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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:38:26 UTC
Update Date2022-03-07 02:52:39 UTC
HMDB IDHMDB0030689
Secondary Accession Numbers
  • HMDB30689
Metabolite Identification
Common Name6''-O-Acetyldaidzin
Description6''-O-Acetyldaidzin belongs to the class of organic compounds known as isoflavonoid o-glycosides. These are o-glycosylated derivatives of isoflavonoids, which are natural products derived from 3-phenylchromen-4-one. 6''-O-Acetyldaidzin is found, on average, in the highest concentration within a few different foods, such as soy beans (Glycine max), yogurt, and soy yogurt and in a lower concentration in soy milk, other soy product, and miso. 6''-O-Acetyldaidzin has also been detected, but not quantified in, pulses and soy sauce. This could make 6''-O-acetyldaidzin a potential biomarker for the consumption of these foods. Based on a literature review a small amount of articles have been published on 6''-O-Acetyldaidzin.
Structure
Data?1563862023
Synonyms
ValueSource
6"-O-acetyldaidzinHMDB
6-O-AcetyldaidzinHMDB
Daidzein 6''-O-acetateHMDB
(3,4,5-Trihydroxy-6-{[3-(4-hydroxyphenyl)-4-oxo-4H-chromen-7-yl]oxy}oxan-2-yl)methyl acetic acidGenerator
Chemical FormulaC23H22O10
Average Molecular Weight458.419
Monoisotopic Molecular Weight458.121296908
IUPAC Name(3,4,5-trihydroxy-6-{[3-(4-hydroxyphenyl)-4-oxo-4H-chromen-7-yl]oxy}oxan-2-yl)methyl acetate
Traditional Name(3,4,5-trihydroxy-6-{[3-(4-hydroxyphenyl)-4-oxochromen-7-yl]oxy}oxan-2-yl)methyl acetate
CAS Registry Number71385-83-6
SMILES
CC(=O)OCC1OC(OC2=CC3=C(C=C2)C(=O)C(=CO3)C2=CC=C(O)C=C2)C(O)C(O)C1O
InChI Identifier
InChI=1S/C23H22O10/c1-11(24)30-10-18-20(27)21(28)22(29)23(33-18)32-14-6-7-15-17(8-14)31-9-16(19(15)26)12-2-4-13(25)5-3-12/h2-9,18,20-23,25,27-29H,10H2,1H3
InChI KeyZMOZJTDOTOZVRT-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as isoflavonoid o-glycosides. These are o-glycosylated derivatives of isoflavonoids, which are natural products derived from 3-phenylchromen-4-one.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassIsoflavonoids
Sub ClassIsoflavonoid O-glycosides
Direct ParentIsoflavonoid O-glycosides
Alternative Parents
Substituents
  • Isoflavonoid o-glycoside
  • Isoflavonoid-7-o-glycoside
  • Isoflavone
  • Phenolic glycoside
  • Chromone
  • Glycosyl compound
  • O-glycosyl compound
  • Benzopyran
  • 1-benzopyran
  • 1-hydroxy-2-unsubstituted benzenoid
  • Phenol
  • Pyranone
  • Monocyclic benzene moiety
  • Monosaccharide
  • Benzenoid
  • Oxane
  • Pyran
  • Heteroaromatic compound
  • Carboxylic acid ester
  • Secondary alcohol
  • Monocarboxylic acid or derivatives
  • Organoheterocyclic compound
  • Oxacycle
  • Carboxylic acid derivative
  • Acetal
  • Polyol
  • Alcohol
  • Hydrocarbon derivative
  • Organic oxide
  • Carbonyl group
  • Organooxygen compound
  • Organic oxygen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
Role
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point186 - 189 °CNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.35 g/LALOGPS
logP1.43ALOGPS
logP0.9ChemAxon
logS-3.1ALOGPS
pKa (Strongest Acidic)8.96ChemAxon
pKa (Strongest Basic)-3.6ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count9ChemAxon
Hydrogen Donor Count4ChemAxon
Polar Surface Area151.98 ŲChemAxon
Rotatable Bond Count6ChemAxon
Refractivity111 m³·mol⁻¹ChemAxon
Polarizability45.38 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+210.65831661259
DarkChem[M-H]-203.68631661259
DeepCCS[M+H]+200.34430932474
DeepCCS[M-H]-197.94830932474
DeepCCS[M-2H]-230.85730932474
DeepCCS[M+Na]+206.25630932474
AllCCS[M+H]+206.132859911
AllCCS[M+H-H2O]+203.932859911
AllCCS[M+NH4]+208.232859911
AllCCS[M+Na]+208.732859911
AllCCS[M-H]-202.732859911
AllCCS[M+Na-2H]-203.432859911
AllCCS[M+HCOO]-204.232859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
6''-O-AcetyldaidzinCC(=O)OCC1OC(OC2=CC3=C(C=C2)C(=O)C(=CO3)C2=CC=C(O)C=C2)C(O)C(O)C1O5113.6Standard polar33892256
6''-O-AcetyldaidzinCC(=O)OCC1OC(OC2=CC3=C(C=C2)C(=O)C(=CO3)C2=CC=C(O)C=C2)C(O)C(O)C1O3813.0Standard non polar33892256
6''-O-AcetyldaidzinCC(=O)OCC1OC(OC2=CC3=C(C=C2)C(=O)C(=CO3)C2=CC=C(O)C=C2)C(O)C(O)C1O4404.1Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
6''-O-Acetyldaidzin,1TMS,isomer #1CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(O[Si](C)(C)C)C=C4)=COC3=C2)C(O)C(O)C1O4201.3Semi standard non polar33892256
6''-O-Acetyldaidzin,1TMS,isomer #2CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(O)C=C4)=COC3=C2)C(O[Si](C)(C)C)C(O)C1O4204.1Semi standard non polar33892256
6''-O-Acetyldaidzin,1TMS,isomer #3CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(O)C=C4)=COC3=C2)C(O)C(O[Si](C)(C)C)C1O4204.9Semi standard non polar33892256
6''-O-Acetyldaidzin,1TMS,isomer #4CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(O)C=C4)=COC3=C2)C(O)C(O)C1O[Si](C)(C)C4191.3Semi standard non polar33892256
6''-O-Acetyldaidzin,2TMS,isomer #1CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(O[Si](C)(C)C)C=C4)=COC3=C2)C(O[Si](C)(C)C)C(O)C1O4057.7Semi standard non polar33892256
6''-O-Acetyldaidzin,2TMS,isomer #2CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(O[Si](C)(C)C)C=C4)=COC3=C2)C(O)C(O[Si](C)(C)C)C1O4053.6Semi standard non polar33892256
6''-O-Acetyldaidzin,2TMS,isomer #3CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(O[Si](C)(C)C)C=C4)=COC3=C2)C(O)C(O)C1O[Si](C)(C)C4060.6Semi standard non polar33892256
6''-O-Acetyldaidzin,2TMS,isomer #4CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(O)C=C4)=COC3=C2)C(O[Si](C)(C)C)C(O[Si](C)(C)C)C1O4076.4Semi standard non polar33892256
6''-O-Acetyldaidzin,2TMS,isomer #5CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(O)C=C4)=COC3=C2)C(O[Si](C)(C)C)C(O)C1O[Si](C)(C)C4094.0Semi standard non polar33892256
6''-O-Acetyldaidzin,2TMS,isomer #6CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(O)C=C4)=COC3=C2)C(O)C(O[Si](C)(C)C)C1O[Si](C)(C)C4079.6Semi standard non polar33892256
6''-O-Acetyldaidzin,3TMS,isomer #1CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(O[Si](C)(C)C)C=C4)=COC3=C2)C(O[Si](C)(C)C)C(O[Si](C)(C)C)C1O3970.5Semi standard non polar33892256
6''-O-Acetyldaidzin,3TMS,isomer #2CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(O[Si](C)(C)C)C=C4)=COC3=C2)C(O[Si](C)(C)C)C(O)C1O[Si](C)(C)C3991.6Semi standard non polar33892256
6''-O-Acetyldaidzin,3TMS,isomer #3CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(O[Si](C)(C)C)C=C4)=COC3=C2)C(O)C(O[Si](C)(C)C)C1O[Si](C)(C)C3970.4Semi standard non polar33892256
6''-O-Acetyldaidzin,3TMS,isomer #4CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(O)C=C4)=COC3=C2)C(O[Si](C)(C)C)C(O[Si](C)(C)C)C1O[Si](C)(C)C4034.9Semi standard non polar33892256
6''-O-Acetyldaidzin,4TMS,isomer #1CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(O[Si](C)(C)C)C=C4)=COC3=C2)C(O[Si](C)(C)C)C(O[Si](C)(C)C)C1O[Si](C)(C)C3950.8Semi standard non polar33892256
6''-O-Acetyldaidzin,1TBDMS,isomer #1CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(O[Si](C)(C)C(C)(C)C)C=C4)=COC3=C2)C(O)C(O)C1O4437.9Semi standard non polar33892256
6''-O-Acetyldaidzin,1TBDMS,isomer #2CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(O)C=C4)=COC3=C2)C(O[Si](C)(C)C(C)(C)C)C(O)C1O4477.0Semi standard non polar33892256
6''-O-Acetyldaidzin,1TBDMS,isomer #3CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(O)C=C4)=COC3=C2)C(O)C(O[Si](C)(C)C(C)(C)C)C1O4476.2Semi standard non polar33892256
6''-O-Acetyldaidzin,1TBDMS,isomer #4CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(O)C=C4)=COC3=C2)C(O)C(O)C1O[Si](C)(C)C(C)(C)C4469.4Semi standard non polar33892256
6''-O-Acetyldaidzin,2TBDMS,isomer #1CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(O[Si](C)(C)C(C)(C)C)C=C4)=COC3=C2)C(O[Si](C)(C)C(C)(C)C)C(O)C1O4586.9Semi standard non polar33892256
6''-O-Acetyldaidzin,2TBDMS,isomer #2CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(O[Si](C)(C)C(C)(C)C)C=C4)=COC3=C2)C(O)C(O[Si](C)(C)C(C)(C)C)C1O4577.5Semi standard non polar33892256
6''-O-Acetyldaidzin,2TBDMS,isomer #3CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(O[Si](C)(C)C(C)(C)C)C=C4)=COC3=C2)C(O)C(O)C1O[Si](C)(C)C(C)(C)C4595.2Semi standard non polar33892256
6''-O-Acetyldaidzin,2TBDMS,isomer #4CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(O)C=C4)=COC3=C2)C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C1O4600.1Semi standard non polar33892256
6''-O-Acetyldaidzin,2TBDMS,isomer #5CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(O)C=C4)=COC3=C2)C(O[Si](C)(C)C(C)(C)C)C(O)C1O[Si](C)(C)C(C)(C)C4621.6Semi standard non polar33892256
6''-O-Acetyldaidzin,2TBDMS,isomer #6CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(O)C=C4)=COC3=C2)C(O)C(O[Si](C)(C)C(C)(C)C)C1O[Si](C)(C)C(C)(C)C4612.2Semi standard non polar33892256
6''-O-Acetyldaidzin,3TBDMS,isomer #1CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(O[Si](C)(C)C(C)(C)C)C=C4)=COC3=C2)C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C1O4701.3Semi standard non polar33892256
6''-O-Acetyldaidzin,3TBDMS,isomer #2CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(O[Si](C)(C)C(C)(C)C)C=C4)=COC3=C2)C(O[Si](C)(C)C(C)(C)C)C(O)C1O[Si](C)(C)C(C)(C)C4724.7Semi standard non polar33892256
6''-O-Acetyldaidzin,3TBDMS,isomer #3CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(O[Si](C)(C)C(C)(C)C)C=C4)=COC3=C2)C(O)C(O[Si](C)(C)C(C)(C)C)C1O[Si](C)(C)C(C)(C)C4700.8Semi standard non polar33892256
6''-O-Acetyldaidzin,3TBDMS,isomer #4CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(O)C=C4)=COC3=C2)C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C1O[Si](C)(C)C(C)(C)C4723.7Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - 6''-O-Acetyldaidzin GC-MS (Non-derivatized) - 70eV, Positivesplash10-0a4l-9334500000-380823433d6fc23ef6362017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 6''-O-Acetyldaidzin GC-MS (3 TMS) - 70eV, Positivesplash10-0r03-4133009000-3493ed7aaa29f3bdcceb2017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 6''-O-Acetyldaidzin GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Experimental LC-MS/MSLC-MS/MS Spectrum - 6''-O-Acetyldaidzin 6V, Positive-QTOFsplash10-0a4i-0190100000-5026e86462778f1bf8512021-09-20HMDB team, MONAView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6''-O-Acetyldaidzin 10V, Positive-QTOFsplash10-0a4i-1092600000-3b19d6e84cb3fd3d33922015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6''-O-Acetyldaidzin 20V, Positive-QTOFsplash10-0a4i-0090000000-6227eb87833c05a4d5ba2015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6''-O-Acetyldaidzin 40V, Positive-QTOFsplash10-0a6r-3290000000-bbd3bced8babef48bd982015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6''-O-Acetyldaidzin 10V, Negative-QTOFsplash10-0a4i-9141600000-26f693d837da71111b002015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6''-O-Acetyldaidzin 20V, Negative-QTOFsplash10-0zfr-9071000000-87ff915f3f672dd9f8a72015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6''-O-Acetyldaidzin 40V, Negative-QTOFsplash10-0zfr-8290000000-37355f579429bdeca8972015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6''-O-Acetyldaidzin 10V, Negative-QTOFsplash10-0udi-0190000000-f89528e5904428bcdde12021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6''-O-Acetyldaidzin 20V, Negative-QTOFsplash10-0udi-1090000000-8f2cf39081314acb209e2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6''-O-Acetyldaidzin 40V, Negative-QTOFsplash10-0fb9-1190000000-81f27a425ee6c55d24d32021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6''-O-Acetyldaidzin 10V, Positive-QTOFsplash10-0a4i-0090000000-f9ac9b74dd03f5f44a652021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6''-O-Acetyldaidzin 20V, Positive-QTOFsplash10-0a4i-0190000000-f0b7e7de5306eb3b80b62021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6''-O-Acetyldaidzin 40V, Positive-QTOFsplash10-0a4l-7291200000-c51d9991bc2867b40bf02021-09-25Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Cytoplasm
  • Extracellular
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB002609
KNApSAcK IDC00010078
Chemspider ID26463584
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound53398699
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .

Enzymes

General function:
Lipid transport and metabolism
Specific function:
Involved in the detoxification of xenobiotics and in the activation of ester and amide prodrugs. Hydrolyzes aromatic and aliphatic esters, but has no catalytic activity toward amides or a fatty acyl-CoA ester. Hydrolyzes the methyl ester group of cocaine to form benzoylecgonine. Catalyzes the transesterification of cocaine to form cocaethylene. Displays fatty acid ethyl ester synthase activity, catalyzing the ethyl esterification of oleic acid to ethyloleate.
Gene Name:
CES1
Uniprot ID:
P23141
Molecular weight:
62520.62
Reactions
6''-O-Acetyldaidzin → 3-(4-hydroxyphenyl)-7-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-4H-chromen-4-onedetails