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Human Metabolome Database Version 2.5

 

Showing metabocard for Leucodopachrome (HMDB04067)

Legend: metabolite field enzyme field

Version 2.5
Creation Date 2006-08-13 11:14:47
Update Date 2009-05-05 20:59:58
Accession Number HMDB04067
Secondary Accession Numbers HMDB06340
Common Name Leucodopachrome
Description Leucodopachrome is an indolic intermediate in the melanogenesis pathway, the non-enzymatically product of dopaquinone through cyclization in a reaction whose operation is determined by a pH greater than 4 (melanin synthesis in human pigment cell lysates is maximal at pH 6.8). Leucodopachrome participates in redox exchange with dopaquinone to give the eumelanin precursor dopachrome plus dopa. Dopaquinone (the quinone intermediate resulting from tyrosinase-mediated oxidation of tyrosine, monophenol dihydroxyphenylalanine:oxygen oxidoreductase, EC 1.14.18.1) could be a toxic metabolite in melanin biosynthesis. (PMID: 6807981, 1445949, 413870, 11461115, 11171088, 12755639)
Synonyms
  1. cyclodopa
  2. 2-Carboxy-2,3-dihydro-5,6-dihydroxyindole
  3. 2,3-Dihydro-5,6-dihydroxyindole-2-carboxylate
Chemical IUPAC Name (2S)-5,6-dihydroxy-2,3-dihydro-1H-indole-2-carboxylic acid
Chemical Formula C9H9NO4
Chemical Structure Structure
Chemical Taxonomy
Kingdom
  • Organic
Super Class
  • Amino acids and Amino Acid conjugates
Class
  • Indoles and Indole Derivatives
Sub Class
  • NA
Family
  • Mammalian Metabolite
Species
  • phenol or hydroxyhetarene
  • 1,2-diphenol
  • secondary amine
  • secondary aliphatic/aromatic amine (alkylarylamine)
  • carboxylic acid
  • aromatic compound
  • heterocyclic compound
  • alpha-aminoacid
Biofunction
  • Protein synthesis, amino acid biosynthesis
Application
Source
  • Endogenous
Average Molecular Weight 195.172
Monoisotopic Molecular Weight 195.053162
Isomeric SMILES OC(=O)[C@@H]1CC2=CC(O)=C(O)C=C2N1
Canonical SMILES OC(=O)C1CC2=CC(O)=C(O)C=C2N1
KEGG Compound ID C05604 Link Image
BioCyc ID Not Available
BiGG ID 46110 Link Image
Wikipedia Link Not Available
NuGOwiki Link HMDB04067 Link Image
Metagene Link HMDB04067 Link Image
METLIN ID Not Available
PubChem Compound 161255 Link Image
PubChem Substance 7927 Link Image
ChEBI ID Not Available
CAS Registry Number 18766-67-1
InChI Identifier InChI=1/C9H9NO4/c11-7-2-4-1-6(9(13)14)10-5(4)3-8(7)12/h2-3,6,10-12H,1H2,(H,13,14)/t6-/m0/s1
Synthesis Reference Not Available
Melting Point (Experimental) Not Available
Experimental Water Solubility Not Available Source: PhysProp
Predicted Water Solubility 11.4 mg/mL [Predicted by ALOGPS] Calculated using ALOGPS
Physiological Charge -1
State Solid
Experimental LogP/Hydrophobicity -0.037 Source: PhysProp
Predicted LogP/Hydrophobicity -1.6 [Predicted by PubChem via XLOGP]; 1.10 [Predicted by ALOGPS] Calculated using ALOGPS
Material Safety Data Sheet (MSDS) Not Available
MOL File Show Link Image
SDF File Show Link Image
PDB File Show Link Image
2D Structure
3D Structure
Experimental PDB ID Not Available
Experimental 1H NMR Spectrum Not Available
Experimental 13C NMR Spectrum Not Available
Experimental 13C HSQC Spectrum Not Available
Predicted 1H NMR Spectrum Show Image
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Predicted 13C NMR Spectrum Show Image
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Mass Spectrum Not Available
Simplified TOCSY Spectrum Not Available
BMRB Spectrum Not Available
Cellular Location Not Available
Biofluid Location Not Available
Tissue Location Not Available
Concentrations (Normal) Not Available
Concentrations (Abnormal) Not Available
Associated Disorders Not Available
OMIM ID Not Available
Pathways
Name SMPDB Link KEGG Link
Tyrosine Metabolism SMP00006 Link Image map00350 Link Image
General References Not Available