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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:48:52 UTC
Update Date2023-02-21 17:21:50 UTC
HMDB IDHMDB0032273
Secondary Accession Numbers
  • HMDB32273
Metabolite Identification
Common NameN-Ethyl trans-2-cis-6-nonadienamide
DescriptionN-Ethyl trans-2-cis-6-nonadienamide belongs to the class of organic compounds known as n-acyl amines. N-acyl amines are compounds containing a fatty acid moiety linked to an amine group through an ester linkage. Thus, N-ethyl trans-2-cis-6-nonadienamide is considered to be a fatty amide. Based on a literature review a small amount of articles have been published on N-Ethyl trans-2-cis-6-nonadienamide.
Structure
Data?1677000110
Synonyms
ValueSource
AtrazineHMDB
Chemical FormulaC11H19NO
Average Molecular Weight181.2747
Monoisotopic Molecular Weight181.146664235
IUPAC Name(2E,6Z)-N-ethylnona-2,6-dienamide
Traditional Name(2E,6Z)-N-ethylnona-2,6-dienamide
CAS Registry Number608514-56-3
SMILES
CCNC(=O)\C=C\CC\C=C/CC
InChI Identifier
InChI=1S/C11H19NO/c1-3-5-6-7-8-9-10-11(13)12-4-2/h5-6,9-10H,3-4,7-8H2,1-2H3,(H,12,13)/b6-5-,10-9+
InChI KeyARSJQOAYGVNWEK-MLCWLASSSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as n-acyl amines. N-acyl amines are compounds containing a fatty acid moiety linked to an amine group through an ester linkage.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassFatty Acyls
Sub ClassFatty amides
Direct ParentN-acyl amines
Alternative Parents
Substituents
  • N-acyl-amine
  • Secondary carboxylic acid amide
  • Carboxamide group
  • Carboxylic acid derivative
  • Organic nitrogen compound
  • Organic oxygen compound
  • Organopnictogen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Organonitrogen compound
  • Carbonyl group
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External DescriptorsNot Available
Ontology
Physiological effect
Disposition
Process
Role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling Point120.00 °C. @ 0.60 mm HgThe Good Scents Company Information System
Water Solubility0 slightlyThe Good Scents Company Information System
LogP2.454 (est)The Good Scents Company Information System
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.18 g/LALOGPS
logP3.25ALOGPS
logP2.55ChemAxon
logS-3ALOGPS
pKa (Strongest Acidic)16.55ChemAxon
pKa (Strongest Basic)1.77ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count1ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area29.1 ŲChemAxon
Rotatable Bond Count6ChemAxon
Refractivity58.55 m³·mol⁻¹ChemAxon
Polarizability22.08 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+143.73530932474
DeepCCS[M-H]-141.35230932474
DeepCCS[M-2H]-176.54230932474
DeepCCS[M+Na]+151.60130932474
AllCCS[M+H]+145.932859911
AllCCS[M+H-H2O]+142.032859911
AllCCS[M+NH4]+149.532859911
AllCCS[M+Na]+150.532859911
AllCCS[M-H]-148.032859911
AllCCS[M+Na-2H]-149.632859911
AllCCS[M+HCOO]-151.332859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
N-Ethyl trans-2-cis-6-nonadienamideCCNC(=O)\C=C\CC\C=C/CC2338.4Standard polar33892256
N-Ethyl trans-2-cis-6-nonadienamideCCNC(=O)\C=C\CC\C=C/CC1559.0Standard non polar33892256
N-Ethyl trans-2-cis-6-nonadienamideCCNC(=O)\C=C\CC\C=C/CC1620.8Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
N-Ethyl trans-2-cis-6-nonadienamide,1TMS,isomer #1CC/C=C\CC/C=C/C(=O)N(CC)[Si](C)(C)C1621.1Semi standard non polar33892256
N-Ethyl trans-2-cis-6-nonadienamide,1TMS,isomer #1CC/C=C\CC/C=C/C(=O)N(CC)[Si](C)(C)C1722.7Standard non polar33892256
N-Ethyl trans-2-cis-6-nonadienamide,1TBDMS,isomer #1CC/C=C\CC/C=C/C(=O)N(CC)[Si](C)(C)C(C)(C)C1826.0Semi standard non polar33892256
N-Ethyl trans-2-cis-6-nonadienamide,1TBDMS,isomer #1CC/C=C\CC/C=C/C(=O)N(CC)[Si](C)(C)C(C)(C)C1923.3Standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - N-Ethyl trans-2-cis-6-nonadienamide GC-MS (Non-derivatized) - 70eV, Positivesplash10-014r-8900000000-07b10223ef05be9cbcc42017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - N-Ethyl trans-2-cis-6-nonadienamide GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N-Ethyl trans-2-cis-6-nonadienamide 10V, Positive-QTOFsplash10-000x-9500000000-e414d91642d0ddf00ed52016-08-02Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N-Ethyl trans-2-cis-6-nonadienamide 20V, Positive-QTOFsplash10-0006-9100000000-99d1746cf9ed33e167602016-08-02Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N-Ethyl trans-2-cis-6-nonadienamide 40V, Positive-QTOFsplash10-0006-9000000000-aad631b50a26422cd5542016-08-02Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N-Ethyl trans-2-cis-6-nonadienamide 10V, Negative-QTOFsplash10-001i-1900000000-e7fc570f474d2cac27db2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N-Ethyl trans-2-cis-6-nonadienamide 20V, Negative-QTOFsplash10-0kal-3900000000-8cad3ab440d8deacfb452016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N-Ethyl trans-2-cis-6-nonadienamide 40V, Negative-QTOFsplash10-0006-9500000000-fa2600a42e1a4b66a0282016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N-Ethyl trans-2-cis-6-nonadienamide 10V, Negative-QTOFsplash10-001i-0900000000-a2c605dfa6ca7cd4c83a2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N-Ethyl trans-2-cis-6-nonadienamide 20V, Negative-QTOFsplash10-0a4i-0900000000-7c1a1a952be06a9bf2412021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N-Ethyl trans-2-cis-6-nonadienamide 40V, Negative-QTOFsplash10-0ldi-9200000000-a54fdab24157143f310a2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N-Ethyl trans-2-cis-6-nonadienamide 10V, Positive-QTOFsplash10-00l5-9300000000-f29a8f11f25cdd6780682021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N-Ethyl trans-2-cis-6-nonadienamide 20V, Positive-QTOFsplash10-05mn-9000000000-1eec24082ceb595941972021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N-Ethyl trans-2-cis-6-nonadienamide 40V, Positive-QTOFsplash10-0006-9000000000-d9778ed3088294ceab0e2021-09-24Wishart LabView Spectrum

IR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M-H]-)2023-02-04FELIX labView Spectrum
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+H]+)2023-02-04FELIX labView Spectrum
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+Na]+)2023-02-04FELIX labView Spectrum
Biological Properties
Cellular Locations
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB009402
KNApSAcK IDNot Available
Chemspider ID9484852
KEGG Compound IDC06551
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound11309884
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). EAFUS: Everything Added to Food in the United States.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.