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Human Metabolome Database Version 3.5

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Showing metabocard for PE(18:4(6Z,9Z,12Z,15Z)/18:4(6Z,9Z,12Z,15Z)) (HMDB09195)

Record Information
Version 3.5
Creation Date 2008-09-11 19:49:47 -0600
Update Date 2013-02-08 17:21:33 -0700
HMDB ID HMDB09195
Secondary Accession Numbers None
Metabolite Identification
Common Name PE(18:4(6Z,9Z,12Z,15Z)/18:4(6Z,9Z,12Z,15Z))
Description PE(18:4(6Z,9Z,12Z,15Z)/18:4(6Z,9Z,12Z,15Z)) is a phosphatidylethanolamine (PE or GPEtn). It is a glycerophospholipid in which a phosphorylethanolamine moiety occupies a glycerol substitution site. As is the case with diacylglycerols, glycerophosphoethanolamines can have many different combinations of fatty acids of varying lengths and saturation attached at the C-1 and C-2 positions. Fatty acids containing 16, 18 and 20 carbons are the most common. PE(18:4(6Z,9Z,12Z,15Z)/18:4(6Z,9Z,12Z,15Z)), in particular, consists of two chains of stearidonic acid at the C-1 and C-2 positions. The stearidonic acid moieties are derived from seed oils. Phospholipids, are ubiquitous in nature and are key components of the lipid bilayer of cells, as well as being involved in metabolism and signaling.While most phospholipids have a saturated fatty acid on C-1 and an unsaturated fatty acid on C-2 of the glycerol backbone, the fatty acid distribution at the C-1 and C-2 positions of glycerol within phospholipids is continually in flux, owing to phospholipid degradation and the continuous phospholipid remodeling that occurs while these molecules are in membranes. PEs are neutral zwitterions at physiological pH. They mostly have palmitic or stearic acid on carbon 1 and a long chain unsaturated fatty acid (e.g. 18:2, 20:4 and 22:6) on carbon 2. PE synthesis can occur via two pathways. The first requires that ethanolamine be activated by phosphorylation and then coupled to CDP. The ethanolamine is then transferred from CDP-ethanolamine to phosphatidic acid to yield PE. The second involves the decarboxylation of PS.
Structure Thumb
Download: MOL | SDF | SMILES | InChI
Display: 2D Structure | 3D Structure
Synonyms
  1. 1,2-Distearidonoyl-rac-glycero-3-phosphoethanolamine
  2. GPEtn(18:4/18:4)
  3. GPEtn(18:4n3/18:4n3)
  4. GPEtn(18:4w3/18:4w3)
  5. GPEtn(36:8)
  6. PE(18:4/18:4)
  7. PE(18:4n3/18:4n3)
  8. PE(18:4w3/18:4w3)
  9. PE(36:8)
  10. Phophatidylethanolamine(18:4/18:4)
  11. Phophatidylethanolamine(18:4n3/18:4n3)
  12. Phophatidylethanolamine(18:4w3/18:4w3)
  13. Phophatidylethanolamine(36:8)
Chemical Formula C41H66NO8P
Average Molecular Weight 731.9384
Monoisotopic Molecular Weight 731.452604605
IUPAC Name (2-aminoethoxy)[(2R)-2,3-bis[(6Z,9Z,12Z,15Z)-octadeca-6,9,12,15-tetraenoyloxy]propoxy]phosphinic acid
Traditional IUPAC Name 2-aminoethoxy(2R)-2,3-bis[(6Z,9Z,12Z,15Z)-octadeca-6,9,12,15-tetraenoyloxy]propoxyphosphinic acid
CAS Registry Number Not Available
SMILES [H][C@@](COC(=O)CCCC\C=C/C\C=C/C\C=C/C\C=C/CC)(COP(O)(=O)OCCN)OC(=O)CCCC\C=C/C\C=C/C\C=C/C\C=C/CC
InChI Identifier InChI=1S/C41H66NO8P/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-31-33-40(43)47-37-39(38-49-51(45,46)48-36-35-42)50-41(44)34-32-30-28-26-24-22-20-18-16-14-12-10-8-6-4-2/h5-8,11-14,17-20,23-26,39H,3-4,9-10,15-16,21-22,27-38,42H2,1-2H3,(H,45,46)/b7-5-,8-6-,13-11-,14-12-,19-17-,20-18-,25-23-,26-24-/t39-/m1/s1
InChI Key XPVPRBUMVPRRIJ-FWANEPEWSA-N
Chemical Taxonomy
Kingdom Organic Compounds
Super Class Lipids
Class Glycerophospholipids
Sub Class Glycerophosphoethanolamines
Other Descriptors
  • Aliphatic Acyclic Compounds
Substituents
  • Acyclic Alkene
  • Carboxylic Acid Ester
  • Dicarboxylic Acid Derivative
  • Fatty Acid Ester
  • Organic Hypophosphite
  • Organic Phosphite
  • Phosphoethanolamine
  • Phosphoric Acid Ester
  • Primary Aliphatic Amine (Alkylamine)
Direct Parent Phosphatidylethanolamines
Ontology
Status Expected and Not Quantified
Origin
  • Endogenous
  • Food
Biofunction
  • Cell signaling
  • Energy source
  • Fuel and energy storage
  • Fuel or energy source
  • Membrane component
  • Membrane integrity/stability
Application
  • Nutrients
  • Stabilizers
  • Surfactants and Emulsifiers
Cellular locations
  • Extracellular
  • Membrane
Physical Properties
State Solid
Experimental Properties
Property Value Reference
Melting Point Not Available Not Available
Boiling Point Not Available Not Available
Water Solubility Not Available Not Available
LogP Not Available Not Available
Predicted Properties
Property Value Source
Water Solubility 1.380E-04 g/L ALOGPS
LogP 7.42 ALOGPS
LogP 9.33 ChemAxon
LogS -6.73 ALOGPS
pKa (strongest acidic) 1.87 ChemAxon
pKa (strongest basic) 10 ChemAxon
Hydrogen Acceptor Count 5 ChemAxon
Hydrogen Donor Count 2 ChemAxon
Polar Surface Area 134.38 A2 ChemAxon
Rotatable Bond Count 35 ChemAxon
Refractivity 218.34 ChemAxon
Polarizability 82.62 ChemAxon
Formal Charge 0 ChemAxon
Physiological Charge 0 ChemAxon
Spectra
Not Available
Biological Properties
Cellular Locations
  • Extracellular
  • Membrane
Biofluid Locations Not Available
Tissue Location
  • All Tissues
  • Brain
Pathways Not Available
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Predicted Concentrations Help
Biofluid Value Original age Original sex Original condition Comments
Blood 0.000009930 +/- 0.000008860 uM Adult (>18 years old) Both Normal (Most Probable) Calculated using MetaboAnalyst
Blood 0.033333333 +/- 0.028867513 uM Adult (>18 years old) Both Normal (Upper Limit) Calculated using MetaboAnalyst
Associated Disorders and Diseases
Disease References None
Associated OMIM IDs None
DrugBank ID Not Available
Phenol Explorer Compound ID Not Available
Phenol Explorer Metabolite ID Not Available
FoodDB ID FDB026385
KNApSAcK ID Not Available
Chemspider ID 24768657 Link_out
KEGG Compound ID C00350 Link_out
BioCyc ID L-1-PHOSPHATIDYL-ETHANOLAMINE Link_out
BiGG ID Not Available
Wikipedia Link Lecithin Link_out
NuGOwiki Link HMDB09195 Link_out
Metagene Link HMDB09195 Link_out
METLIN ID Not Available
PubChem Compound 52924455 Link_out
PDB ID Not Available
ChEBI ID Not Available
References
Synthesis Reference Not Available
Material Safety Data Sheet (MSDS) Not Available
General References Not Available

Enzymes
Name: Calcium-dependent phospholipase A2
Reactions:
    Gene Name: PLA2G5
    Uniprot ID: P39877 Link_out
    Protein Sequence: FASTA
    Gene Sequence: FASTA
    Name: Group IIF secretory phospholipase A2
    Reactions:
      Gene Name: PLA2G2F
      Uniprot ID: Q9BZM2 Link_out
      Protein Sequence: FASTA
      Gene Sequence: FASTA
      Name: Cytosolic phospholipase A2
      Reactions:
        Gene Name: PLA2G4A
        Uniprot ID: P47712 Link_out
        Protein Sequence: FASTA
        Gene Sequence: FASTA
        Name: Phospholipase A2
        Reactions:
          Gene Name: PLA2G1B
          Uniprot ID: P04054 Link_out
          Protein Sequence: FASTA
          Gene Sequence: FASTA
          Name: Group XIIB secretory phospholipase A2-like protein
          Reactions:
            Gene Name: PLA2G12B
            Uniprot ID: Q9BX93 Link_out
            Protein Sequence: FASTA
            Gene Sequence: FASTA
            Name: Group 10 secretory phospholipase A2
            Reactions:
              Gene Name: PLA2G10
              Uniprot ID: O15496 Link_out
              Protein Sequence: FASTA
              Gene Sequence: FASTA
              Name: Group IIE secretory phospholipase A2
              Reactions:
                Gene Name: PLA2G2E
                Uniprot ID: Q9NZK7 Link_out
                Protein Sequence: FASTA
                Gene Sequence: FASTA
                Name: 85 kDa calcium-independent phospholipase A2
                Reactions:
                  Gene Name: PLA2G6
                  Uniprot ID: O60733 Link_out
                  Protein Sequence: FASTA
                  Gene Sequence: FASTA
                  Name: Group IID secretory phospholipase A2
                  Reactions:
                    Gene Name: PLA2G2D
                    Uniprot ID: Q9UNK4 Link_out
                    Protein Sequence: FASTA
                    Gene Sequence: FASTA
                    Name: Phospholipase D2
                    Reactions:
                      Gene Name: PLD2
                      Uniprot ID: O14939 Link_out
                      Protein Sequence: FASTA
                      Gene Sequence: FASTA
                      Name: Phosphatidylethanolamine N-methyltransferase
                      Reactions:
                        Gene Name: PEMT
                        Uniprot ID: Q9UBM1 Link_out
                        Protein Sequence: FASTA
                        Gene Sequence: FASTA
                        Name: Phospholipase D1
                        Reactions:
                          Gene Name: PLD1
                          Uniprot ID: Q13393 Link_out
                          Protein Sequence: FASTA
                          Gene Sequence: FASTA
                          Name: Group 3 secretory phospholipase A2
                          Reactions:
                            Gene Name: PLA2G3
                            Uniprot ID: Q9NZ20 Link_out
                            Protein Sequence: FASTA
                            Gene Sequence: FASTA
                            Name: Probable phospholipid-transporting ATPase IG
                            Reactions:
                              Gene Name: ATP11C
                              Uniprot ID: Q8NB49 Link_out
                              Protein Sequence: FASTA
                              Gene Sequence: FASTA
                              Name: Probable phospholipid-transporting ATPase IH
                              Reactions:
                                Gene Name: ATP11A
                                Uniprot ID: P98196 Link_out
                                Protein Sequence: FASTA
                                Gene Sequence: FASTA
                                Name: Probable phospholipid-transporting ATPase VA
                                Reactions:
                                  Gene Name: ATP10A
                                  Uniprot ID: O60312 Link_out
                                  Protein Sequence: FASTA
                                  Gene Sequence: FASTA
                                  Name: Probable phospholipid-transporting ATPase IC
                                  Reactions:
                                    Gene Name: ATP8B1
                                    Uniprot ID: O43520 Link_out
                                    Protein Sequence: FASTA
                                    Gene Sequence: FASTA
                                    Name: Probable phospholipid-transporting ATPase IIA
                                    Reactions:
                                      Gene Name: ATP9A
                                      Uniprot ID: O75110 Link_out
                                      Protein Sequence: FASTA
                                      Gene Sequence: FASTA
                                      Name: Probable phospholipid-transporting ATPase VD
                                      Reactions:
                                        Gene Name: ATP10D
                                        Uniprot ID: Q9P241 Link_out
                                        Protein Sequence: FASTA
                                        Gene Sequence: FASTA
                                        Name: Probable phospholipid-transporting ATPase IB
                                        Reactions:
                                          Gene Name: ATP8A2
                                          Uniprot ID: Q9NTI2 Link_out
                                          Protein Sequence: FASTA
                                          Gene Sequence: FASTA
                                          Name: Probable phospholipid-transporting ATPase IA
                                          Reactions:
                                            Gene Name: ATP8A1
                                            Uniprot ID: Q9Y2Q0 Link_out
                                            Protein Sequence: FASTA
                                            Gene Sequence: FASTA
                                            Name: Probable phospholipid-transporting ATPase IM
                                            Reactions:
                                              Gene Name: ATP8B4
                                              Uniprot ID: Q8TF62 Link_out
                                              Protein Sequence: FASTA
                                              Gene Sequence: FASTA
                                              Name: Probable phospholipid-transporting ATPase IF
                                              Reactions:
                                                Gene Name: ATP11B
                                                Uniprot ID: Q9Y2G3 Link_out
                                                Protein Sequence: FASTA
                                                Gene Sequence: FASTA
                                                Name: Probable phospholipid-transporting ATPase IK
                                                Reactions:
                                                  Gene Name: ATP8B3
                                                  Uniprot ID: O60423 Link_out
                                                  Protein Sequence: FASTA
                                                  Gene Sequence: FASTA
                                                  Name: Phospholipid scramblase 1
                                                  Reactions:
                                                    Gene Name: PLSCR1
                                                    Uniprot ID: O15162 Link_out
                                                    Protein Sequence: FASTA
                                                    Gene Sequence: FASTA
                                                    Name: Phosphatidylserine decarboxylase proenzyme
                                                    Reactions:
                                                      Gene Name: PISD
                                                      Uniprot ID: Q9UG56 Link_out
                                                      Protein Sequence: FASTA
                                                      Gene Sequence: FASTA
                                                      Name: Phospholipid transfer protein
                                                      Reactions:
                                                        Gene Name: PLTP
                                                        Uniprot ID: P55058 Link_out
                                                        Protein Sequence: FASTA
                                                        Gene Sequence: FASTA
                                                        Name: Choline/ethanolaminephosphotransferase 1
                                                        Reactions:
                                                          Gene Name: CEPT1
                                                          Uniprot ID: Q9Y6K0 Link_out
                                                          Protein Sequence: FASTA
                                                          Gene Sequence: FASTA
                                                          Name: Phospholipase D3
                                                          Reactions:
                                                            Gene Name: PLD3
                                                            Uniprot ID: Q8IV08 Link_out
                                                            Protein Sequence: FASTA
                                                            Gene Sequence: FASTA
                                                            Name: Phospholipase D4
                                                            Reactions:
                                                              Gene Name: PLD4
                                                              Uniprot ID: Q96BZ4 Link_out
                                                              Protein Sequence: FASTA
                                                              Gene Sequence: FASTA
                                                              Name: Phospholipid scramblase 2
                                                              Reactions:
                                                                Gene Name: PLSCR2
                                                                Uniprot ID: Q9NRY7 Link_out
                                                                Protein Sequence: FASTA
                                                                Gene Sequence: FASTA
                                                                Name: Phospholipid scramblase 3
                                                                Reactions:
                                                                  Gene Name: PLSCR3
                                                                  Uniprot ID: Q9NRY6 Link_out
                                                                  Protein Sequence: FASTA
                                                                  Gene Sequence: FASTA
                                                                  Name: Phospholipid scramblase 4
                                                                  Reactions:
                                                                    Gene Name: PLSCR4
                                                                    Uniprot ID: Q9NRQ2 Link_out
                                                                    Protein Sequence: FASTA
                                                                    Gene Sequence: FASTA
                                                                    Name: Phospholipid scramblase family member 5
                                                                    Reactions:
                                                                      Gene Name: PLSCR5
                                                                      Uniprot ID: A0PG75 Link_out
                                                                      Protein Sequence: FASTA
                                                                      Gene Sequence: FASTA
                                                                      Name: Probable phospholipid-transporting ATPase VB
                                                                      Reactions:
                                                                        Gene Name: ATP10B
                                                                        Uniprot ID: O94823 Link_out
                                                                        Protein Sequence: FASTA
                                                                        Gene Sequence: FASTA
                                                                        Name: Probable phospholipid-transporting ATPase ID
                                                                        Reactions:
                                                                          Gene Name: ATP8B2
                                                                          Uniprot ID: P98198 Link_out
                                                                          Protein Sequence: FASTA
                                                                          Gene Sequence: FASTA
                                                                          Name: Abhydrolase domain-containing protein 4
                                                                          Reactions:
                                                                            Gene Name: ABHD4
                                                                            Uniprot ID: Q8TB40 Link_out
                                                                            Protein Sequence: FASTA
                                                                            Gene Sequence: FASTA
                                                                            Name: N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D
                                                                            Reactions:
                                                                              Gene Name: NAPEPLD
                                                                              Uniprot ID: Q6IQ20 Link_out
                                                                              Protein Sequence: FASTA
                                                                              Gene Sequence: FASTA
                                                                              Name: Phosphatidylethanolamine-binding protein 1
                                                                              Reactions:
                                                                                Gene Name: PEBP1
                                                                                Uniprot ID: P30086 Link_out
                                                                                Protein Sequence: FASTA
                                                                                Gene Sequence: FASTA
                                                                                Name: Phosphatidylethanolamine-binding protein 4
                                                                                Reactions:
                                                                                  Gene Name: PEBP4
                                                                                  Uniprot ID: Q96S96 Link_out
                                                                                  Protein Sequence: FASTA
                                                                                  Gene Sequence: FASTA
                                                                                  Name: Ethanolaminephosphotransferase 1
                                                                                  Reactions:
                                                                                    Gene Name: EPT1
                                                                                    Uniprot ID: Q9C0D9 Link_out
                                                                                    Protein Sequence: FASTA
                                                                                    Gene Sequence: FASTA
                                                                                    Name: Cytosolic phospholipase A2 beta
                                                                                    Reactions:
                                                                                      Gene Name: PLA2G4B
                                                                                      Uniprot ID: P0C869 Link_out
                                                                                      Protein Sequence: FASTA
                                                                                      Gene Sequence: FASTA
                                                                                      Name: Phospholipase D1 variant
                                                                                      Reactions:
                                                                                        Gene Name: Not Available
                                                                                        Uniprot ID: Q59EA4 Link_out
                                                                                        Protein Sequence: FASTA
                                                                                        Gene Sequence: FASTA