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7732    2.3997   -0.3608 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1861    0.5566   -1.5228 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0545    0.5072   -1.3306 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8992    2.0108    1.2957 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2333    2.7472   -0.2681 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3118    2.7675   -1.2556 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7346    3.0292    0.4534 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7444    2.1304   -1.1219 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2476   -1.9061    0.0864 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0098   -1.7765   -1.6833 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8211   -1.2031   -1.5919 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9580   -2.3024   -0.1590 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2515   -0.4302    1.3444 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0344   -0.0998    1.6279 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3679   -2.4174    1.1120 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9833   -2.1610   -0.6498 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6872   -1.8176    1.8189 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9417   -2.9141    0.4536 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1574   -1.9962   -0.8703 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1825   -0.9214   -2.0212 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5273   -2.4673   -1.4598 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4658   -1.2111    0.8514 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4771   -1.3308    2.7721 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  2  0
 10 11  1  0
 11 12  2  0
 11 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  1  0
 19 21  1  0
 21 22  1  0
 21  3  1  0
 19  5  1  0
 16  6  1  0
 15  9  1  0
  1 23  1  0
  1 24  1  0
  1 25  1  0
  2 26  1  0
  2 27  1  0
  3 28  1  0
  4 29  1  0
  4 30  1  0
  5 31  1  0
  6 32  1  0
  7 33  1  0
  7 34  1  0
  8 35  1  0
  8 36  1  0
 10 37  1  0
 13 38  1  0
 13 39  1  0
 14 40  1  0
 14 41  1  0
 15 42  1  0
 16 43  1  0
 17 44  1  0
 17 45  1  0
 18 46  1  0
 18 47  1  0
 20 48  1  0
 20 49  1  0
 20 50  1  0
 21 51  1  0
 22 52  1  0
M  END

HEADER    PROTEIN                                 11-SEP-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   11-SEP-21         0                                  
HETATM    1  C   UNK     0       2.674  -3.637   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       3.851  -2.645   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       5.299  -3.168   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       6.574  -2.304   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       7.790  -3.249   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       9.306  -2.978   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       9.829  -1.529   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      11.345  -1.258   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      12.338  -2.436   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      13.854  -2.164   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      14.846  -3.342   0.000  0.00  0.00           C+0
HETATM   12  O   UNK     0      16.362  -3.071   0.000  0.00  0.00           O+0
HETATM   13  C   UNK     0      14.323  -4.790   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      12.807  -5.061   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      11.814  -3.884   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      10.299  -4.155   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       9.775  -5.603   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       8.259  -5.874   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       7.267  -4.697   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       5.727  -4.647   0.000  0.00  0.00           C+0
HETATM   21  O   UNK     0       4.782  -5.863   0.000  0.00  0.00           O+0
HETATM   22  C   UNK     0       6.595  -6.083   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4   20                                                  
CONECT    4    3    5                                                       
CONECT    5    4    6   19                                                  
CONECT    6    5    7   16                                                  
CONECT    7    6    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10   15                                                  
CONECT   10    9   11                                                       
CONECT   11   10   12   13                                                  
CONECT   12   11                                                            
CONECT   13   11   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14    9   16                                                  
CONECT   16   15    6   17                                                  
CONECT   17   16   18                                                       
CONECT   18   17   19                                                       
CONECT   19   18    5   20   22                                             
CONECT   20   19    3   21                                                  
CONECT   21   20                                                            
CONECT   22   19                                                            
MASTER        0    0    0    0    0    0    0    0   22    0   50    0
END

COMPND    HMDB0255978
HETATM    1  C1  UNL     1       5.323   0.518   0.053  1.00  0.00           C  
HETATM    2  C2  UNL     1       4.009   1.123  -0.366  1.00  0.00           C  
HETATM    3  C3  UNL     1       2.967   0.917   0.694  1.00  0.00           C  
HETATM    4  C4  UNL     1       1.640   1.516   0.296  1.00  0.00           C  
HETATM    5  C5  UNL     1       0.902   0.386  -0.440  1.00  0.00           C  
HETATM    6  C6  UNL     1      -0.550   0.575  -0.320  1.00  0.00           C  
HETATM    7  C7  UNL     1      -0.885   1.993   0.167  1.00  0.00           C  
HETATM    8  C8  UNL     1      -2.305   2.275  -0.259  1.00  0.00           C  
HETATM    9  C9  UNL     1      -3.158   1.075  -0.204  1.00  0.00           C  
HETATM   10  C10 UNL     1      -4.387   1.180  -0.694  1.00  0.00           C  
HETATM   11  C11 UNL     1      -5.315   0.044  -0.686  1.00  0.00           C  
HETATM   12  O1  UNL     1      -6.552   0.186  -0.668  1.00  0.00           O  
HETATM   13  C12 UNL     1      -4.746  -1.314  -0.701  1.00  0.00           C  
HETATM   14  C13 UNL     1      -3.241  -1.315  -0.577  1.00  0.00           C  
HETATM   15  C14 UNL     1      -2.750  -0.227   0.353  1.00  0.00           C  
HETATM   16  C15 UNL     1      -1.282  -0.365   0.577  1.00  0.00           C  
HETATM   17  C16 UNL     1      -0.834  -1.779   0.355  1.00  0.00           C  
HETATM   18  C17 UNL     1       0.628  -1.855   0.699  1.00  0.00           C  
HETATM   19  C18 UNL     1       1.489  -0.884   0.004  1.00  0.00           C  
HETATM   20  C19 UNL     1       2.181  -1.611  -1.160  1.00  0.00           C  
HETATM   21  C20 UNL     1       2.620  -0.504   0.956  1.00  0.00           C  
HETATM   22  O2  UNL     1       2.098  -0.587   2.246  1.00  0.00           O  
HETATM   23  H1  UNL     1       5.266  -0.588   0.122  1.00  0.00           H  
HETATM   24  H2  UNL     1       6.074   0.834  -0.724  1.00  0.00           H  
HETATM   25  H3  UNL     1       5.692   0.981   1.000  1.00  0.00           H  
HETATM   26  H4  UNL     1       3.730   0.789  -1.362  1.00  0.00           H  
HETATM   27  H5  UNL     1       4.174   2.233  -0.436  1.00  0.00           H  
HETATM   28  H6  UNL     1       3.340   1.381   1.629  1.00  0.00           H  
HETATM   29  H7  UNL     1       1.129   1.830   1.200  1.00  0.00           H  
HETATM   30  H8  UNL     1       1.773   2.400  -0.361  1.00  0.00           H  
HETATM   31  H9  UNL     1       1.186   0.557  -1.523  1.00  0.00           H  
HETATM   32  H10 UNL     1      -1.055   0.507  -1.331  1.00  0.00           H  
HETATM   33  H11 UNL     1      -0.899   2.011   1.296  1.00  0.00           H  
HETATM   34  H12 UNL     1      -0.233   2.747  -0.268  1.00  0.00           H  
HETATM   35  H13 UNL     1      -2.312   2.767  -1.256  1.00  0.00           H  
HETATM   36  H14 UNL     1      -2.735   3.029   0.453  1.00  0.00           H  
HETATM   37  H15 UNL     1      -4.744   2.130  -1.122  1.00  0.00           H  
HETATM   38  H16 UNL     1      -5.248  -1.906   0.086  1.00  0.00           H  
HETATM   39  H17 UNL     1      -5.010  -1.776  -1.683  1.00  0.00           H  
HETATM   40  H18 UNL     1      -2.821  -1.203  -1.592  1.00  0.00           H  
HETATM   41  H19 UNL     1      -2.958  -2.302  -0.159  1.00  0.00           H  
HETATM   42  H20 UNL     1      -3.252  -0.430   1.344  1.00  0.00           H  
HETATM   43  H21 UNL     1      -1.034  -0.100   1.628  1.00  0.00           H  
HETATM   44  H22 UNL     1      -1.368  -2.417   1.112  1.00  0.00           H  
HETATM   45  H23 UNL     1      -0.983  -2.161  -0.650  1.00  0.00           H  
HETATM   46  H24 UNL     1       0.687  -1.818   1.819  1.00  0.00           H  
HETATM   47  H25 UNL     1       0.942  -2.914   0.454  1.00  0.00           H  
HETATM   48  H26 UNL     1       3.157  -1.996  -0.870  1.00  0.00           H  
HETATM   49  H27 UNL     1       2.182  -0.921  -2.021  1.00  0.00           H  
HETATM   50  H28 UNL     1       1.527  -2.467  -1.460  1.00  0.00           H  
HETATM   51  H29 UNL     1       3.466  -1.211   0.851  1.00  0.00           H  
HETATM   52  H30 UNL     1       2.477  -1.331   2.772  1.00  0.00           H  
CONECT    1    2   23   24   25
CONECT    2    3   26   27
CONECT    3    4   21   28
CONECT    4    5   29   30
CONECT    5    6   19   31
CONECT    6    7   16   32
CONECT    7    8   33   34
CONECT    8    9   35   36
CONECT    9   10   10   15
CONECT   10   11   37
CONECT   11   12   12   13
CONECT   13   14   38   39
CONECT   14   15   40   41
CONECT   15   16   42
CONECT   16   17   43
CONECT   17   18   44   45
CONECT   18   19   46   47
CONECT   19   20   21
CONECT   20   48   49   50
CONECT   21   22   51
CONECT   22   52
END

HMDB0255978
     RDKit          3D
Oxendolone
 52 55  0  0  0  0  0  0  0  0999 V2000
    5.3228    0.5179    0.0525 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0094    1.1233   -0.3664 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9670    0.9168    0.6940 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6403    1.5161    0.2955 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9016    0.3859   -0.4397 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5499    0.5746   -0.3205 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8853    1.9926    0.1666 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3052    2.2754   -0.2586 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1583    1.0752   -0.2035 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3875    1.1799   -0.6938 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3147    0.0438   -0.6863 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5522    0.1857   -0.6685 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7463   -1.3140   -0.7007 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2413   -1.3147   -0.5768 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7501   -0.2268    0.3530 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2817   -0.3647    0.5770 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8344   -1.7786    0.3552 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6278   -1.8554    0.6987 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4887   -0.8844    0.0041 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1815   -1.6111   -1.1600 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6199   -0.5039    0.9557 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0977   -0.5869    2.2459 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.2657   -0.5879    0.1217 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0737    0.8341   -0.7240 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6919    0.9807    0.9998 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7300    0.7887   -1.3618 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1741    2.2329   -0.4356 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3396    1.3808    1.6290 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1287    1.8304    1.2004 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7732    2.3997   -0.3608 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1861    0.5566   -1.5228 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0545    0.5072   -1.3306 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8992    2.0108    1.2957 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2333    2.7472   -0.2681 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3118    2.7675   -1.2556 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7346    3.0292    0.4534 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7444    2.1304   -1.1219 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2476   -1.9061    0.0864 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0098   -1.7765   -1.6833 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8211   -1.2031   -1.5919 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9580   -2.3024   -0.1590 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2515   -0.4302    1.3444 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0344   -0.0998    1.6279 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3679   -2.4174    1.1120 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9833   -2.1610   -0.6498 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6872   -1.8176    1.8189 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9417   -2.9141    0.4536 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1574   -1.9962   -0.8703 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1825   -0.9214   -2.0212 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5273   -2.4673   -1.4598 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4658   -1.2111    0.8514 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4771   -1.3308    2.7721 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  2  0
 10 11  1  0
 11 12  2  0
 11 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  1  0
 19 21  1  0
 21 22  1  0
 21  3  1  0
 19  5  1  0
 16  6  1  0
 15  9  1  0
  1 23  1  0
  1 24  1  0
  1 25  1  0
  2 26  1  0
  2 27  1  0
  3 28  1  0
  4 29  1  0
  4 30  1  0
  5 31  1  0
  6 32  1  0
  7 33  1  0
  7 34  1  0
  8 35  1  0
  8 36  1  0
 10 37  1  0
 13 38  1  0
 13 39  1  0
 14 40  1  0
 14 41  1  0
 15 42  1  0
 16 43  1  0
 17 44  1  0
 17 45  1  0
 18 46  1  0
 18 47  1  0
 20 48  1  0
 20 49  1  0
 20 50  1  0
 21 51  1  0
 22 52  1  0
M  END

View in JSmol View Stereo Labels

Synonyms

Not Available

Chemical Formula

C₂₀H₃₀O₂

Average Molecular Weight

302.458

Monoisotopic Molecular Weight

302.224580206

IUPAC Name

13-ethyl-14-hydroxy-15-methyltetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadec-6-en-5-one

Traditional Name

13-ethyl-14-hydroxy-15-methyltetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadec-6-en-5-one

CAS Registry Number

Not Available

SMILES

CCC1CC2C3CCC4=CC(=O)CCC4C3CCC2(C)C1O

InChI Identifier

InChI=1S/C20H30O2/c1-3-12-11-18-17-6-4-13-10-14(21)5-7-15(13)16(17)8-9-20(18,2)19(12)22/h10,12,15-19,22H,3-9,11H2,1-2H3

InChI Key

FCKLFGKATYPJPG-UHFFFAOYSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as estrogens and derivatives. These are steroids with a structure containing a 3-hydroxylated estrane.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Steroids and steroid derivatives

Sub Class

Estrane steroids

Direct Parent

Estrogens and derivatives

Alternative Parents

Substituents

Estrogen-skeleton
3-oxo-delta-4-steroid
3-oxosteroid
17-hydroxysteroid
Oxosteroid
Hydroxysteroid
Delta-4-steroid
Cyclohexenone
Cyclic alcohol
Cyclic ketone
Secondary alcohol
Ketone
Organic oxygen compound
Hydrocarbon derivative
Carbonyl group
Organic oxide
Organooxygen compound
Alcohol
Aliphatic homopolycyclic compound

Molecular Framework

Aliphatic homopolycyclic compounds

External Descriptors

Not Available

Ontology

Physiological effect

Not Available

Disposition

Biological location

Non-excretory biofluid

Biofluid or Excreta

Blood (PMID: 31557052)

Source

Exogenous

Exogenous (PMID: 31557052)

Process

Not Available

Role

Not Available

Physical Properties

State

Not Available

Experimental Molecular Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Experimental Chromatographic Properties

Not Available

Predicted Molecular Properties

Property	Value	Source
logP	3.37	ALOGPS
logP	3.87	ChemAxon
logS	-4.1	ALOGPS
pKa (Strongest Acidic)	19.28	ChemAxon
pKa (Strongest Basic)	-0.48	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	2	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	37.3 Å²	ChemAxon
Rotatable Bond Count	1	ChemAxon
Refractivity	89.03 m³·mol⁻¹	ChemAxon
Polarizability	36.22 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	Yes	ChemAxon
MDDR-like Rule	No	ChemAxon

Predicted Chromatographic Properties

Predicted Collision Cross Sections

Predictor	Adduct Type	CCS Value (Å²)	Reference
DeepCCS	[M+H]+	179.333	30932474
DeepCCS	[M-H]-	176.975	30932474
DeepCCS	[M-2H]-	209.861	30932474
DeepCCS	[M+Na]+	185.426	30932474
AllCCS	[M+H]+	178.7	32859911
AllCCS	[M+H-H2O]+	175.6	32859911
AllCCS	[M+NH4]+	181.5	32859911
AllCCS	[M+Na]+	182.3	32859911
AllCCS	[M-H]-	183.7	32859911
AllCCS	[M+Na-2H]-	183.9	32859911
AllCCS	[M+HCOO]-	184.4	32859911

Predicted Retention Times

Underivatized

Chromatographic Method	Retention Time	Reference
Predicted by Siyang on May 30, 2022	17.3346 minutes	33406817
Predicted by Siyang using ReTip algorithm on June 8, 2022	1.67 minutes	32390414
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid	2772.1 seconds	40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid	461.2 seconds	40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid	222.1 seconds	40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid	207.6 seconds	40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid	449.2 seconds	40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid	738.8 seconds	40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid	738.0 seconds	40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)	98.4 seconds	40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid	1414.7 seconds	40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid	509.3 seconds	40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid	1600.6 seconds	40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid	434.1 seconds	40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid	464.2 seconds	40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate	282.6 seconds	40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA	477.3 seconds	40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water	15.2 seconds	40023050

Predicted Kovats Retention Indices

Underivatized

Metabolite	SMILES	Kovats RI Value	Column Type	Reference
Oxendolone	CCC1CC2C3CCC4=CC(=O)CCC4C3CCC2(C)C1O	3625.3	Standard polar	33892256
Oxendolone	CCC1CC2C3CCC4=CC(=O)CCC4C3CCC2(C)C1O	2770.1	Standard non polar	33892256
Oxendolone	CCC1CC2C3CCC4=CC(=O)CCC4C3CCC2(C)C1O	2809.0	Semi standard non polar	33892256

Derivatized

Derivative Name / Structure	SMILES	Kovats RI Value	Column Type	Reference
Oxendolone,2TMS,isomer #1	CCC1CC2C3CCC4=CC(O[Si](C)(C)C)=CCC4C3CCC2(C)C1O[Si](C)(C)C	2748.0	Semi standard non polar	33892256
Oxendolone,2TMS,isomer #1	CCC1CC2C3CCC4=CC(O[Si](C)(C)C)=CCC4C3CCC2(C)C1O[Si](C)(C)C	2784.1	Standard non polar	33892256
Oxendolone,2TMS,isomer #1	CCC1CC2C3CCC4=CC(O[Si](C)(C)C)=CCC4C3CCC2(C)C1O[Si](C)(C)C	3044.8	Standard polar	33892256
Oxendolone,2TBDMS,isomer #1	CCC1CC2C3CCC4=CC(O[Si](C)(C)C(C)(C)C)=CCC4C3CCC2(C)C1O[Si](C)(C)C(C)(C)C	3239.1	Semi standard non polar	33892256
Oxendolone,2TBDMS,isomer #1	CCC1CC2C3CCC4=CC(O[Si](C)(C)C(C)(C)C)=CCC4C3CCC2(C)C1O[Si](C)(C)C(C)(C)C	3278.9	Standard non polar	33892256
Oxendolone,2TBDMS,isomer #1	CCC1CC2C3CCC4=CC(O[Si](C)(C)C(C)(C)C)=CCC4C3CCC2(C)C1O[Si](C)(C)C(C)(C)C	3278.6	Standard polar	33892256

Spectra

GC-MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted GC-MS	Predicted GC-MS Spectrum - Oxendolone GC-MS (Non-derivatized) - 70eV, Positive	splash10-00gi-0290000000-313521d2edd54d346cec	2021-09-23	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - Oxendolone GC-MS (Non-derivatized) - 70eV, Positive	Not Available	2021-10-12	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - Oxendolone GC-MS (TMS_1_1) - 70eV, Positive	Not Available	2021-11-05	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - Oxendolone GC-MS (TMS_1_2) - 70eV, Positive	Not Available	2021-11-05	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - Oxendolone GC-MS (TBDMS_1_1) - 70eV, Positive	Not Available	2021-11-05	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - Oxendolone GC-MS (TBDMS_1_2) - 70eV, Positive	Not Available	2021-11-05	Wishart Lab	View Spectrum

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Blood

Tissue Locations

Not Available

Pathways

Not Available

Name	SMPDB/PathBank	KEGG

Normal Concentrations

Biospecimen	Status	Value	Age	Sex	Condition	Reference	Details
Blood	Detected but not Quantified	Not Quantified	Not Specified	Not Specified	Normal	31557052	details

Abnormal Concentrations

Not Available

Associated Disorders and Diseases

Disease References

None

Associated OMIM IDs

None

External Links

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

4459

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Oxendolone

METLIN ID

Not Available

PubChem Compound

4620

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

VMH ID

Not Available

MarkerDB ID

Not Available

Good Scents ID

Not Available

References

Synthesis Reference

Not Available

Material Safety Data Sheet (MSDS)

Not Available

General References

Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]

Showing metabocard for Oxendolone (HMDB0255978)

MOL for HMDB0255978 (Oxendolone)

3D MOL for HMDB0255978 (Oxendolone)

3D SDF for HMDB0255978 (Oxendolone)

3D-SDF for HMDB0255978 (Oxendolone)

PDB for HMDB0255978 (Oxendolone)

3D PDB for HMDB0255978 (Oxendolone)

SMILES for HMDB0255978 (Oxendolone)

INCHI for HMDB0255978 (Oxendolone)

Structure for HMDB0255978 (Oxendolone)

3D Structure for HMDB0255978 (Oxendolone)

Predicted Collision Cross Sections

Predicted Retention Times

Underivatized

Predicted Kovats Retention Indices

Underivatized

Derivatized

GC-MS Spectra