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Human Metabolome Database Version 2.5

 

Showing metabocard for 7-Hydroxy-6-methyl-8-ribityl lumazine (HMDB04256)

Legend: metabolite field enzyme field

Version 2.5
Creation Date 2006-08-13 16:24:43
Update Date 2009-05-05 21:00:03
Accession Number HMDB04256
Secondary Accession Numbers Not Available
Common Name 7-Hydroxy-6-methyl-8-ribityl lumazine
Description 7-Hydroxy-6-methyl-8-ribityl lumazine is an intermediate in Riboflavin metabolism. it is converted from 6,7-Dimethyl-8-(1-D-ribityl)lumazine.
Synonyms
  1. CRM
Chemical IUPAC Name 6-methyl-8-[(2S,3S,4R)-2,3,4,5-tetrahydroxypentyl]-1H-pteridine-2,4,7-trione
Chemical Formula C12H16N4O7
Chemical Structure Structure
Chemical Taxonomy
Kingdom
  • Organic
Super Class
Class
Sub Class
Family
  • Mammalian Metabolite
Species
  • primary alcohol
  • secondary alcohol
  • 1,2-diol
  • phenol or hydroxyhetarene
  • oxo(het)arene
  • aromatic compound
  • heterocyclic compound
Biofunction
Application
Source
  • Endogenous
Average Molecular Weight 328.278
Monoisotopic Molecular Weight 328.101898
Isomeric SMILES CC1=C(O)N(C[C@H](O)[C@H](O)[C@H](O)CO)C2=NC(=O)NC(=O)C2=N1
Canonical SMILES CC1=C(O)N(CC(O)C(O)C(O)CO)C2=NC(=O)NC(=O)C2=N1
KEGG Compound ID C05995 Link Image
BioCyc ID Not Available
BiGG ID Not Available
Wikipedia Link Not Available
NuGOwiki Link HMDB04256 Link Image
Metagene Link HMDB04256 Link Image
METLIN ID Not Available
PubChem Compound 440869 Link Image
PubChem Substance 6436702 Link Image
ChEBI ID Not Available
CAS Registry Number Not Available
InChI Identifier InChI=1/C12H16N4O7/c1-4-11(22)16(2-5(18)8(20)6(19)3-17)9-7(13-4)10(21)15-12(23)14-9/h5-6,8,17-20,22H,2-3H2,1H3,(H,15,21,23)/t5-,6+,8-/m0/s1
Synthesis Reference Not Available
Melting Point (Experimental) Not Available
Experimental Water Solubility Not Available Source: PhysProp
Predicted Water Solubility 1.85 mg/mL [Predicted by ALOGPS] Calculated using ALOGPS
Physiological Charge -1
State Solid
Experimental LogP/Hydrophobicity -4.193 Source: PhysProp
Predicted LogP/Hydrophobicity -2.12 [Predicted by ALOGPS] Calculated using ALOGPS
Material Safety Data Sheet (MSDS) Not Available
MOL File Show
SDF File Show
PDB File Show
2D Structure
3D Structure
Experimental PDB ID Not Available
Experimental 1H NMR Spectrum Not Available
Experimental 13C NMR Spectrum Not Available
Experimental 13C HSQC Spectrum Not Available
Predicted 1H NMR Spectrum Not Available
Not Available
Predicted 13C NMR Spectrum Not Available
Not Available
Mass Spectrum Not Available
Simplified TOCSY Spectrum Not Available
BMRB Spectrum Not Available
Cellular Location Not Available
Biofluid Location Not Available
Tissue Location Not Available
Concentrations (Normal) Not Available
Concentrations (Abnormal) Not Available
Associated Disorders Not Available
OMIM ID Not Available
Pathways
Name SMPDB Link KEGG Link
Riboflavin Metabolism SMP00070 Link Image map00740 Link Image
General References Not Available