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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:30:42 UTC
Update Date2022-03-07 02:52:10 UTC
HMDB IDHMDB0029488
Secondary Accession Numbers
  • HMDB29488
Metabolite Identification
Common NameFarnesiferol A
DescriptionFarnesiferol A belongs to the class of organic compounds known as coumarins and derivatives. These are polycyclic aromatic compounds containing a 1-benzopyran moiety with a ketone group at the C2 carbon atom (1-benzopyran-2-one). Farnesiferol A has been detected, but not quantified in, green vegetables and herbs and spices. This could make farnesiferol a a potential biomarker for the consumption of these foods. Based on a literature review very few articles have been published on Farnesiferol A.
Structure
Data?1582753425
Synonyms
ValueSource
IsobadrakeminHMDB
MogoltadinHMDB
Chemical FormulaC24H30O4
Average Molecular Weight382.4926
Monoisotopic Molecular Weight382.214409448
IUPAC Name7-[(6-hydroxy-5,5,8a-trimethyl-2-methylidene-decahydronaphthalen-1-yl)methoxy]-2H-chromen-2-one
Traditional Name7-[(6-hydroxy-5,5,8a-trimethyl-2-methylidene-hexahydro-1H-naphthalen-1-yl)methoxy]chromen-2-one
CAS Registry Number511-33-1
SMILES
CC1(C)C(O)CCC2(C)C(COC3=CC4=C(C=CC(=O)O4)C=C3)C(=C)CCC12
InChI Identifier
InChI=1S/C24H30O4/c1-15-5-9-20-23(2,3)21(25)11-12-24(20,4)18(15)14-27-17-8-6-16-7-10-22(26)28-19(16)13-17/h6-8,10,13,18,20-21,25H,1,5,9,11-12,14H2,2-4H3
InChI KeyFCWYNTDTQPCVPG-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as coumarins and derivatives. These are polycyclic aromatic compounds containing a 1-benzopyran moiety with a ketone group at the C2 carbon atom (1-benzopyran-2-one).
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassCoumarins and derivatives
Sub ClassNot Available
Direct ParentCoumarins and derivatives
Alternative Parents
Substituents
  • Coumarin
  • Benzopyran
  • 1-benzopyran
  • Alkyl aryl ether
  • Pyranone
  • Pyran
  • Benzenoid
  • Cyclic alcohol
  • Heteroaromatic compound
  • Lactone
  • Secondary alcohol
  • Oxacycle
  • Ether
  • Organoheterocyclic compound
  • Organic oxygen compound
  • Organooxygen compound
  • Alcohol
  • Hydrocarbon derivative
  • Organic oxide
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
Role
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point155 - 155.5 °CNot Available
Boiling PointNot AvailableNot Available
Water Solubility0.22 mg/L @ 25 °C (est)The Good Scents Company Information System
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.0017 g/LALOGPS
logP4.52ALOGPS
logP4.34ChemAxon
logS-5.4ALOGPS
pKa (Strongest Acidic)19.49ChemAxon
pKa (Strongest Basic)-0.84ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count3ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area55.76 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity109.59 m³·mol⁻¹ChemAxon
Polarizability43.34 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+190.86831661259
DarkChem[M-H]-191.29331661259
DeepCCS[M-2H]-227.98630932474
DeepCCS[M+Na]+203.21430932474
AllCCS[M+H]+195.932859911
AllCCS[M+H-H2O]+193.432859911
AllCCS[M+NH4]+198.332859911
AllCCS[M+Na]+199.032859911
AllCCS[M-H]-196.832859911
AllCCS[M+Na-2H]-197.032859911
AllCCS[M+HCOO]-197.332859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Farnesiferol ACC1(C)C(O)CCC2(C)C(COC3=CC4=C(C=CC(=O)O4)C=C3)C(=C)CCC123714.6Standard polar33892256
Farnesiferol ACC1(C)C(O)CCC2(C)C(COC3=CC4=C(C=CC(=O)O4)C=C3)C(=C)CCC123195.6Standard non polar33892256
Farnesiferol ACC1(C)C(O)CCC2(C)C(COC3=CC4=C(C=CC(=O)O4)C=C3)C(=C)CCC123543.6Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Farnesiferol A,1TMS,isomer #1C=C1CCC2C(C)(C)C(O[Si](C)(C)C)CCC2(C)C1COC1=CC=C2C=CC(=O)OC2=C13386.8Semi standard non polar33892256
Farnesiferol A,1TBDMS,isomer #1C=C1CCC2C(C)(C)C(O[Si](C)(C)C(C)(C)C)CCC2(C)C1COC1=CC=C2C=CC(=O)OC2=C13600.5Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Farnesiferol A GC-MS (Non-derivatized) - 70eV, Positivesplash10-0zfr-0349000000-2a21b0aa7200f996399b2017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Farnesiferol A GC-MS (1 TMS) - 70eV, Positivesplash10-004r-4191700000-3297e30e8344ca5ab3802017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Farnesiferol A GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Experimental LC-MS/MSLC-MS/MS Spectrum - Farnesiferol A 40V, Positive-QTOFsplash10-03yj-0900000000-05964576a51d39fddb7d2021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Farnesiferol A 20V, Positive-QTOFsplash10-0bt9-0920000000-567eaf55eaadfc0a4c312021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Farnesiferol A 10V, Positive-QTOFsplash10-0i00-0943000000-0cf5f52dbe1590c02c392021-09-20HMDB team, MONAView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Farnesiferol A 10V, Positive-QTOFsplash10-0159-0029000000-1c8b3ea00fcc1846253b2015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Farnesiferol A 20V, Positive-QTOFsplash10-01c0-0249000000-b43ff0b3f900060853162015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Farnesiferol A 40V, Positive-QTOFsplash10-0w93-2930000000-d11045907d6ecf1297152015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Farnesiferol A 10V, Negative-QTOFsplash10-01q9-0309000000-6b292259003a2b2968e42015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Farnesiferol A 20V, Negative-QTOFsplash10-03e9-0509000000-4c480f4b3dc8ce305e9c2015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Farnesiferol A 40V, Negative-QTOFsplash10-014i-1900000000-081d6cbe4a4cefa0f9942015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Farnesiferol A 10V, Negative-QTOFsplash10-001i-0019000000-b7516f191d0ecc5314602021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Farnesiferol A 20V, Negative-QTOFsplash10-03di-0901000000-3c80e2af47bdf702d2e42021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Farnesiferol A 40V, Negative-QTOFsplash10-0159-0900000000-764566a5d05a98e465c82021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Farnesiferol A 10V, Positive-QTOFsplash10-0h3r-0497000000-a5451d573db8d98fd00e2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Farnesiferol A 20V, Positive-QTOFsplash10-03di-0779000000-9933f54e3cd8f19e05a82021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Farnesiferol A 40V, Positive-QTOFsplash10-01ox-3910000000-736da3299323d17f706c2021-09-24Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB000620
KNApSAcK IDC00037229
Chemspider ID433696
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound495441
PDB IDNot Available
ChEBI ID139463
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1809881
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .