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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2021-09-24 09:18:02 UTC
Update Date2021-09-24 09:18:02 UTC
HMDB IDHMDB0304374
Secondary Accession NumbersNone
Metabolite Identification
Common Nameglutathioselenol
DescriptionGlutathioselenol is a member of the class of compounds known as oligopeptides. Oligopeptides are organic compounds containing a sequence of between three and ten alpha-amino acids joined by peptide bonds. Glutathioselenol is slightly soluble (in water) and a moderately acidic compound (based on its pKa). Glutathioselenol can be found in a number of food items such as lemon, sorghum, amaranth, and wasabi, which makes glutathioselenol a potential biomarker for the consumption of these food products.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC10H12N3O6SSe
Average Molecular Weight381.25
Monoisotopic Molecular Weight381.961752
IUPAC Name{[2-(4-azaniumyl-4-carboxylatobutanamido)-2-[(carboxylatomethyl)carbamoyl]ethyl]selanylsulfanyl}-λ¹-selanyl
Traditional Name[2-(4-ammonio-4-carboxylatobutanamido)-2-(carboxylatomethylcarbamoyl)ethylselanylsulfanyl]-λ¹-selanyl
CAS Registry NumberNot Available
SMILES
[N+]C(CCC(=O)NC(CS[Se])C(=O)NCC([O-])=O)C([O-])=O
InChI Identifier
InChI=1S/C10H14N3O6SSe/c11-5(10(18)19)1-2-7(14)13-6(4-20-21)9(17)12-3-8(15)16/h5-6H,1-4H2,(H,12,17)(H,13,14)(H,15,16)(H,18,19)/q+1/p-2
InChI KeyDEMSGYOFKOCSNU-UHFFFAOYSA-L
Chemical Taxonomy
Description Belongs to the class of organic compounds known as oligopeptides. These are organic compounds containing a sequence of between three and ten alpha-amino acids joined by peptide bonds.
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassCarboxylic acids and derivatives
Sub ClassAmino acids, peptides, and analogues
Direct ParentOligopeptides
Alternative Parents
Substituents
  • Alpha-oligopeptide
  • Gamma-glutamyl alpha peptide
  • Glutamine or derivatives
  • N-acyl-alpha amino acid or derivatives
  • N-acyl-alpha-amino acid
  • Alpha-amino acid amide
  • Cysteine or derivatives
  • N-substituted-alpha-amino acid
  • Alpha-amino acid or derivatives
  • N-acyl-amine
  • Fatty acyl
  • Fatty amide
  • Fatty acid
  • Dicarboxylic acid or derivatives
  • Carboxamide group
  • Secondary carboxylic acid amide
  • Carboxylic acid salt
  • Carboxylic acid
  • Sulfenyl compound
  • Organosulfur compound
  • Organic nitrogen compound
  • Organic salt
  • Hydrocarbon derivative
  • Organic oxide
  • Carbonyl group
  • Organopnictogen compound
  • Organic oxygen compound
  • Organooxygen compound
  • Organonitrogen compound
  • Organic anion
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Source
Process
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP-1.9ALOGPS
logP-3.5ChemAxon
logS-2.1ALOGPS
pKa (Strongest Acidic)1.3ChemAxon
pKa (Strongest Basic)-1.9ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count7ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area161.52 ŲChemAxon
Rotatable Bond Count10ChemAxon
Refractivity101.59 m³·mol⁻¹ChemAxon
Polarizability29.81 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
AllCCS[M+H]+168.69932859911
AllCCS[M+H-H2O]+166.36132859911
AllCCS[M+Na]+171.46332859911
AllCCS[M+NH4]+170.84932859911
AllCCS[M-H]-161.05832859911
AllCCS[M+Na-2H]-160.97832859911
AllCCS[M+HCOO]-161.01432859911
DeepCCS[M+H]+166.87630932474
DeepCCS[M-H]-164.51830932474
DeepCCS[M-2H]-197.40430932474
DeepCCS[M+Na]+172.96930932474

Predicted Retention Times

Underivatized

Chromatographic MethodRetention TimeReference
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid1239.2 seconds40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid232.7 seconds40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid81.9 seconds40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid151.4 seconds40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid57.0 seconds40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid245.7 seconds40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid352.7 seconds40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)201.3 seconds40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid665.7 seconds40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid258.7 seconds40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid1103.4 seconds40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid218.0 seconds40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid217.7 seconds40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate525.7 seconds40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA160.3 seconds40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water262.9 seconds40023050

Predicted Kovats Retention Indices

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
glutathioselenol,1TMS,isomer #1C[Si](C)(C)N(C(=O)CCC([N+])C(=O)[O-])C(CS[Se])C(=O)NCC(=O)[O-]2743.8Semi standard non polar33892256
glutathioselenol,1TMS,isomer #1C[Si](C)(C)N(C(=O)CCC([N+])C(=O)[O-])C(CS[Se])C(=O)NCC(=O)[O-]2743.2Standard non polar33892256
glutathioselenol,1TMS,isomer #1C[Si](C)(C)N(C(=O)CCC([N+])C(=O)[O-])C(CS[Se])C(=O)NCC(=O)[O-]4025.5Standard polar33892256
glutathioselenol,1TMS,isomer #2C[Si](C)(C)N(CC(=O)[O-])C(=O)C(CS[Se])NC(=O)CCC([N+])C(=O)[O-]2783.2Semi standard non polar33892256
glutathioselenol,1TMS,isomer #2C[Si](C)(C)N(CC(=O)[O-])C(=O)C(CS[Se])NC(=O)CCC([N+])C(=O)[O-]2726.6Standard non polar33892256
glutathioselenol,1TMS,isomer #2C[Si](C)(C)N(CC(=O)[O-])C(=O)C(CS[Se])NC(=O)CCC([N+])C(=O)[O-]3970.9Standard polar33892256
glutathioselenol,2TMS,isomer #1C[Si](C)(C)N(CC(=O)[O-])C(=O)C(CS[Se])N(C(=O)CCC([N+])C(=O)[O-])[Si](C)(C)C2752.7Semi standard non polar33892256
glutathioselenol,2TMS,isomer #1C[Si](C)(C)N(CC(=O)[O-])C(=O)C(CS[Se])N(C(=O)CCC([N+])C(=O)[O-])[Si](C)(C)C2785.3Standard non polar33892256
glutathioselenol,2TMS,isomer #1C[Si](C)(C)N(CC(=O)[O-])C(=O)C(CS[Se])N(C(=O)CCC([N+])C(=O)[O-])[Si](C)(C)C3619.2Standard polar33892256
glutathioselenol,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)N(C(=O)CCC([N+])C(=O)[O-])C(CS[Se])C(=O)NCC(=O)[O-]3055.5Semi standard non polar33892256
glutathioselenol,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)N(C(=O)CCC([N+])C(=O)[O-])C(CS[Se])C(=O)NCC(=O)[O-]2965.1Standard non polar33892256
glutathioselenol,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)N(C(=O)CCC([N+])C(=O)[O-])C(CS[Se])C(=O)NCC(=O)[O-]3962.7Standard polar33892256
glutathioselenol,1TBDMS,isomer #2CC(C)(C)[Si](C)(C)N(CC(=O)[O-])C(=O)C(CS[Se])NC(=O)CCC([N+])C(=O)[O-]3069.8Semi standard non polar33892256
glutathioselenol,1TBDMS,isomer #2CC(C)(C)[Si](C)(C)N(CC(=O)[O-])C(=O)C(CS[Se])NC(=O)CCC([N+])C(=O)[O-]2937.5Standard non polar33892256
glutathioselenol,1TBDMS,isomer #2CC(C)(C)[Si](C)(C)N(CC(=O)[O-])C(=O)C(CS[Se])NC(=O)CCC([N+])C(=O)[O-]3957.4Standard polar33892256
glutathioselenol,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)N(CC(=O)[O-])C(=O)C(CS[Se])N(C(=O)CCC([N+])C(=O)[O-])[Si](C)(C)C(C)(C)C3274.7Semi standard non polar33892256
glutathioselenol,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)N(CC(=O)[O-])C(=O)C(CS[Se])N(C(=O)CCC([N+])C(=O)[O-])[Si](C)(C)C(C)(C)C3184.2Standard non polar33892256
glutathioselenol,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)N(CC(=O)[O-])C(=O)C(CS[Se])N(C(=O)CCC([N+])C(=O)[O-])[Si](C)(C)C(C)(C)C3632.3Standard polar33892256
Spectra

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - glutathioselenol 10V, Negative-QTOFsplash10-0089-3229000000-62d1c13a4ba9458f24802019-02-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - glutathioselenol 20V, Negative-QTOFsplash10-00kf-9834000000-0487b34bb04820a07c612019-02-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - glutathioselenol 40V, Negative-QTOFsplash10-0h93-9310000000-d03add9d6dc91850964c2019-02-23Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB030891
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General ReferencesNot Available