Hmp_logo

Human Metabolome Database Version 3.5

HMDB has recently undergone some major changes, if you are experiencing problems please click here to provide us with feedback.

Showing metabocard for LPA(P-16:0e/0:0) (HMDB11154)

Record Information
Version 3.5
Creation Date 2008-10-29 08:53:30 -0600
Update Date 2013-02-08 17:25:47 -0700
HMDB ID HMDB11154
Secondary Accession Numbers None
Metabolite Identification
Common Name LPA(P-16:0e/0:0)
Description 1-(1Z-hexadecenyl)-sn-glycero-3-phosphate is an intermediate of ether lipid metabolism. Ether lipids are lipids in which one or more of the carbon atoms on glycerol is bonded to an alkyl chain via an ether linkage, as opposed to the usual ester linkage. 1-(1Z-hexadecenyl)-sn-glycero-3-phosphate is irreversibly produced from 1-(1Z-hexadecenyl)-sn-glycero-3-phosphoethanolamine via the enzyme alkylglycerophosphoethanolamine phosphodiesterase (EC: 3.1.4.39). Plasmalogens are glycerol ether phospholipids. They are of two types, alkyl ether (-O-CH2-) and alkenyl ether (-O-CH=CH-). Dihydroxyacetone phosphate (DHAP) serves as the glycerol precursor for the synthesis of plasmalogens. Three major classes of plasmalogens have been identified: choline, ethanolamine and serine derivatives. Ethanolamine plasmalogen is prevalent in myelin. Choline plasmalogen is abundant in cardiac tissue. Usually, the highest proportion of the plasmalogen form is in the ethanolamine class with rather less in choline, and commonly little or none in other phospholipids such as phosphatidylinositol. In choline plasmalogens of most tissues, a higher proportion is often of the O-alkyl rather than the O-alkenyl form, but the reverse tends to be true in heart lipids. In animal tissues, the alkyl and alkenyl moieties in both non-polar and phospholipids tend to be rather simple in composition with 16:0, 18:0 and 18:1 (double bond in position 9) predominating. Ether analogues of triacylglycerols, i.e. 1-alkyldiacyl-sn-glycerols, are present at trace levels only if at all in most animal tissues, but they can be major components of some marine lipids.
Structure Thumb
Download: MOL | SDF | SMILES | InChI
Display: 2D Structure | 3D Structure
Synonyms
  1. 1-(1Z-Hexadecenyl)-sn-glycero-3-phosphate
  2. LysoPA(dm16:0e)
Chemical Formula C19H39O6P
Average Molecular Weight 394.4831
Monoisotopic Molecular Weight 394.248425492
IUPAC Name [(2R)-3-[(1Z)-hexadec-1-en-1-yloxy]-2-hydroxypropoxy]phosphonic acid
Traditional IUPAC Name (2R)-3-[(1Z)-hexadec-1-en-1-yloxy]-2-hydroxypropoxyphosphonic acid
CAS Registry Number Not Available
SMILES CCCCCCCCCCCCCC\C=C/OC[C@](O)([H])COP(=O)(O)O
InChI Identifier InChI=1S/C19H39O6P/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-24-17-19(20)18-25-26(21,22)23/h15-16,19-20H,2-14,17-18H2,1H3,(H2,21,22,23)/b16-15-/t19-/m1/s1
InChI Key LBGSRVIXIVDRQM-OAXWQBPPSA-N
Chemical Taxonomy
Kingdom Organic Compounds
Super Class Organophosphorus Compounds
Class Organic Phosphoric Acids and Derivatives
Sub Class Organophosphate Esters
Other Descriptors
  • Aliphatic Acyclic Compounds
Substituents
  • Enol Ether
  • Organic Hypophosphite
  • Organic Phosphite
  • Secondary Alcohol
Direct Parent Organophosphate Esters
Ontology
Status Expected and Not Quantified
Origin
  • Endogenous
Biofunction Not Available
Application Not Available
Cellular locations Not Available
Physical Properties
State Solid
Experimental Properties
Property Value Reference
Melting Point Not Available Not Available
Boiling Point Not Available Not Available
Water Solubility Not Available Not Available
LogP Not Available Not Available
Predicted Properties
Property Value Source
Water Solubility 0.0033 g/L ALOGPS
LogP 4.81 ALOGPS
LogP 5.35 ChemAxon
LogS -5.08 ALOGPS
pKa (strongest acidic) 1.51 ChemAxon
pKa (strongest basic) -3.4 ChemAxon
Hydrogen Acceptor Count 5 ChemAxon
Hydrogen Donor Count 3 ChemAxon
Polar Surface Area 96.22 A2 ChemAxon
Rotatable Bond Count 19 ChemAxon
Refractivity 105.32 ChemAxon
Polarizability 45.38 ChemAxon
Formal Charge 0 ChemAxon
Physiological Charge -2 ChemAxon
Spectra
Not Available
Biological Properties
Cellular Locations Not Available
Biofluid Locations Not Available
Tissue Location Not Available
Pathways Not Available
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease References None
Associated OMIM IDs None
DrugBank ID Not Available
Phenol Explorer Compound ID Not Available
Phenol Explorer Metabolite ID Not Available
FoodDB ID FDB027929
KNApSAcK ID Not Available
Chemspider ID 24766520 Link_out
KEGG Compound ID C15646 Link_out
BioCyc ID Not Available
BiGG ID Not Available
Wikipedia Link Not Available
NuGOwiki Link HMDB11154 Link_out
Metagene Link HMDB11154 Link_out
METLIN ID Not Available
PubChem Compound 52929772 Link_out
PDB ID Not Available
ChEBI ID Not Available
References
Synthesis Reference Not Available
Material Safety Data Sheet (MSDS) Not Available
General References Not Available

Enzymes
Name: Ectonucleotide pyrophosphatase/phosphodiesterase family member 2
Reactions:
  • 1-alkyl-sn-glycero-3-phosphoethanolamine + H2O = 1-alkyl-sn-glycerol 3-phosphate + ethanolamine [RN:R04362]
Gene Name: ENPP2
Uniprot ID: Q13822 Link_out
Protein Sequence: FASTA
Gene Sequence: FASTA
Name: Lipid phosphate phosphohydrolase 2
Reactions:
  • a 1,2-diacylglycerol 3-phosphate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [RN:R02239]
Gene Name: PPAP2C
Uniprot ID: O43688 Link_out
Protein Sequence: FASTA
Gene Sequence: FASTA
Name: Lipid phosphate phosphohydrolase 1
Reactions:
  • a 1,2-diacylglycerol 3-phosphate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [RN:R02239]
Gene Name: PPAP2A
Uniprot ID: O14494 Link_out
Protein Sequence: FASTA
Gene Sequence: FASTA
Name: Lipid phosphate phosphohydrolase 3
Reactions:
  • a 1,2-diacylglycerol 3-phosphate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [RN:R02239]
Gene Name: PPAP2B
Uniprot ID: O14495 Link_out
Protein Sequence: FASTA
Gene Sequence: FASTA
Name: Acyl-CoA:lysophosphatidylglycerol acyltransferase 1
Reactions:
    Gene Name: LPGAT1
    Uniprot ID: Q92604 Link_out
    Protein Sequence: FASTA
    Gene Sequence: FASTA
    Name: Focal adhesion kinase 1
    Reactions:
    • ATP + a [protein]-L-tyrosine = ADP + a [protein]-L-tyrosine phosphate [RN:R02584]
    Gene Name: PTK2
    Uniprot ID: Q05397 Link_out
    Protein Sequence: FASTA
    Gene Sequence: FASTA
    Name: Protein-tyrosine kinase 2-beta
    Reactions:
    • ATP + a [protein]-L-tyrosine = ADP + a [protein]-L-tyrosine phosphate [RN:R02584]
    Gene Name: PTK2B
    Uniprot ID: Q14289 Link_out
    Protein Sequence: FASTA
    Gene Sequence: FASTA
    Name: 1-acyl-sn-glycerol-3-phosphate acyltransferase gamma
    Reactions:
    • acyl-CoA + 1-acyl-sn-glycerol 3-phosphate = CoA + 1,2-diacyl-sn-glycerol 3-phosphate [RN:R02241]
    Gene Name: AGPAT3
    Uniprot ID: Q9NRZ7 Link_out
    Protein Sequence: FASTA
    Gene Sequence: FASTA
    Name: 1-acyl-sn-glycerol-3-phosphate acyltransferase beta
    Reactions:
    • acyl-CoA + 1-acyl-sn-glycerol 3-phosphate = CoA + 1,2-diacyl-sn-glycerol 3-phosphate [RN:R02241]
    Gene Name: AGPAT2
    Uniprot ID: O15120 Link_out
    Protein Sequence: FASTA
    Gene Sequence: FASTA
    Name: 1-acyl-sn-glycerol-3-phosphate acyltransferase alpha
    Reactions:
    • acyl-CoA + 1-acyl-sn-glycerol 3-phosphate = CoA + 1,2-diacyl-sn-glycerol 3-phosphate [RN:R02241]
    Gene Name: AGPAT1
    Uniprot ID: Q99943 Link_out
    Protein Sequence: FASTA
    Gene Sequence: FASTA
    Name: Lysophosphatidic acid receptor 2
    Reactions:
      Gene Name: LPAR2
      Uniprot ID: Q9HBW0 Link_out
      Protein Sequence: FASTA
      Gene Sequence: FASTA
      Name: Lysophosphatidic acid receptor 1
      Reactions:
        Gene Name: LPAR1
        Uniprot ID: Q92633 Link_out
        Protein Sequence: FASTA
        Gene Sequence: FASTA
        Name: 1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon
        Reactions:
        • acyl-CoA + 1-acyl-sn-glycerol 3-phosphate = CoA + 1,2-diacyl-sn-glycerol 3-phosphate [RN:R02241]
        Gene Name: AGPAT5
        Uniprot ID: Q9NUQ2 Link_out
        Protein Sequence: FASTA
        Gene Sequence: FASTA
        Name: Glycerol-3-phosphate acyltransferase 4
        Reactions:
        • acyl-CoA + sn-glycerol 3-phosphate = CoA + 1-acyl-sn-glycerol 3-phosphate [RN:R00851]
        Gene Name: AGPAT6
        Uniprot ID: Q86UL3 Link_out
        Protein Sequence: FASTA
        Gene Sequence: FASTA
        Name: 1-acyl-sn-glycerol-3-phosphate acyltransferase delta
        Reactions:
        • acyl-CoA + 1-acyl-sn-glycerol 3-phosphate = CoA + 1,2-diacyl-sn-glycerol 3-phosphate [RN:R02241]
        Gene Name: AGPAT4
        Uniprot ID: Q9NRZ5 Link_out
        Protein Sequence: FASTA
        Gene Sequence: FASTA
        Name: Lysophosphatidylcholine acyltransferase 1
        Reactions:
        • acetyl-CoA + 1-alkyl-sn-glycero-3-phosphocholine = CoA + 2-acetyl-1-alkyl-sn-glycero-3-phosphocholine [RN:R03437]
        Gene Name: LPCAT1
        Uniprot ID: Q8NF37 Link_out
        Protein Sequence: FASTA
        Gene Sequence: FASTA
        Name: Lysophosphatidylcholine acyltransferase 2
        Reactions:
        • acetyl-CoA + 1-alkyl-sn-glycero-3-phosphocholine = CoA + 2-acetyl-1-alkyl-sn-glycero-3-phosphocholine [RN:R03437]
        Gene Name: LPCAT2
        Uniprot ID: Q7L5N7 Link_out
        Protein Sequence: FASTA
        Gene Sequence: FASTA
        Name: Lysocardiolipin acyltransferase 1
        Reactions:
        • acyl-CoA + 1-acyl-sn-glycerol 3-phosphate = CoA + 1,2-diacyl-sn-glycerol 3-phosphate [RN:R02241]
        Gene Name: LCLAT1
        Uniprot ID: Q6UWP7 Link_out
        Protein Sequence: FASTA
        Gene Sequence: FASTA
        Name: Lysophosphatidic acid receptor 3
        Reactions:
          Gene Name: LPAR3
          Uniprot ID: Q9UBY5 Link_out
          Protein Sequence: FASTA
          Gene Sequence: FASTA
          Name: Lysophosphatidic acid receptor 4
          Reactions:
            Gene Name: LPAR4
            Uniprot ID: Q99677 Link_out
            Protein Sequence: FASTA
            Gene Sequence: FASTA
            Name: Lysophosphatidic acid receptor 5
            Reactions:
              Gene Name: LPAR5
              Uniprot ID: Q9H1C0 Link_out
              Protein Sequence: FASTA
              Gene Sequence: FASTA
              Name: Lysophospholipid acyltransferase LPCAT4
              Reactions:
                Gene Name: LPCAT4
                Uniprot ID: Q643R3 Link_out
                Protein Sequence: FASTA
                Gene Sequence: FASTA
                Name: Glycerol-3-phosphate acyltransferase 3
                Reactions:
                • acyl-CoA + sn-glycerol 3-phosphate = CoA + 1-acyl-sn-glycerol 3-phosphate [RN:R00851]
                Gene Name: AGPAT9
                Uniprot ID: Q53EU6 Link_out
                Protein Sequence: FASTA
                Gene Sequence: FASTA
                Name: Lysophosphatidic acid phosphatase type 6
                Reactions:
                • a phosphate monoester + H2O = an alcohol + phosphate [RN:R00626]
                Gene Name: ACP6
                Uniprot ID: Q9NPH0 Link_out
                Protein Sequence: FASTA
                Gene Sequence: FASTA
                Name: Lysophosphatidic acid receptor 6
                Reactions:
                  Gene Name: LPAR6
                  Uniprot ID: P43657 Link_out
                  Protein Sequence: FASTA
                  Gene Sequence: FASTA
                  Name: Lipase member H
                  Reactions:
                    Gene Name: LIPH
                    Uniprot ID: Q8WWY8 Link_out
                    Protein Sequence: FASTA
                    Gene Sequence: FASTA
                    Name: Lipase member I
                    Reactions:
                      Gene Name: LIPI
                      Uniprot ID: Q6XZB0 Link_out
                      Protein Sequence: FASTA
                      Gene Sequence: FASTA
                      Name: Lipid phosphate phosphatase-related protein type 4
                      Reactions:
                      • a 1,2-diacylglycerol 3-phosphate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [RN:R02239]
                      Gene Name: LPPR4
                      Uniprot ID: Q7Z2D5 Link_out
                      Protein Sequence: FASTA
                      Gene Sequence: FASTA
                      Name: Acylglycerol kinase, mitochondrial
                      Reactions:
                      • ATP + 1,2-diacyl-sn-glycerol = ADP + 1,2-diacyl-sn-glycerol 3-phosphate [RN:R02240]
                      Gene Name: AGK
                      Uniprot ID: Q53H12 Link_out
                      Protein Sequence: FASTA
                      Gene Sequence: FASTA
                      Name: Lysophosphatidic acid receptor 1
                      Reactions:
                        Gene Name: LPAR1
                        Uniprot ID: B1AP63 Link_out
                        Protein Sequence: FASTA
                        Gene Sequence: FASTA
                        Name: High-affinity lysophosphatidic acid receptor homolog
                        Reactions:
                          Gene Name: Not Available
                          Uniprot ID: O43898 Link_out
                          Protein Sequence: FASTA
                          Gene Sequence: FASTA
                          Name: LPAR1 protein
                          Reactions:
                            Gene Name: LPAR1
                            Uniprot ID: Q6GPG7 Link_out
                            Protein Sequence: FASTA
                            Gene Sequence: FASTA