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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2012-09-11 17:42:56 UTC
Update Date2023-02-21 17:20:29 UTC
HMDB IDHMDB0031404
Secondary Accession Numbers
  • HMDB31404
Metabolite Identification
Common NameCyclohexylamine
DescriptionCyclohexylamine is a food contaminant arising from its use as a boiler water additive Cyclohexylamine, also called hexahydroaniline, 1-aminocyclohexane, or aminohexahydrobenzene, is an organic chemical, an amine derived from cyclohexane. It is a clear to yellowish liquid with fishy odor, with melting point of 17.7 °C and boiling point 134.5 °C, miscible with water. Like other amines, it is of mildly alkaline nature, compared to strong bases such as NaOH, but it is a stronger base than its aromatic sister compound aniline, which differs only in that its ring is aromatic. It is flammable, with flash point at 28.6 °C. Explosive mixtures with air can be formed above 26 °C. It is toxic by both ingestion and inhalation; the inhalation itself may be fatal. It readily absorbs through skin, which it irritates. It is corrosive. Cyclohexylamine is listed as an extremely hazardous substance as defined by Section 302 of the U.S. Emergency Planning and Community Right-to-Know Act
Structure
Data?1677000029
Synonyms
ValueSource
CyclohexanamineChEBI
1-amino-CYCLOHEXANEHMDB
1-AminocyclohexaneHMDB
1-CyclohexylamineHMDB
AminocyclohexaneHMDB
AminocylcohexaneHMDB
AminohexahydrobenzeneHMDB
CHAHMDB
Cyclohexanamine, 9ciHMDB
Cyclohexyl amineHMDB
Cyclohexylamine.HCLHMDB
HAIHMDB
hexahydro-AnilineHMDB
hexahydro-BenzenamineHMDB
HexahydroanilineHMDB
HexahydrobenzenamineHMDB
CyclohexylaminesMeSH, HMDB
Chemical FormulaC6H13N
Average Molecular Weight99.1741
Monoisotopic Molecular Weight99.104799421
IUPAC Namecyclohexanamine
Traditional Namecyclohexylamine
CAS Registry Number108-91-8
SMILES
NC1CCCCC1
InChI Identifier
InChI=1S/C6H13N/c7-6-4-2-1-3-5-6/h6H,1-5,7H2
InChI KeyPAFZNILMFXTMIY-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as cyclohexylamines. These are organic compounds containing a cyclohexylamine moiety, which consist of a cyclohexane ring attached to an amine group.
KingdomOrganic compounds
Super ClassOrganic nitrogen compounds
ClassOrganonitrogen compounds
Sub ClassCyclohexylamines
Direct ParentCyclohexylamines
Alternative Parents
Substituents
  • Cyclohexylamine
  • Organopnictogen compound
  • Hydrocarbon derivative
  • Primary amine
  • Primary aliphatic amine
  • Amine
  • Aliphatic homomonocyclic compound
Molecular FrameworkAliphatic homomonocyclic compounds
External Descriptors
Ontology
Physiological effect
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateLiquid
Experimental Molecular Properties
PropertyValueReference
Melting Point-18 °CNot Available
Boiling Point134.00 °C. @ 760.00 mm HgThe Good Scents Company Information System
Water Solubility1000 mg/mL at 20 °CNot Available
LogP1.49Not Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility7.82 g/LALOGPS
logP1.3ALOGPS
logP1.17ChemAxon
logS-1.1ALOGPS
pKa (Strongest Basic)10.45ChemAxon
Physiological Charge1ChemAxon
Hydrogen Acceptor Count1ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area26.02 ŲChemAxon
Rotatable Bond Count0ChemAxon
Refractivity30.93 m³·mol⁻¹ChemAxon
Polarizability12.44 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+119.81231661259
DarkChem[M-H]-113.71831661259
DeepCCS[M+H]+129.66630932474
DeepCCS[M-H]-127.64730932474
DeepCCS[M-2H]-163.05130932474
DeepCCS[M+Na]+137.59230932474
AllCCS[M+H]+122.732859911
AllCCS[M+H-H2O]+117.832859911
AllCCS[M+NH4]+127.332859911
AllCCS[M+Na]+128.632859911
AllCCS[M-H]-120.432859911
AllCCS[M+Na-2H]-123.632859911
AllCCS[M+HCOO]-127.132859911

Predicted Retention Times

Underivatized

Chromatographic MethodRetention TimeReference
Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. Predicted by Afia on May 17, 2022.1.56 minutes32390414
Predicted by Siyang on May 30, 20229.3853 minutes33406817
Predicted by Siyang using ReTip algorithm on June 8, 20225.6 minutes32390414
AjsUoB = Accucore 150 Amide HILIC with 10mM Ammonium Formate, 0.1% Formic Acid183.4 seconds40023050
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid981.9 seconds40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid316.7 seconds40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid109.7 seconds40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid195.0 seconds40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid160.9 seconds40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid251.4 seconds40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid284.8 seconds40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)515.0 seconds40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid766.7 seconds40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid200.8 seconds40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid774.0 seconds40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid189.5 seconds40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid237.3 seconds40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate685.4 seconds40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA360.0 seconds40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water194.8 seconds40023050

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
CyclohexylamineNC1CCCCC11191.7Standard polar33892256
CyclohexylamineNC1CCCCC1835.4Standard non polar33892256
CyclohexylamineNC1CCCCC1861.5Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Cyclohexylamine,1TMS,isomer #1C[Si](C)(C)NC1CCCCC11052.6Semi standard non polar33892256
Cyclohexylamine,1TMS,isomer #1C[Si](C)(C)NC1CCCCC11047.1Standard non polar33892256
Cyclohexylamine,2TMS,isomer #1C[Si](C)(C)N(C1CCCCC1)[Si](C)(C)C1304.8Semi standard non polar33892256
Cyclohexylamine,2TMS,isomer #1C[Si](C)(C)N(C1CCCCC1)[Si](C)(C)C1296.5Standard non polar33892256
Cyclohexylamine,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)NC1CCCCC11305.7Semi standard non polar33892256
Cyclohexylamine,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)NC1CCCCC11254.2Standard non polar33892256
Cyclohexylamine,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)N(C1CCCCC1)[Si](C)(C)C(C)(C)C1713.7Semi standard non polar33892256
Cyclohexylamine,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)N(C1CCCCC1)[Si](C)(C)C(C)(C)C1671.8Standard non polar33892256
Spectra
Biological Properties
Cellular Locations
  • Cytoplasm
  • Extracellular
Biospecimen Locations
  • Blood
  • Feces
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedAdult (>18 years old)Both
Normal
details
FecesDetected but not QuantifiedNot QuantifiedNot SpecifiedNot Specified
Normal
details
Abnormal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedAdult (>18 years old)Both
Schizophrenia
details
Associated Disorders and Diseases
Disease References
Schizophrenia
  1. Koike S, Bundo M, Iwamoto K, Suga M, Kuwabara H, Ohashi Y, Shinoda K, Takano Y, Iwashiro N, Satomura Y, Nagai T, Natsubori T, Tada M, Yamasue H, Kasai K: A snapshot of plasma metabolites in first-episode schizophrenia: a capillary electrophoresis time-of-flight mass spectrometry study. Transl Psychiatry. 2014 Apr 8;4:e379. doi: 10.1038/tp.2014.19. [PubMed:24713860 ]
Associated OMIM IDs
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB003478
KNApSAcK IDC00044142
Chemspider ID7677
KEGG Compound IDC00571
BioCyc IDCPD-303
BiGG IDNot Available
Wikipedia LinkCyclohexylamine
METLIN IDNot Available
PubChem Compound7965
PDB IDNot Available
ChEBI ID15773
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1232791
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Download (PDF)
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .