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Human Metabolome Database Version 3.5

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Showing metabocard for PE(P-18:1(11Z)/20:5(5Z,8Z,11Z,14Z,17Z)) (HMDB11420)

Record Information
Version 3.5
Creation Date 2008-12-09 19:09:11 -0700
Update Date 2013-05-24 14:27:37 -0600
HMDB ID HMDB11420
Secondary Accession Numbers None
Metabolite Identification
Common Name PE(P-18:1(11Z)/20:5(5Z,8Z,11Z,14Z,17Z))
Description Phosphatidylethanolamines (cephalin, sometimes abbreviated PE) are a class of phospholipids found in biological membranes. They are synthesized by the addition of CDP-ethanolamine to diglycerides, releasing CMP. S-Adenosyl methionine can subsequently methylate the amine of phosphatidylethanolamines to yield phosphatidylcholines (Wikipedia). Cephalin is a phospholipid, which is a lipid derivative. It is not to be confused with the molecule of the same name that is an alkaloid constituent of Ipecac. While most phospholipids have a saturated fatty acid on C-1 and an unsaturated fatty acid on C-2 of the glycerol backbone, the fatty acid distribution at the C-1 and C-2 positions of glycerol within phospholipids is continually in flux, owing to phospholipid degradation and the continuous phospholipid remodeling that occurs while these molecules are in membranes. PEs are neutral zwitterions at physiological pH. They mostly have palmitic or stearic acid on carbon 1 and a long chain unsaturated fatty acid (e.g. 18:2, 20:4 and 22:6) on carbon 2. PE synthesis can occur via two pathways. The first requires that ethanolamine be activated by phosphorylation and then coupled to CDP. The ethanolamine is then transferred from CDP-ethanolamine to phosphatidic acid to yield PE. The second involves the decarboxylation of PS. Plasmalogens are glycerol ether phospholipids. They are of two types, alkyl ether (-O-CH2-) and alkenyl ether (-O-CH=CH-). Dihydroxyacetone phosphate (DHAP) serves as the glycerol precursor for the synthesis of plasmalogens. Three major classes of plasmalogens have been identified: choline, ethanolamine and serine derivatives. Ethanolamine plasmalogen is prevalent in myelin. Choline plasmalogen is abundant in cardiac tissue. Usually, the highest proportion of the plasmalogen form is in the ethanolamine class with rather less in choline, and commonly little or none in other phospholipids such as phosphatidylinositol. In choline plasmalogens of most tissues, a higher proportion is often of the O-alkyl rather than the O-alkenyl form, but the reverse tends to be true in heart lipids. In animal tissues, the alkyl and alkenyl moieties in both non-polar and phospholipids tend to be rather simple in composition with 16:0, 18:0 and 18:1 (double bond in position 9) predominating. Ether analogues of triacylglycerols, i.e. 1-alkyldiacyl-sn-glycerols, are present at trace levels only if at all in most animal tissues, but they can be major components of some marine lipids.
Structure Thumb
Download: MOL | SDF | SMILES | InChI
Display: 2D Structure | 3D Structure
Synonyms
  1. Phosphatidylethanolamine(dm18:1(11Z)/20:5(5Z,8Z,11Z,14Z,17Z))
Chemical Formula C43H74NO7P
Average Molecular Weight 748.0239
Monoisotopic Molecular Weight 747.520290239
IUPAC Name (2-aminoethoxy)[(2R)-2-[(5Z,8Z,11Z,14Z,17Z)-icosa-5,8,11,14,17-pentaenoyloxy]-3-[(1Z,11Z)-octadeca-1,11-dien-1-yloxy]propoxy]phosphinic acid
Traditional IUPAC Name 2-aminoethoxy(2R)-2-[(5Z,8Z,11Z,14Z,17Z)-icosa-5,8,11,14,17-pentaenoyloxy]-3-[(1Z,11Z)-octadeca-1,11-dien-1-yloxy]propoxyphosphinic acid
CAS Registry Number Not Available
SMILES [H][C@@](CO\C=C/CCCCCCCC\C=C/CCCCCC)(COP(O)(=O)OCCN)OC(=O)CCC\C=C/C\C=C/C\C=C/C\C=C/C\C=C/CC
InChI Identifier InChI=1S/C43H74NO7P/c1-3-5-7-9-11-13-15-17-19-21-22-24-26-28-30-32-34-36-43(45)51-42(41-50-52(46,47)49-39-37-44)40-48-38-35-33-31-29-27-25-23-20-18-16-14-12-10-8-6-4-2/h5,7,11,13-14,16-17,19,22,24,28,30,35,38,42H,3-4,6,8-10,12,15,18,20-21,23,25-27,29,31-34,36-37,39-41,44H2,1-2H3,(H,46,47)/b7-5-,13-11-,16-14-,19-17-,24-22-,30-28-,38-35-/t42-/m1/s1
InChI Key RDLRIZLZWSNORN-FSOAWXQVSA-N
Chemical Taxonomy
Kingdom Organic Compounds
Super Class Lipids
Class Glycerophospholipids
Sub Class Glycerophosphoethanolamines
Other Descriptors
  • Aliphatic Acyclic Compounds
Substituents
  • Acyclic Alkene
  • Carboxylic Acid Ester
  • Enol Ether
  • Fatty Acid Ester
  • Organic Hypophosphite
  • Organic Phosphite
  • Phosphoethanolamine
  • Phosphoric Acid Ester
  • Primary Aliphatic Amine (Alkylamine)
Direct Parent Phosphatidylethanolamines
Ontology
Status Expected and Not Quantified
Origin
  • Endogenous
  • Food
Biofunction
  • Cell signaling
  • Energy source
  • Fuel and energy storage
  • Fuel or energy source
  • Membrane component
  • Membrane integrity/stability
Application
  • Nutrients
  • Stabilizers
  • Surfactants and Emulsifiers
Cellular locations
  • Extracellular
  • Membrane
Physical Properties
State Solid
Experimental Properties
Property Value Reference
Melting Point Not Available Not Available
Boiling Point Not Available Not Available
Water Solubility Not Available Not Available
LogP Not Available Not Available
Predicted Properties
Property Value Source
Water Solubility 7.110E-05 g/L ALOGPS
LogP 8.97 ALOGPS
LogP 11.34 ChemAxon
LogS -7.02 ALOGPS
pKa (strongest acidic) 1.87 ChemAxon
pKa (strongest basic) 10 ChemAxon
Hydrogen Acceptor Count 5 ChemAxon
Hydrogen Donor Count 2 ChemAxon
Polar Surface Area 117.31 A2 ChemAxon
Rotatable Bond Count 38 ChemAxon
Refractivity 225.65 ChemAxon
Polarizability 87.99 ChemAxon
Formal Charge 0 ChemAxon
Physiological Charge 0 ChemAxon
Spectra
Not Available
Biological Properties
Cellular Locations
  • Extracellular
  • Membrane
Biofluid Locations Not Available
Tissue Location
  • All Tissues
  • Brain
Pathways Not Available
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease References None
Associated OMIM IDs None
DrugBank ID Not Available
Phenol Explorer Compound ID Not Available
Phenol Explorer Metabolite ID Not Available
FoodDB ID FDB005556
KNApSAcK ID Not Available
Chemspider ID 24769304 Link_out
KEGG Compound ID Not Available
BioCyc ID Not Available
BiGG ID Not Available
Wikipedia Link Not Available
NuGOwiki Link HMDB11420 Link_out
Metagene Link HMDB11420 Link_out
METLIN ID Not Available
PubChem Compound 53480880 Link_out
PDB ID Not Available
ChEBI ID Not Available
References
Synthesis Reference Not Available
Material Safety Data Sheet (MSDS) Not Available
General References Not Available

Enzymes
Name: Phospholipase D2
Reactions:
    Gene Name: PLD2
    Uniprot ID: O14939 Link_out
    Protein Sequence: FASTA
    Gene Sequence: FASTA
    Name: Phospholipase D1
    Reactions:
      Gene Name: PLD1
      Uniprot ID: Q13393 Link_out
      Protein Sequence: FASTA
      Gene Sequence: FASTA
      Name: Probable phospholipid-transporting ATPase IG
      Reactions:
        Gene Name: ATP11C
        Uniprot ID: Q8NB49 Link_out
        Protein Sequence: FASTA
        Gene Sequence: FASTA
        Name: Probable phospholipid-transporting ATPase IH
        Reactions:
          Gene Name: ATP11A
          Uniprot ID: P98196 Link_out
          Protein Sequence: FASTA
          Gene Sequence: FASTA
          Name: Probable phospholipid-transporting ATPase VA
          Reactions:
            Gene Name: ATP10A
            Uniprot ID: O60312 Link_out
            Protein Sequence: FASTA
            Gene Sequence: FASTA
            Name: Probable phospholipid-transporting ATPase IC
            Reactions:
              Gene Name: ATP8B1
              Uniprot ID: O43520 Link_out
              Protein Sequence: FASTA
              Gene Sequence: FASTA
              Name: Probable phospholipid-transporting ATPase IIA
              Reactions:
                Gene Name: ATP9A
                Uniprot ID: O75110 Link_out
                Protein Sequence: FASTA
                Gene Sequence: FASTA
                Name: Probable phospholipid-transporting ATPase VD
                Reactions:
                  Gene Name: ATP10D
                  Uniprot ID: Q9P241 Link_out
                  Protein Sequence: FASTA
                  Gene Sequence: FASTA
                  Name: Probable phospholipid-transporting ATPase IB
                  Reactions:
                    Gene Name: ATP8A2
                    Uniprot ID: Q9NTI2 Link_out
                    Protein Sequence: FASTA
                    Gene Sequence: FASTA
                    Name: Probable phospholipid-transporting ATPase IA
                    Reactions:
                      Gene Name: ATP8A1
                      Uniprot ID: Q9Y2Q0 Link_out
                      Protein Sequence: FASTA
                      Gene Sequence: FASTA
                      Name: Probable phospholipid-transporting ATPase IM
                      Reactions:
                        Gene Name: ATP8B4
                        Uniprot ID: Q8TF62 Link_out
                        Protein Sequence: FASTA
                        Gene Sequence: FASTA
                        Name: Probable phospholipid-transporting ATPase IF
                        Reactions:
                          Gene Name: ATP11B
                          Uniprot ID: Q9Y2G3 Link_out
                          Protein Sequence: FASTA
                          Gene Sequence: FASTA
                          Name: Probable phospholipid-transporting ATPase IK
                          Reactions:
                            Gene Name: ATP8B3
                            Uniprot ID: O60423 Link_out
                            Protein Sequence: FASTA
                            Gene Sequence: FASTA
                            Name: Phospholipid scramblase 1
                            Reactions:
                              Gene Name: PLSCR1
                              Uniprot ID: O15162 Link_out
                              Protein Sequence: FASTA
                              Gene Sequence: FASTA
                              Name: Phosphatidylserine decarboxylase proenzyme
                              Reactions:
                                Gene Name: PISD
                                Uniprot ID: Q9UG56 Link_out
                                Protein Sequence: FASTA
                                Gene Sequence: FASTA
                                Name: Phospholipid transfer protein
                                Reactions:
                                  Gene Name: PLTP
                                  Uniprot ID: P55058 Link_out
                                  Protein Sequence: FASTA
                                  Gene Sequence: FASTA
                                  Name: Choline/ethanolaminephosphotransferase 1
                                  Reactions:
                                    Gene Name: CEPT1
                                    Uniprot ID: Q9Y6K0 Link_out
                                    Protein Sequence: FASTA
                                    Gene Sequence: FASTA
                                    Name: Phospholipase D3
                                    Reactions:
                                      Gene Name: PLD3
                                      Uniprot ID: Q8IV08 Link_out
                                      Protein Sequence: FASTA
                                      Gene Sequence: FASTA
                                      Name: Phospholipase D4
                                      Reactions:
                                        Gene Name: PLD4
                                        Uniprot ID: Q96BZ4 Link_out
                                        Protein Sequence: FASTA
                                        Gene Sequence: FASTA
                                        Name: Phospholipid scramblase 2
                                        Reactions:
                                          Gene Name: PLSCR2
                                          Uniprot ID: Q9NRY7 Link_out
                                          Protein Sequence: FASTA
                                          Gene Sequence: FASTA
                                          Name: Phospholipid scramblase 3
                                          Reactions:
                                            Gene Name: PLSCR3
                                            Uniprot ID: Q9NRY6 Link_out
                                            Protein Sequence: FASTA
                                            Gene Sequence: FASTA
                                            Name: Phospholipid scramblase 4
                                            Reactions:
                                              Gene Name: PLSCR4
                                              Uniprot ID: Q9NRQ2 Link_out
                                              Protein Sequence: FASTA
                                              Gene Sequence: FASTA
                                              Name: Phospholipid scramblase family member 5
                                              Reactions:
                                                Gene Name: PLSCR5
                                                Uniprot ID: A0PG75 Link_out
                                                Protein Sequence: FASTA
                                                Gene Sequence: FASTA
                                                Name: Probable phospholipid-transporting ATPase VB
                                                Reactions:
                                                  Gene Name: ATP10B
                                                  Uniprot ID: O94823 Link_out
                                                  Protein Sequence: FASTA
                                                  Gene Sequence: FASTA
                                                  Name: Probable phospholipid-transporting ATPase ID
                                                  Reactions:
                                                    Gene Name: ATP8B2
                                                    Uniprot ID: P98198 Link_out
                                                    Protein Sequence: FASTA
                                                    Gene Sequence: FASTA
                                                    Name: Abhydrolase domain-containing protein 4
                                                    Reactions:
                                                      Gene Name: ABHD4
                                                      Uniprot ID: Q8TB40 Link_out
                                                      Protein Sequence: FASTA
                                                      Gene Sequence: FASTA
                                                      Name: N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D
                                                      Reactions:
                                                        Gene Name: NAPEPLD
                                                        Uniprot ID: Q6IQ20 Link_out
                                                        Protein Sequence: FASTA
                                                        Gene Sequence: FASTA
                                                        Name: Phosphatidylethanolamine-binding protein 1
                                                        Reactions:
                                                          Gene Name: PEBP1
                                                          Uniprot ID: P30086 Link_out
                                                          Protein Sequence: FASTA
                                                          Gene Sequence: FASTA
                                                          Name: Phosphatidylethanolamine-binding protein 4
                                                          Reactions:
                                                            Gene Name: PEBP4
                                                            Uniprot ID: Q96S96 Link_out
                                                            Protein Sequence: FASTA
                                                            Gene Sequence: FASTA
                                                            Name: Ethanolaminephosphotransferase 1
                                                            Reactions:
                                                              Gene Name: EPT1
                                                              Uniprot ID: Q9C0D9 Link_out
                                                              Protein Sequence: FASTA
                                                              Gene Sequence: FASTA