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Showing metabocard for PE(18:4(6Z,9Z,12Z,15Z)/P-18:1(11Z)) (HMDB09215)

Record Information
Version 3.5
Creation Date 2008-09-11 19:50:08 -0600
Update Date 2013-02-08 17:21:36 -0700
HMDB ID HMDB09215
Secondary Accession Numbers None
Metabolite Identification
Common Name PE(18:4(6Z,9Z,12Z,15Z)/P-18:1(11Z))
Description PE(18:4(6Z,9Z,12Z,15Z)/P-18:1(11Z)) is a phosphatidylethanolamine (PE or GPEtn). It is a glycerophospholipid in which a phosphorylethanolamine moiety occupies a glycerol substitution site. As is the case with diacylglycerols, glycerophosphoethanolamines can have many different combinations of fatty acids of varying lengths and saturation attached at the C-1 and C-2 positions. Fatty acids containing 16, 18 and 20 carbons are the most common. PE(18:4(6Z,9Z,12Z,15Z)/P-18:1(11Z)), in particular, consists of one chain of stearidonic acid at the C-1 position and one chain of plasmalogen 18:1n7 at the C-2 position. The stearidonic acid moiety is derived from seed oils, while the plasmalogen 18:1n7 moiety is derived from animal fats, liver and kidney. Phospholipids, are ubiquitous in nature and are key components of the lipid bilayer of cells, as well as being involved in metabolism and signaling. While most phospholipids have a saturated fatty acid on C-1 and an unsaturated fatty acid on C-2 of the glycerol backbone, the fatty acid distribution at the C-1 and C-2 positions of glycerol within phospholipids is continually in flux, owing to phospholipid degradation and the continuous phospholipid remodeling that occurs while these molecules are in membranes. PEs are neutral zwitterions at physiological pH. They mostly have palmitic or stearic acid on carbon 1 and a long chain unsaturated fatty acid (e.g. 18:2, 20:4 and 22:6) on carbon 2. PE synthesis can occur via two pathways. The first requires that ethanolamine be activated by phosphorylation and then coupled to CDP. The ethanolamine is then transferred from CDP-ethanolamine to phosphatidic acid to yield PE. The second involves the decarboxylation of PS. Plasmalogens are glycerol ether phospholipids. They are of two types, alkyl ether (-O-CH2-) and alkenyl ether (-O-CH=CH-). Dihydroxyacetone phosphate (DHAP) serves as the glycerol precursor for the synthesis of plasmalogens. Three major classes of plasmalogens have been identified: choline, ethanolamine and serine derivatives. Ethanolamine plasmalogen is prevalent in myelin. Choline plasmalogen is abundant in cardiac tissue. Usually, the highest proportion of the plasmalogen form is in the ethanolamine class with rather less in choline, and commonly little or none in other phospholipids such as phosphatidylinositol. In choline plasmalogens of most tissues, a higher proportion is often of the O-alkyl rather than the O-alkenyl form, but the reverse tends to be true in heart lipids. In animal tissues, the alkyl and alkenyl moieties in both non-polar and phospholipids tend to be rather simple in composition with 16:0, 18:0 and 18:1 (double bond in position 9) predominating. Ether analogues of triacylglycerols, i.e. 1-alkyldiacyl-sn-glycerols, are present at trace levels only if at all in most animal tissues, but they can be major components of some marine lipids.
Structure Thumb
Download: MOL | SDF | SMILES | InChI
Display: 2D Structure | 3D Structure
Synonyms
  1. 1-Stearidonoyl-2-(1-enyl-vaccenoyl)-sn-glycero-3-phosphoethanolamine
  2. GPEtn(18:4/18:1)
  3. GPEtn(18:4n3/18:1n7)
  4. GPEtn(18:4w3/18:1w7)
  5. GPEtn(36:5)
  6. PE(18:4/18:1)
  7. PE(18:4n3/18:1n7)
  8. PE(18:4w3/18:1w7)
  9. PE(36:5)
  10. Phophatidylethanolamine(18:4/18:1)
  11. Phophatidylethanolamine(18:4n3/18:1n7)
  12. Phophatidylethanolamine(18:4w3/18:1w7)
  13. Phophatidylethanolamine(36:5)
Chemical Formula C41H72NO7P
Average Molecular Weight 721.9866
Monoisotopic Molecular Weight 721.504640175
IUPAC Name (2-aminoethoxy)[(2R)-2-[(1Z,11Z)-octadeca-1,11-dien-1-yloxy]-3-[(6Z,9Z,12Z,15Z)-octadeca-6,9,12,15-tetraenoyloxy]propoxy]phosphinic acid
Traditional IUPAC Name 2-aminoethoxy(2R)-2-[(1Z,11Z)-octadeca-1,11-dien-1-yloxy]-3-[(6Z,9Z,12Z,15Z)-octadeca-6,9,12,15-tetraenoyloxy]propoxyphosphinic acid
CAS Registry Number Not Available
SMILES [H][C@@](COC(=O)CCCC\C=C/C\C=C/C\C=C/C\C=C/CC)(COP(O)(=O)OCCN)O\C=C/CCCCCCCC\C=C/CCCCCC
InChI Identifier InChI=1S/C41H72NO7P/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-31-33-36-46-40(39-49-50(44,45)48-37-35-42)38-47-41(43)34-32-30-28-26-24-22-20-18-16-14-12-10-8-6-4-2/h6,8,12-15,18,20,24,26,33,36,40H,3-5,7,9-11,16-17,19,21-23,25,27-32,34-35,37-39,42H2,1-2H3,(H,44,45)/b8-6-,14-12-,15-13-,20-18-,26-24-,36-33-/t40-/m1/s1
InChI Key ZKHZGLULXDLLMK-KQNMAQKCSA-N
Chemical Taxonomy
Kingdom Organic Compounds
Super Class Organophosphorus Compounds
Class Organic Phosphoric Acids and Derivatives
Sub Class Organophosphate Esters
Other Descriptors
  • Aliphatic Acyclic Compounds
Substituents
  • Acyclic Alkene
  • Carboxylic Acid Ester
  • Enol Ether
  • Fatty Acid Ester
  • Organic Hypophosphite
  • Organic Phosphite
  • Primary Aliphatic Amine (Alkylamine)
Direct Parent Phosphoethanolamines
Ontology
Status Expected and Not Quantified
Origin
  • Endogenous
  • Food
Biofunction
  • Cell signaling
  • Energy source
  • Fuel and energy storage
  • Fuel or energy source
  • Membrane component
  • Membrane integrity/stability
Application
  • Nutrients
  • Stabilizers
  • Surfactants and Emulsifiers
Cellular locations
  • Extracellular
  • Membrane
Physical Properties
State Solid
Experimental Properties
Property Value Reference
Melting Point Not Available Not Available
Boiling Point Not Available Not Available
Water Solubility Not Available Not Available
LogP Not Available Not Available
Predicted Properties
Property Value Source
Water Solubility 8.200E-05 g/L ALOGPS
LogP 8.85 ALOGPS
LogP 10.81 ChemAxon
LogS -6.94 ALOGPS
pKa (strongest acidic) 1.87 ChemAxon
pKa (strongest basic) 10 ChemAxon
Hydrogen Acceptor Count 5 ChemAxon
Hydrogen Donor Count 2 ChemAxon
Polar Surface Area 117.31 A2 ChemAxon
Rotatable Bond Count 37 ChemAxon
Refractivity 215.33 ChemAxon
Polarizability 86.25 ChemAxon
Formal Charge 0 ChemAxon
Physiological Charge 0 ChemAxon
Spectra
Not Available
Biological Properties
Cellular Locations
  • Extracellular
  • Membrane
Biofluid Locations Not Available
Tissue Location
  • All Tissues
  • Brain
Pathways Not Available
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease References None
Associated OMIM IDs None
DrugBank ID Not Available
Phenol Explorer Compound ID Not Available
Phenol Explorer Metabolite ID Not Available
FoodDB ID FDB026405
KNApSAcK ID Not Available
Chemspider ID 24768677 Link_out
KEGG Compound ID C00350 Link_out
BioCyc ID L-1-PHOSPHATIDYL-ETHANOLAMINE Link_out
BiGG ID Not Available
Wikipedia Link Lecithin Link_out
NuGOwiki Link HMDB09215 Link_out
Metagene Link HMDB09215 Link_out
METLIN ID Not Available
PubChem Compound 53479707 Link_out
PDB ID Not Available
ChEBI ID Not Available
References
Synthesis Reference Not Available
Material Safety Data Sheet (MSDS) Not Available
General References Not Available

Enzymes
Name: Calcium-dependent phospholipase A2
Reactions:
  • phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [RN:R01313]
Gene Name: PLA2G5
Uniprot ID: P39877 Link_out
Protein Sequence: FASTA
Gene Sequence: FASTA
Name: Group IIF secretory phospholipase A2
Reactions:
  • phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [RN:R01313]
Gene Name: PLA2G2F
Uniprot ID: Q9BZM2 Link_out
Protein Sequence: FASTA
Gene Sequence: FASTA
Name: Cytosolic phospholipase A2
Reactions:
  • 2-lysophosphatidylcholine + H2O = glycerophosphocholine + a carboxylate [RN:R07291]
Gene Name: PLA2G4A
Uniprot ID: P47712 Link_out
Protein Sequence: FASTA
Gene Sequence: FASTA
Name: Phospholipase A2
Reactions:
  • phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [RN:R01313]
Gene Name: PLA2G1B
Uniprot ID: P04054 Link_out
Protein Sequence: FASTA
Gene Sequence: FASTA
Name: Group XIIB secretory phospholipase A2-like protein
Reactions:
    Gene Name: PLA2G12B
    Uniprot ID: Q9BX93 Link_out
    Protein Sequence: FASTA
    Gene Sequence: FASTA
    Name: Group 10 secretory phospholipase A2
    Reactions:
    • phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [RN:R01313]
    Gene Name: PLA2G10
    Uniprot ID: O15496 Link_out
    Protein Sequence: FASTA
    Gene Sequence: FASTA
    Name: Group IIE secretory phospholipase A2
    Reactions:
    • phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [RN:R01313]
    Gene Name: PLA2G2E
    Uniprot ID: Q9NZK7 Link_out
    Protein Sequence: FASTA
    Gene Sequence: FASTA
    Name: 85 kDa calcium-independent phospholipase A2
    Reactions:
    • phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [RN:R01313]
    Gene Name: PLA2G6
    Uniprot ID: O60733 Link_out
    Protein Sequence: FASTA
    Gene Sequence: FASTA
    Name: Group IID secretory phospholipase A2
    Reactions:
    • phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [RN:R01313]
    Gene Name: PLA2G2D
    Uniprot ID: Q9UNK4 Link_out
    Protein Sequence: FASTA
    Gene Sequence: FASTA
    Name: Phospholipase D2
    Reactions:
    • a phosphatidylcholine + H2O = choline + a phosphatidate [RN:R01310]
    Gene Name: PLD2
    Uniprot ID: O14939 Link_out
    Protein Sequence: FASTA
    Gene Sequence: FASTA
    Name: Phosphatidylethanolamine N-methyltransferase
    Reactions:
    • S-adenosyl-L-methionine + phosphatidylethanolamine = S-adenosyl-L-homocysteine + phosphatidyl-N-methylethanolamine [RN:R02056]
    Gene Name: PEMT
    Uniprot ID: Q9UBM1 Link_out
    Protein Sequence: FASTA
    Gene Sequence: FASTA
    Name: Phospholipase D1
    Reactions:
    • a phosphatidylcholine + H2O = choline + a phosphatidate [RN:R01310]
    Gene Name: PLD1
    Uniprot ID: Q13393 Link_out
    Protein Sequence: FASTA
    Gene Sequence: FASTA
    Name: Group 3 secretory phospholipase A2
    Reactions:
    • phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [RN:R01313]
    Gene Name: PLA2G3
    Uniprot ID: Q9NZ20 Link_out
    Protein Sequence: FASTA
    Gene Sequence: FASTA
    Name: Probable phospholipid-transporting ATPase IG
    Reactions:
    • ATP + H2O + phospholipidin = ADP + phosphate + phospholipidout [RN:R00086]
    Gene Name: ATP11C
    Uniprot ID: Q8NB49 Link_out
    Protein Sequence: FASTA
    Gene Sequence: FASTA
    Name: Probable phospholipid-transporting ATPase IH
    Reactions:
    • ATP + H2O + phospholipidin = ADP + phosphate + phospholipidout [RN:R00086]
    Gene Name: ATP11A
    Uniprot ID: P98196 Link_out
    Protein Sequence: FASTA
    Gene Sequence: FASTA
    Name: Probable phospholipid-transporting ATPase VA
    Reactions:
    • ATP + H2O + phospholipidin = ADP + phosphate + phospholipidout [RN:R00086]
    Gene Name: ATP10A
    Uniprot ID: O60312 Link_out
    Protein Sequence: FASTA
    Gene Sequence: FASTA
    Name: Probable phospholipid-transporting ATPase IC
    Reactions:
    • ATP + H2O + phospholipidin = ADP + phosphate + phospholipidout [RN:R00086]
    Gene Name: ATP8B1
    Uniprot ID: O43520 Link_out
    Protein Sequence: FASTA
    Gene Sequence: FASTA
    Name: Probable phospholipid-transporting ATPase IIA
    Reactions:
    • ATP + H2O + phospholipidin = ADP + phosphate + phospholipidout [RN:R00086]
    Gene Name: ATP9A
    Uniprot ID: O75110 Link_out
    Protein Sequence: FASTA
    Gene Sequence: FASTA
    Name: Probable phospholipid-transporting ATPase VD
    Reactions:
    • ATP + H2O + phospholipidin = ADP + phosphate + phospholipidout [RN:R00086]
    Gene Name: ATP10D
    Uniprot ID: Q9P241 Link_out
    Protein Sequence: FASTA
    Gene Sequence: FASTA
    Name: Probable phospholipid-transporting ATPase IB
    Reactions:
    • ATP + H2O + phospholipidin = ADP + phosphate + phospholipidout [RN:R00086]
    Gene Name: ATP8A2
    Uniprot ID: Q9NTI2 Link_out
    Protein Sequence: FASTA
    Gene Sequence: FASTA
    Name: Probable phospholipid-transporting ATPase IA
    Reactions:
    • ATP + H2O + phospholipidin = ADP + phosphate + phospholipidout [RN:R00086]
    Gene Name: ATP8A1
    Uniprot ID: Q9Y2Q0 Link_out
    Protein Sequence: FASTA
    Gene Sequence: FASTA
    Name: Probable phospholipid-transporting ATPase IM
    Reactions:
    • ATP + H2O + phospholipidin = ADP + phosphate + phospholipidout [RN:R00086]
    Gene Name: ATP8B4
    Uniprot ID: Q8TF62 Link_out
    Protein Sequence: FASTA
    Gene Sequence: FASTA
    Name: Probable phospholipid-transporting ATPase IF
    Reactions:
    • ATP + H2O + phospholipidin = ADP + phosphate + phospholipidout [RN:R00086]
    Gene Name: ATP11B
    Uniprot ID: Q9Y2G3 Link_out
    Protein Sequence: FASTA
    Gene Sequence: FASTA
    Name: Probable phospholipid-transporting ATPase IK
    Reactions:
    • ATP + H2O + phospholipidin = ADP + phosphate + phospholipidout [RN:R00086]
    Gene Name: ATP8B3
    Uniprot ID: O60423 Link_out
    Protein Sequence: FASTA
    Gene Sequence: FASTA
    Name: Phospholipid scramblase 1
    Reactions:
      Gene Name: PLSCR1
      Uniprot ID: O15162 Link_out
      Protein Sequence: FASTA
      Gene Sequence: FASTA
      Name: Phosphatidylserine decarboxylase proenzyme
      Reactions:
      • phosphatidyl-L-serine = phosphatidylethanolamine + CO2 [RN:R02055]
      Gene Name: PISD
      Uniprot ID: Q9UG56 Link_out
      Protein Sequence: FASTA
      Gene Sequence: FASTA
      Name: Phospholipid transfer protein
      Reactions:
        Gene Name: PLTP
        Uniprot ID: P55058 Link_out
        Protein Sequence: FASTA
        Gene Sequence: FASTA
        Name: Choline/ethanolaminephosphotransferase 1
        Reactions:
        • CDP-choline + 1,2-diacyl-sn-glycerol = CMP + a phosphatidylcholine [RN:R01321]
        Gene Name: CEPT1
        Uniprot ID: Q9Y6K0 Link_out
        Protein Sequence: FASTA
        Gene Sequence: FASTA
        Name: Phospholipase D3
        Reactions:
        • a phosphatidylcholine + H2O = choline + a phosphatidate [RN:R01310]
        Gene Name: PLD3
        Uniprot ID: Q8IV08 Link_out
        Protein Sequence: FASTA
        Gene Sequence: FASTA
        Name: Phospholipase D4
        Reactions:
        • a phosphatidylcholine + H2O = choline + a phosphatidate [RN:R01310]
        Gene Name: PLD4
        Uniprot ID: Q96BZ4 Link_out
        Protein Sequence: FASTA
        Gene Sequence: FASTA
        Name: Phospholipid scramblase 2
        Reactions:
          Gene Name: PLSCR2
          Uniprot ID: Q9NRY7 Link_out
          Protein Sequence: FASTA
          Gene Sequence: FASTA
          Name: Phospholipid scramblase 3
          Reactions:
            Gene Name: PLSCR3
            Uniprot ID: Q9NRY6 Link_out
            Protein Sequence: FASTA
            Gene Sequence: FASTA
            Name: Phospholipid scramblase 4
            Reactions:
              Gene Name: PLSCR4
              Uniprot ID: Q9NRQ2 Link_out
              Protein Sequence: FASTA
              Gene Sequence: FASTA
              Name: Phospholipid scramblase family member 5
              Reactions:
                Gene Name: PLSCR5
                Uniprot ID: A0PG75 Link_out
                Protein Sequence: FASTA
                Gene Sequence: FASTA
                Name: Probable phospholipid-transporting ATPase VB
                Reactions:
                • ATP + H2O + phospholipidin = ADP + phosphate + phospholipidout [RN:R00086]
                Gene Name: ATP10B
                Uniprot ID: O94823 Link_out
                Protein Sequence: FASTA
                Gene Sequence: FASTA
                Name: Probable phospholipid-transporting ATPase ID
                Reactions:
                • ATP + H2O + phospholipidin = ADP + phosphate + phospholipidout [RN:R00086]
                Gene Name: ATP8B2
                Uniprot ID: P98198 Link_out
                Protein Sequence: FASTA
                Gene Sequence: FASTA
                Name: Abhydrolase domain-containing protein 4
                Reactions:
                  Gene Name: ABHD4
                  Uniprot ID: Q8TB40 Link_out
                  Protein Sequence: FASTA
                  Gene Sequence: FASTA
                  Name: N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D
                  Reactions:
                    Gene Name: NAPEPLD
                    Uniprot ID: Q6IQ20 Link_out
                    Protein Sequence: FASTA
                    Gene Sequence: FASTA
                    Name: Phosphatidylethanolamine-binding protein 1
                    Reactions:
                      Gene Name: PEBP1
                      Uniprot ID: P30086 Link_out
                      Protein Sequence: FASTA
                      Gene Sequence: FASTA
                      Name: Phosphatidylethanolamine-binding protein 4
                      Reactions:
                        Gene Name: PEBP4
                        Uniprot ID: Q96S96 Link_out
                        Protein Sequence: FASTA
                        Gene Sequence: FASTA
                        Name: Ethanolaminephosphotransferase 1
                        Reactions:
                        • CDP-ethanolamine + 1,2-diacyl-sn-glycerol = CMP + a phosphatidylethanolamine [RN:R02057]
                        Gene Name: EPT1
                        Uniprot ID: Q9C0D9 Link_out
                        Protein Sequence: FASTA
                        Gene Sequence: FASTA
                        Name: Cytosolic phospholipase A2 beta
                        Reactions:
                        • phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [RN:R01313]
                        Gene Name: PLA2G4B
                        Uniprot ID: P0C869 Link_out
                        Protein Sequence: FASTA
                        Gene Sequence: FASTA
                        Name: Phospholipase D1 variant
                        Reactions:
                          Gene Name: Not Available
                          Uniprot ID: Q59EA4 Link_out
                          Protein Sequence: FASTA
                          Gene Sequence: FASTA