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Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:36:34 UTC
Update Date2022-03-07 02:52:32 UTC
HMDB IDHMDB0030400
Secondary Accession Numbers
  • HMDB30400
Metabolite Identification
Common NameL-4-Chlorotryptophan
DescriptionL-4-Chlorotryptophan belongs to the class of organic compounds known as indolyl carboxylic acids and derivatives. Indolyl carboxylic acids and derivatives are compounds containing a carboxylic acid chain (of at least 2 carbon atoms) linked to an indole ring. L-4-Chlorotryptophan has been detected, but not quantified in, common peas (Pisum sativum) and pulses. This could make L-4-chlorotryptophan a potential biomarker for the consumption of these foods. Based on a literature review very few articles have been published on L-4-Chlorotryptophan.
Structure
Data?1563861979
Synonyms
ValueSource
S-4-ChlorotryptophanHMDB
2-Amino-3-(4-chloro-1H-indol-3-yl)propanoateGenerator
Chemical FormulaC11H11ClN2O2
Average Molecular Weight238.67
Monoisotopic Molecular Weight238.050905313
IUPAC Name2-amino-3-(4-chloro-1H-indol-3-yl)propanoic acid
Traditional Name2-amino-3-(4-chloro-1H-indol-3-yl)propanoic acid
CAS Registry Number52448-14-3
SMILES
NC(CC1=CNC2=CC=CC(Cl)=C12)C(O)=O
InChI Identifier
InChI=1S/C11H11ClN2O2/c12-7-2-1-3-9-10(7)6(5-14-9)4-8(13)11(15)16/h1-3,5,8,14H,4,13H2,(H,15,16)
InChI KeyNRTHKYABOMUPSC-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as indolyl carboxylic acids and derivatives. Indolyl carboxylic acids and derivatives are compounds containing a carboxylic acid chain (of at least 2 carbon atoms) linked to an indole ring.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassIndoles and derivatives
Sub ClassIndolyl carboxylic acids and derivatives
Direct ParentIndolyl carboxylic acids and derivatives
Alternative Parents
Substituents
  • Indolyl carboxylic acid derivative
  • Alpha-amino acid
  • Alpha-amino acid or derivatives
  • 3-alkylindole
  • Indole
  • Aralkylamine
  • Aryl chloride
  • Aryl halide
  • Benzenoid
  • Substituted pyrrole
  • Heteroaromatic compound
  • Pyrrole
  • Amino acid or derivatives
  • Amino acid
  • Carboxylic acid derivative
  • Carboxylic acid
  • Azacycle
  • Monocarboxylic acid or derivatives
  • Organopnictogen compound
  • Primary aliphatic amine
  • Primary amine
  • Amine
  • Organic oxygen compound
  • Organic nitrogen compound
  • Carbonyl group
  • Hydrocarbon derivative
  • Organic oxide
  • Organohalogen compound
  • Organochloride
  • Organonitrogen compound
  • Organooxygen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.61 g/LALOGPS
logP-0.47ALOGPS
logP-0.48ChemAxon
logS-2.6ALOGPS
pKa (Strongest Acidic)2.14ChemAxon
pKa (Strongest Basic)9.38ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count3ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area79.11 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity61.01 m³·mol⁻¹ChemAxon
Polarizability23.18 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M-2H]-178.34530932474
DeepCCS[M+Na]+153.92430932474
AllCCS[M+H]+151.832859911
AllCCS[M+H-H2O]+147.932859911
AllCCS[M+NH4]+155.432859911
AllCCS[M+Na]+156.432859911
AllCCS[M-H]-150.832859911
AllCCS[M+Na-2H]-150.932859911
AllCCS[M+HCOO]-151.032859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
L-4-ChlorotryptophanNC(CC1=CNC2=CC=CC(Cl)=C12)C(O)=O3363.0Standard polar33892256
L-4-ChlorotryptophanNC(CC1=CNC2=CC=CC(Cl)=C12)C(O)=O2128.9Standard non polar33892256
L-4-ChlorotryptophanNC(CC1=CNC2=CC=CC(Cl)=C12)C(O)=O2534.7Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
L-4-Chlorotryptophan,1TMS,isomer #1C[Si](C)(C)OC(=O)C(N)CC1=C[NH]C2=CC=CC(Cl)=C122365.8Semi standard non polar33892256
L-4-Chlorotryptophan,1TMS,isomer #2C[Si](C)(C)NC(CC1=C[NH]C2=CC=CC(Cl)=C12)C(=O)O2347.2Semi standard non polar33892256
L-4-Chlorotryptophan,1TMS,isomer #3C[Si](C)(C)N1C=C(CC(N)C(=O)O)C2=C(Cl)C=CC=C212371.1Semi standard non polar33892256
L-4-Chlorotryptophan,2TMS,isomer #1C[Si](C)(C)NC(CC1=C[NH]C2=CC=CC(Cl)=C12)C(=O)O[Si](C)(C)C2344.3Semi standard non polar33892256
L-4-Chlorotryptophan,2TMS,isomer #1C[Si](C)(C)NC(CC1=C[NH]C2=CC=CC(Cl)=C12)C(=O)O[Si](C)(C)C2246.3Standard non polar33892256
L-4-Chlorotryptophan,2TMS,isomer #2C[Si](C)(C)OC(=O)C(N)CC1=CN([Si](C)(C)C)C2=CC=CC(Cl)=C122382.7Semi standard non polar33892256
L-4-Chlorotryptophan,2TMS,isomer #2C[Si](C)(C)OC(=O)C(N)CC1=CN([Si](C)(C)C)C2=CC=CC(Cl)=C122251.4Standard non polar33892256
L-4-Chlorotryptophan,2TMS,isomer #3C[Si](C)(C)N(C(CC1=C[NH]C2=CC=CC(Cl)=C12)C(=O)O)[Si](C)(C)C2507.3Semi standard non polar33892256
L-4-Chlorotryptophan,2TMS,isomer #3C[Si](C)(C)N(C(CC1=C[NH]C2=CC=CC(Cl)=C12)C(=O)O)[Si](C)(C)C2358.1Standard non polar33892256
L-4-Chlorotryptophan,2TMS,isomer #4C[Si](C)(C)NC(CC1=CN([Si](C)(C)C)C2=CC=CC(Cl)=C12)C(=O)O2370.3Semi standard non polar33892256
L-4-Chlorotryptophan,2TMS,isomer #4C[Si](C)(C)NC(CC1=CN([Si](C)(C)C)C2=CC=CC(Cl)=C12)C(=O)O2288.7Standard non polar33892256
L-4-Chlorotryptophan,3TMS,isomer #1C[Si](C)(C)OC(=O)C(CC1=C[NH]C2=CC=CC(Cl)=C12)N([Si](C)(C)C)[Si](C)(C)C2495.3Semi standard non polar33892256
L-4-Chlorotryptophan,3TMS,isomer #1C[Si](C)(C)OC(=O)C(CC1=C[NH]C2=CC=CC(Cl)=C12)N([Si](C)(C)C)[Si](C)(C)C2413.4Standard non polar33892256
L-4-Chlorotryptophan,3TMS,isomer #2C[Si](C)(C)NC(CC1=CN([Si](C)(C)C)C2=CC=CC(Cl)=C12)C(=O)O[Si](C)(C)C2351.0Semi standard non polar33892256
L-4-Chlorotryptophan,3TMS,isomer #2C[Si](C)(C)NC(CC1=CN([Si](C)(C)C)C2=CC=CC(Cl)=C12)C(=O)O[Si](C)(C)C2333.7Standard non polar33892256
L-4-Chlorotryptophan,3TMS,isomer #3C[Si](C)(C)N(C(CC1=CN([Si](C)(C)C)C2=CC=CC(Cl)=C12)C(=O)O)[Si](C)(C)C2536.2Semi standard non polar33892256
L-4-Chlorotryptophan,3TMS,isomer #3C[Si](C)(C)N(C(CC1=CN([Si](C)(C)C)C2=CC=CC(Cl)=C12)C(=O)O)[Si](C)(C)C2451.4Standard non polar33892256
L-4-Chlorotryptophan,4TMS,isomer #1C[Si](C)(C)OC(=O)C(CC1=CN([Si](C)(C)C)C2=CC=CC(Cl)=C12)N([Si](C)(C)C)[Si](C)(C)C2566.3Semi standard non polar33892256
L-4-Chlorotryptophan,4TMS,isomer #1C[Si](C)(C)OC(=O)C(CC1=CN([Si](C)(C)C)C2=CC=CC(Cl)=C12)N([Si](C)(C)C)[Si](C)(C)C2484.4Standard non polar33892256
L-4-Chlorotryptophan,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)C(N)CC1=C[NH]C2=CC=CC(Cl)=C122657.2Semi standard non polar33892256
L-4-Chlorotryptophan,1TBDMS,isomer #2CC(C)(C)[Si](C)(C)NC(CC1=C[NH]C2=CC=CC(Cl)=C12)C(=O)O2620.8Semi standard non polar33892256
L-4-Chlorotryptophan,1TBDMS,isomer #3CC(C)(C)[Si](C)(C)N1C=C(CC(N)C(=O)O)C2=C(Cl)C=CC=C212652.4Semi standard non polar33892256
L-4-Chlorotryptophan,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)NC(CC1=C[NH]C2=CC=CC(Cl)=C12)C(=O)O[Si](C)(C)C(C)(C)C2833.2Semi standard non polar33892256
L-4-Chlorotryptophan,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)NC(CC1=C[NH]C2=CC=CC(Cl)=C12)C(=O)O[Si](C)(C)C(C)(C)C2726.8Standard non polar33892256
L-4-Chlorotryptophan,2TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC(=O)C(N)CC1=CN([Si](C)(C)C(C)(C)C)C2=CC=CC(Cl)=C122872.8Semi standard non polar33892256
L-4-Chlorotryptophan,2TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC(=O)C(N)CC1=CN([Si](C)(C)C(C)(C)C)C2=CC=CC(Cl)=C122684.7Standard non polar33892256
L-4-Chlorotryptophan,2TBDMS,isomer #3CC(C)(C)[Si](C)(C)N(C(CC1=C[NH]C2=CC=CC(Cl)=C12)C(=O)O)[Si](C)(C)C(C)(C)C3003.7Semi standard non polar33892256
L-4-Chlorotryptophan,2TBDMS,isomer #3CC(C)(C)[Si](C)(C)N(C(CC1=C[NH]C2=CC=CC(Cl)=C12)C(=O)O)[Si](C)(C)C(C)(C)C2790.0Standard non polar33892256
L-4-Chlorotryptophan,2TBDMS,isomer #4CC(C)(C)[Si](C)(C)NC(CC1=CN([Si](C)(C)C(C)(C)C)C2=CC=CC(Cl)=C12)C(=O)O2849.3Semi standard non polar33892256
L-4-Chlorotryptophan,2TBDMS,isomer #4CC(C)(C)[Si](C)(C)NC(CC1=CN([Si](C)(C)C(C)(C)C)C2=CC=CC(Cl)=C12)C(=O)O2731.7Standard non polar33892256
L-4-Chlorotryptophan,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)C(CC1=C[NH]C2=CC=CC(Cl)=C12)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C3210.6Semi standard non polar33892256
L-4-Chlorotryptophan,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)C(CC1=C[NH]C2=CC=CC(Cl)=C12)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C3043.3Standard non polar33892256
L-4-Chlorotryptophan,3TBDMS,isomer #2CC(C)(C)[Si](C)(C)NC(CC1=CN([Si](C)(C)C(C)(C)C)C2=CC=CC(Cl)=C12)C(=O)O[Si](C)(C)C(C)(C)C3025.9Semi standard non polar33892256
L-4-Chlorotryptophan,3TBDMS,isomer #2CC(C)(C)[Si](C)(C)NC(CC1=CN([Si](C)(C)C(C)(C)C)C2=CC=CC(Cl)=C12)C(=O)O[Si](C)(C)C(C)(C)C2955.8Standard non polar33892256
L-4-Chlorotryptophan,3TBDMS,isomer #3CC(C)(C)[Si](C)(C)N(C(CC1=CN([Si](C)(C)C(C)(C)C)C2=CC=CC(Cl)=C12)C(=O)O)[Si](C)(C)C(C)(C)C3210.7Semi standard non polar33892256
L-4-Chlorotryptophan,3TBDMS,isomer #3CC(C)(C)[Si](C)(C)N(C(CC1=CN([Si](C)(C)C(C)(C)C)C2=CC=CC(Cl)=C12)C(=O)O)[Si](C)(C)C(C)(C)C3006.4Standard non polar33892256
L-4-Chlorotryptophan,4TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)C(CC1=CN([Si](C)(C)C(C)(C)C)C2=CC=CC(Cl)=C12)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C3397.8Semi standard non polar33892256
L-4-Chlorotryptophan,4TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)C(CC1=CN([Si](C)(C)C(C)(C)C)C2=CC=CC(Cl)=C12)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C3215.0Standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - L-4-Chlorotryptophan GC-MS (Non-derivatized) - 70eV, Positivesplash10-0006-8920000000-09010aadd4856387045a2017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - L-4-Chlorotryptophan GC-MS (1 TMS) - 70eV, Positivesplash10-0006-4910000000-8f35950521db532c4ad22017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - L-4-Chlorotryptophan GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - L-4-Chlorotryptophan GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - L-4-Chlorotryptophan 10V, Positive-QTOFsplash10-000f-0960000000-7f685aa7590030a80fa32016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - L-4-Chlorotryptophan 20V, Positive-QTOFsplash10-0006-0910000000-21cc5e0ef61308a346272016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - L-4-Chlorotryptophan 40V, Positive-QTOFsplash10-03di-0900000000-26b8f9d5ff082b8f8cba2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - L-4-Chlorotryptophan 10V, Negative-QTOFsplash10-000i-2190000000-7ed37e867c9fa070e33d2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - L-4-Chlorotryptophan 20V, Negative-QTOFsplash10-00di-9650000000-494ea83992219f8b9e192016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - L-4-Chlorotryptophan 40V, Negative-QTOFsplash10-00di-9600000000-fffc10e909a72be2085e2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - L-4-Chlorotryptophan 10V, Positive-QTOFsplash10-00di-0190000000-e98f5f82386216a36a1e2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - L-4-Chlorotryptophan 20V, Positive-QTOFsplash10-0fbc-0930000000-3ea1089e5cf6b15bbe2f2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - L-4-Chlorotryptophan 40V, Positive-QTOFsplash10-004i-0900000000-30b019fdc4665810d7602021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - L-4-Chlorotryptophan 10V, Negative-QTOFsplash10-000i-0090000000-539524ca9294b71cc0b62021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - L-4-Chlorotryptophan 20V, Negative-QTOFsplash10-0udi-4900000000-1885970c38ac1ffbd8392021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - L-4-Chlorotryptophan 40V, Negative-QTOFsplash10-0ik9-1900000000-95c324747208d6704cbd2021-09-22Wishart LabView Spectrum

NMR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted 1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-30Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Cytoplasm
  • Extracellular
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB002256
KNApSAcK IDNot Available
Chemspider ID10498613
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound14048817
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .