You are using an unsupported browser. Please upgrade your browser to a newer version to get the best experience on Human Metabolome Database.

Jump To Section:

Identification Taxonomy Ontology Physical properties Spectra Biological properties Concentrations Links References XML

Record Information

Version

5.0

Status

Expected but not Quantified

Creation Date

2012-09-11 17:49:12 UTC

Update Date

2022-03-07 02:53:19 UTC

HMDB ID

HMDB0032328

Secondary Accession Numbers

HMDB32328

Metabolite Identification

Common Name

Hexyl nonanoate

Description

Hexyl nonanoate belongs to the class of organic compounds known as fatty acid esters. These are carboxylic ester derivatives of a fatty acid. Based on a literature review a significant number of articles have been published on Hexyl nonanoate.

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI

HMDB0032328
     RDKit          3D
Hexyl nonanoate
 47 46  0  0  0  0  0  0  0  0999 V2000
   -6.7864    1.2625   -1.6382 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9890    0.8253   -0.4383 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7472    0.1418   -0.9224 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8761   -0.3353    0.2417 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6757   -0.9963   -0.3859 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6952   -1.5301    0.6321 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1507   -0.4729    1.5271 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4141    0.6251    0.8080 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7703    0.0829    0.0817 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3670    0.8593   -0.7057 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1451   -1.2095    0.3045 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.2041   -1.8975   -0.2255 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5370   -1.5393    0.3278 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9593   -0.1388    0.1845 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3939    0.0190    0.7722 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7530    1.4699    0.5862 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7196    1.8040   -0.8899 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.4952    0.4785   -1.9828 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1106    1.5612   -2.4819 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.4231    2.1680   -1.4149 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5514    0.1167    0.1986 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7190    1.7100    0.1759 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0101   -0.7433   -1.5347 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1157    0.8437   -1.5082 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4473   -1.0751    0.8383 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6316    0.5212    0.8749 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0398   -1.8476   -0.9901 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1322   -0.3264   -1.0695 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2112   -2.3038    1.2778 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9365   -2.1076    0.0799 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3876   -0.9291    2.2269 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9030   -0.0062    2.1828 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0273    1.3972    1.5014 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1361    1.0787    0.0915 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2143   -1.7531   -1.3697 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0115   -3.0143   -0.1347 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5925   -1.7790    1.4396 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2985   -2.2640   -0.0905 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3725    0.5806    0.8155 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9504    0.1914   -0.8407 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3652   -0.3188    1.8119 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0355   -0.5907    0.1122 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.7685    1.6591    1.0092 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0579    2.1404    1.1264 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.5759    2.4424   -1.1804 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7514    2.3280   -1.1163 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7689    0.8716   -1.4724 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  2  0
  9 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  1  0
  1 18  1  0
  1 19  1  0
  1 20  1  0
  2 21  1  0
  2 22  1  0
  3 23  1  0
  3 24  1  0
  4 25  1  0
  4 26  1  0
  5 27  1  0
  5 28  1  0
  6 29  1  0
  6 30  1  0
  7 31  1  0
  7 32  1  0
  8 33  1  0
  8 34  1  0
 12 35  1  0
 12 36  1  0
 13 37  1  0
 13 38  1  0
 14 39  1  0
 14 40  1  0
 15 41  1  0
 15 42  1  0
 16 43  1  0
 16 44  1  0
 17 45  1  0
 17 46  1  0
 17 47  1  0
M  END


  Mrv0541 05061306282D          

 17 16  0  0  0  0            999 V2000
    3.1086   -2.1434    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.8256   -1.7309    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8230   -1.7309    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.1112   -2.1434    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5375   -2.1434    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.3967   -1.7309    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2520   -1.7309    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.6822   -2.1434    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9664   -2.1434    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6809   -1.7309    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.3954   -2.1434    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.9677   -1.7309    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.1099   -1.7309    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.2533   -2.1434    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.8243   -2.1434    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.8243   -2.9684    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.5388   -1.7309    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  3  1  1  0  0  0  0
  4  2  1  0  0  0  0
  5  3  1  0  0  0  0
  6  4  1  0  0  0  0
  7  5  1  0  0  0  0
  8  6  1  0  0  0  0
  9  7  1  0  0  0  0
 10  9  1  0  0  0  0
 11 10  1  0  0  0  0
 12  8  1  0  0  0  0
 13 11  1  0  0  0  0
 14 12  1  0  0  0  0
 15 13  1  0  0  0  0
 16 15  2  0  0  0  0
 17 14  1  0  0  0  0
 17 15  1  0  0  0  0
M  END
> <DATABASE_ID>
HMDB0032328

> <DATABASE_NAME>
hmdb

> <SMILES>
CCCCCCCCC(=O)OCCCCCC

> <INCHI_IDENTIFIER>
InChI=1S/C15H30O2/c1-3-5-7-9-10-11-13-15(16)17-14-12-8-6-4-2/h3-14H2,1-2H3

> <INCHI_KEY>
GPHBCFMWKGZPRP-UHFFFAOYSA-N

> <FORMULA>
C15H30O2

> <MOLECULAR_WEIGHT>
242.3975

> <EXACT_MASS>
242.224580204

> <JCHEM_ACCEPTOR_COUNT>
1

> <JCHEM_AVERAGE_POLARIZABILITY>
32.206257114944854

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
hexyl nonanoate

> <ALOGPS_LOGP>
6.09

> <JCHEM_LOGP>
5.503532523333334

> <ALOGPS_LOGS>
-5.67

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
0

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_BASIC>
-7.032727874416183

> <JCHEM_POLAR_SURFACE_AREA>
26.3

> <JCHEM_REFRACTIVITY>
72.72129999999999

> <JCHEM_ROTATABLE_BOND_COUNT>
13

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
5.20e-04 g/l

> <JCHEM_TRADITIONAL_IUPAC>
hexyl nonanoate

> <JCHEM_VEBER_RULE>
0

$$$$

HMDB0032328
     RDKit          3D
Hexyl nonanoate
 47 46  0  0  0  0  0  0  0  0999 V2000
   -6.7864    1.2625   -1.6382 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9890    0.8253   -0.4383 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7472    0.1418   -0.9224 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8761   -0.3353    0.2417 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6757   -0.9963   -0.3859 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6952   -1.5301    0.6321 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1507   -0.4729    1.5271 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4141    0.6251    0.8080 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7703    0.0829    0.0817 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3670    0.8593   -0.7057 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1451   -1.2095    0.3045 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.2041   -1.8975   -0.2255 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5370   -1.5393    0.3278 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9593   -0.1388    0.1845 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3939    0.0190    0.7722 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7530    1.4699    0.5862 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7196    1.8040   -0.8899 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.4952    0.4785   -1.9828 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1106    1.5612   -2.4819 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.4231    2.1680   -1.4149 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5514    0.1167    0.1986 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7190    1.7100    0.1759 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0101   -0.7433   -1.5347 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1157    0.8437   -1.5082 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4473   -1.0751    0.8383 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6316    0.5212    0.8749 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0398   -1.8476   -0.9901 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1322   -0.3264   -1.0695 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2112   -2.3038    1.2778 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9365   -2.1076    0.0799 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3876   -0.9291    2.2269 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9030   -0.0062    2.1828 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0273    1.3972    1.5014 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1361    1.0787    0.0915 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2143   -1.7531   -1.3697 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0115   -3.0143   -0.1347 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5925   -1.7790    1.4396 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2985   -2.2640   -0.0905 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3725    0.5806    0.8155 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9504    0.1914   -0.8407 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3652   -0.3188    1.8119 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0355   -0.5907    0.1122 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.7685    1.6591    1.0092 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0579    2.1404    1.1264 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.5759    2.4424   -1.1804 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7514    2.3280   -1.1163 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7689    0.8716   -1.4724 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  2  0
  9 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  1  0
  1 18  1  0
  1 19  1  0
  1 20  1  0
  2 21  1  0
  2 22  1  0
  3 23  1  0
  3 24  1  0
  4 25  1  0
  4 26  1  0
  5 27  1  0
  5 28  1  0
  6 29  1  0
  6 30  1  0
  7 31  1  0
  7 32  1  0
  8 33  1  0
  8 34  1  0
 12 35  1  0
 12 36  1  0
 13 37  1  0
 13 38  1  0
 14 39  1  0
 14 40  1  0
 15 41  1  0
 15 42  1  0
 16 43  1  0
 16 44  1  0
 17 45  1  0
 17 46  1  0
 17 47  1  0
M  END

HEADER    PROTEIN                                 06-MAY-13   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   06-MAY-13         0                                  
HETATM    1  C   UNK     0       5.803  -4.001   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      25.808  -3.231   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       7.136  -3.231   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      24.474  -4.001   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       8.470  -4.001   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      23.141  -3.231   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       9.804  -3.231   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      21.807  -4.001   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      11.137  -4.001   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      12.471  -3.231   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      13.805  -4.001   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      20.473  -3.231   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      15.138  -3.231   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      19.139  -4.001   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      16.472  -4.001   0.000  0.00  0.00           C+0
HETATM   16  O   UNK     0      16.472  -5.541   0.000  0.00  0.00           O+0
HETATM   17  O   UNK     0      17.806  -3.231   0.000  0.00  0.00           O+0
CONECT    1    3                                                            
CONECT    2    4                                                            
CONECT    3    1    5                                                       
CONECT    4    2    6                                                       
CONECT    5    3    7                                                       
CONECT    6    4    8                                                       
CONECT    7    5    9                                                       
CONECT    8    6   12                                                       
CONECT    9    7   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   13                                                       
CONECT   12    8   14                                                       
CONECT   13   11   15                                                       
CONECT   14   12   17                                                       
CONECT   15   13   16   17                                                  
CONECT   16   15                                                            
CONECT   17   14   15                                                       
MASTER        0    0    0    0    0    0    0    0   17    0   32    0
END

COMPND    HMDB0032328
HETATM    1  C1  UNL     1      -6.786   1.263  -1.638  1.00  0.00           C  
HETATM    2  C2  UNL     1      -5.989   0.825  -0.438  1.00  0.00           C  
HETATM    3  C3  UNL     1      -4.747   0.142  -0.922  1.00  0.00           C  
HETATM    4  C4  UNL     1      -3.876  -0.335   0.242  1.00  0.00           C  
HETATM    5  C5  UNL     1      -2.676  -0.996  -0.386  1.00  0.00           C  
HETATM    6  C6  UNL     1      -1.695  -1.530   0.632  1.00  0.00           C  
HETATM    7  C7  UNL     1      -1.151  -0.473   1.527  1.00  0.00           C  
HETATM    8  C8  UNL     1      -0.414   0.625   0.808  1.00  0.00           C  
HETATM    9  C9  UNL     1       0.770   0.083   0.082  1.00  0.00           C  
HETATM   10  O1  UNL     1       1.367   0.859  -0.706  1.00  0.00           O  
HETATM   11  O2  UNL     1       1.145  -1.209   0.305  1.00  0.00           O  
HETATM   12  C10 UNL     1       2.204  -1.897  -0.226  1.00  0.00           C  
HETATM   13  C11 UNL     1       3.537  -1.539   0.328  1.00  0.00           C  
HETATM   14  C12 UNL     1       3.959  -0.139   0.185  1.00  0.00           C  
HETATM   15  C13 UNL     1       5.394   0.019   0.772  1.00  0.00           C  
HETATM   16  C14 UNL     1       5.753   1.470   0.586  1.00  0.00           C  
HETATM   17  C15 UNL     1       5.720   1.804  -0.890  1.00  0.00           C  
HETATM   18  H1  UNL     1      -7.495   0.478  -1.983  1.00  0.00           H  
HETATM   19  H2  UNL     1      -6.111   1.561  -2.482  1.00  0.00           H  
HETATM   20  H3  UNL     1      -7.423   2.168  -1.415  1.00  0.00           H  
HETATM   21  H4  UNL     1      -6.551   0.117   0.199  1.00  0.00           H  
HETATM   22  H5  UNL     1      -5.719   1.710   0.176  1.00  0.00           H  
HETATM   23  H6  UNL     1      -5.010  -0.743  -1.535  1.00  0.00           H  
HETATM   24  H7  UNL     1      -4.116   0.844  -1.508  1.00  0.00           H  
HETATM   25  H8  UNL     1      -4.447  -1.075   0.838  1.00  0.00           H  
HETATM   26  H9  UNL     1      -3.632   0.521   0.875  1.00  0.00           H  
HETATM   27  H10 UNL     1      -3.040  -1.848  -0.990  1.00  0.00           H  
HETATM   28  H11 UNL     1      -2.132  -0.326  -1.069  1.00  0.00           H  
HETATM   29  H12 UNL     1      -2.211  -2.304   1.278  1.00  0.00           H  
HETATM   30  H13 UNL     1      -0.937  -2.108   0.080  1.00  0.00           H  
HETATM   31  H14 UNL     1      -0.388  -0.929   2.227  1.00  0.00           H  
HETATM   32  H15 UNL     1      -1.903  -0.006   2.183  1.00  0.00           H  
HETATM   33  H16 UNL     1      -0.027   1.397   1.501  1.00  0.00           H  
HETATM   34  H17 UNL     1      -1.136   1.079   0.091  1.00  0.00           H  
HETATM   35  H18 UNL     1       2.214  -1.753  -1.370  1.00  0.00           H  
HETATM   36  H19 UNL     1       2.011  -3.014  -0.135  1.00  0.00           H  
HETATM   37  H20 UNL     1       3.592  -1.779   1.440  1.00  0.00           H  
HETATM   38  H21 UNL     1       4.298  -2.264  -0.091  1.00  0.00           H  
HETATM   39  H22 UNL     1       3.373   0.581   0.816  1.00  0.00           H  
HETATM   40  H23 UNL     1       3.950   0.191  -0.841  1.00  0.00           H  
HETATM   41  H24 UNL     1       5.365  -0.319   1.812  1.00  0.00           H  
HETATM   42  H25 UNL     1       6.036  -0.591   0.112  1.00  0.00           H  
HETATM   43  H26 UNL     1       6.769   1.659   1.009  1.00  0.00           H  
HETATM   44  H27 UNL     1       5.058   2.140   1.126  1.00  0.00           H  
HETATM   45  H28 UNL     1       6.576   2.442  -1.180  1.00  0.00           H  
HETATM   46  H29 UNL     1       4.751   2.328  -1.116  1.00  0.00           H  
HETATM   47  H30 UNL     1       5.769   0.872  -1.472  1.00  0.00           H  
CONECT    1    2   18   19   20
CONECT    2    3   21   22
CONECT    3    4   23   24
CONECT    4    5   25   26
CONECT    5    6   27   28
CONECT    6    7   29   30
CONECT    7    8   31   32
CONECT    8    9   33   34
CONECT    9   10   10   11
CONECT   11   12
CONECT   12   13   35   36
CONECT   13   14   37   38
CONECT   14   15   39   40
CONECT   15   16   41   42
CONECT   16   17   43   44
CONECT   17   45   46   47
END

HMDB0032328
     RDKit          3D
Hexyl nonanoate
 47 46  0  0  0  0  0  0  0  0999 V2000
   -6.7864    1.2625   -1.6382 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9890    0.8253   -0.4383 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7472    0.1418   -0.9224 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8761   -0.3353    0.2417 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6757   -0.9963   -0.3859 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6952   -1.5301    0.6321 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1507   -0.4729    1.5271 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4141    0.6251    0.8080 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7703    0.0829    0.0817 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3670    0.8593   -0.7057 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1451   -1.2095    0.3045 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.2041   -1.8975   -0.2255 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5370   -1.5393    0.3278 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9593   -0.1388    0.1845 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3939    0.0190    0.7722 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7530    1.4699    0.5862 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7196    1.8040   -0.8899 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.4952    0.4785   -1.9828 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1106    1.5612   -2.4819 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.4231    2.1680   -1.4149 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5514    0.1167    0.1986 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7190    1.7100    0.1759 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0101   -0.7433   -1.5347 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1157    0.8437   -1.5082 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4473   -1.0751    0.8383 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6316    0.5212    0.8749 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0398   -1.8476   -0.9901 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1322   -0.3264   -1.0695 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2112   -2.3038    1.2778 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9365   -2.1076    0.0799 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3876   -0.9291    2.2269 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9030   -0.0062    2.1828 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0273    1.3972    1.5014 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1361    1.0787    0.0915 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2143   -1.7531   -1.3697 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0115   -3.0143   -0.1347 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5925   -1.7790    1.4396 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2985   -2.2640   -0.0905 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3725    0.5806    0.8155 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9504    0.1914   -0.8407 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3652   -0.3188    1.8119 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0355   -0.5907    0.1122 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.7685    1.6591    1.0092 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0579    2.1404    1.1264 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.5759    2.4424   -1.1804 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7514    2.3280   -1.1163 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7689    0.8716   -1.4724 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  2  0
  9 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  1  0
  1 18  1  0
  1 19  1  0
  1 20  1  0
  2 21  1  0
  2 22  1  0
  3 23  1  0
  3 24  1  0
  4 25  1  0
  4 26  1  0
  5 27  1  0
  5 28  1  0
  6 29  1  0
  6 30  1  0
  7 31  1  0
  7 32  1  0
  8 33  1  0
  8 34  1  0
 12 35  1  0
 12 36  1  0
 13 37  1  0
 13 38  1  0
 14 39  1  0
 14 40  1  0
 15 41  1  0
 15 42  1  0
 16 43  1  0
 16 44  1  0
 17 45  1  0
 17 46  1  0
 17 47  1  0
M  END

View in JSmol View Stereo Labels

Synonyms

Value	Source
Hexyl nonanoic acid	Generator
Hexyl nonan-1-Oate	HMDB
Hexyl pelargonate	HMDB

Chemical Formula

C₁₅H₃₀O₂

Average Molecular Weight

242.3975

Monoisotopic Molecular Weight

242.224580204

IUPAC Name

hexyl nonanoate

Traditional Name

hexyl nonanoate

CAS Registry Number

6561-39-3

SMILES

CCCCCCCCC(=O)OCCCCCC

InChI Identifier

InChI=1S/C15H30O2/c1-3-5-7-9-10-11-13-15(16)17-14-12-8-6-4-2/h3-14H2,1-2H3

InChI Key

GPHBCFMWKGZPRP-UHFFFAOYSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as fatty acid esters. These are carboxylic ester derivatives of a fatty acid.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Fatty Acyls

Sub Class

Fatty acid esters

Direct Parent

Fatty acid esters

Alternative Parents

Substituents

Fatty acid ester
Carboxylic acid ester
Monocarboxylic acid or derivatives
Carboxylic acid derivative
Organic oxygen compound
Organic oxide
Hydrocarbon derivative
Organooxygen compound
Carbonyl group
Aliphatic acyclic compound

Molecular Framework

Aliphatic acyclic compounds

External Descriptors

Not Available

Ontology

Cytoplasm (HMDB: HMDB0032328)
Cell membrane (HMDB: HMDB0032328)

Biofluid or Excreta

Urine (HMDB: HMDB0032328)

Cellular substructure

Extracellular (HMDB: HMDB0032328)
Membrane (HMDB: HMDB0032328)

Route of exposure

Enteral

Ingestion (HMDB: HMDB0032328)

Source

Endogenous

Endogenous (HMDB: HMDB0032328)

Animal

Animal (HMDB: HMDB0032328)

Exogenous

Food

Food (HMDB: HMDB0032328)

Process

Naturally occurring process

Biological process

Chemical reaction

Lipid peroxidation (HMDB: HMDB0032328)

Biochemical process

Fatty acid metabolism (HMDB: HMDB0032328)

Cellular process

Cell signaling (HMDB: HMDB0032328)

Biochemical pathway

Lipid metabolism pathway (HMDB: HMDB0032328)

Role

Biological role

Membrane stabilizer (HMDB: HMDB0032328)

Nutrient

Nutrient (HMDB: HMDB0032328)

Industrial application

Manufacturing industry

Material processing agent

Fluid processing agent

Surfactant

Surfactant (HMDB: HMDB0032328)

Emulsifier (HMDB: HMDB0032328)

Physical Properties

State

Not Available

Experimental Molecular Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	291.00 to 292.00 °C. @ 760.00 mm Hg	The Good Scents Company Information System
Water Solubility	0.16 mg/L @ 25 °C (est)	The Good Scents Company Information System
LogP	6.390 (est)	The Good Scents Company Information System

Experimental Chromatographic Properties

Not Available

Predicted Molecular Properties

Property	Value	Source
Water Solubility	0.00052 g/L	ALOGPS
logP	6.09	ALOGPS
logP	5.5	ChemAxon
logS	-5.7	ALOGPS
pKa (Strongest Basic)	-7	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	1	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	26.3 Å²	ChemAxon
Rotatable Bond Count	13	ChemAxon
Refractivity	72.72 m³·mol⁻¹	ChemAxon
Polarizability	32.21 Å³	ChemAxon
Number of Rings	0	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Predicted Chromatographic Properties

Predicted Collision Cross Sections

Predictor	Adduct Type	CCS Value (Å²)	Reference
DarkChem	[M+H]+	162.405	31661259
DarkChem	[M-H]-	161.45	31661259
DeepCCS	[M+H]+	165.62	30932474
DeepCCS	[M-H]-	162.765	30932474
DeepCCS	[M-2H]-	199.11	30932474
DeepCCS	[M+Na]+	174.774	30932474
AllCCS	[M+H]+	167.7	32859911
AllCCS	[M+H-H2O]+	164.6	32859911
AllCCS	[M+NH4]+	170.6	32859911
AllCCS	[M+Na]+	171.4	32859911
AllCCS	[M-H]-	167.1	32859911
AllCCS	[M+Na-2H]-	168.3	32859911
AllCCS	[M+HCOO]-	169.8	32859911

Predicted Kovats Retention Indices

Underivatized

Metabolite	SMILES	Kovats RI Value	Column Type	Reference
Hexyl nonanoate	CCCCCCCCC(=O)OCCCCCC	1939.8	Standard polar	33892256
Hexyl nonanoate	CCCCCCCCC(=O)OCCCCCC	1651.9	Standard non polar	33892256
Hexyl nonanoate	CCCCCCCCC(=O)OCCCCCC	1700.7	Semi standard non polar	33892256

Spectra

GC-MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Experimental GC-MS	GC-MS Spectrum - Hexyl nonanoate EI-B (Non-derivatized)	splash10-0a4l-9200000000-060881b784558ff6aba0	2017-09-12	HMDB team, MONA, MassBank	View Spectrum
Experimental GC-MS	GC-MS Spectrum - Hexyl nonanoate EI-B (Non-derivatized)	splash10-0a4l-9200000000-060881b784558ff6aba0	2018-05-18	HMDB team, MONA, MassBank	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - Hexyl nonanoate GC-MS (Non-derivatized) - 70eV, Positive	splash10-01pc-9810000000-59e60b6829979bd50cfb	2017-09-01	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - Hexyl nonanoate GC-MS (Non-derivatized) - 70eV, Positive	Not Available	2021-10-12	Wishart Lab	View Spectrum

MS/MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Hexyl nonanoate 10V, Positive-QTOF	splash10-0006-1490000000-fc65300989c61b2db983	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Hexyl nonanoate 20V, Positive-QTOF	splash10-0006-6920000000-6219ff7b54229354d23f	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Hexyl nonanoate 40V, Positive-QTOF	splash10-052f-9100000000-2c2c317ff51da516a992	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Hexyl nonanoate 10V, Negative-QTOF	splash10-000f-0980000000-ee89b69b7aa0127e2d07	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Hexyl nonanoate 20V, Negative-QTOF	splash10-0a4r-0910000000-e86228e775570e4bbdae	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Hexyl nonanoate 40V, Negative-QTOF	splash10-0btl-9800000000-00bfd957aa7d7c44f57f	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Hexyl nonanoate 10V, Positive-QTOF	splash10-0006-5690000000-008eca37dc86eaf51de4	2021-09-21	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Hexyl nonanoate 20V, Positive-QTOF	splash10-000i-9200000000-1b48efbb156ef534e727	2021-09-21	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Hexyl nonanoate 40V, Positive-QTOF	splash10-052f-9000000000-93d1bb5c0a80eca9ee54	2021-09-21	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Hexyl nonanoate 10V, Negative-QTOF	splash10-0006-0290000000-58aa46d61bb41b4e9d23	2021-09-25	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Hexyl nonanoate 20V, Negative-QTOF	splash10-0006-2890000000-6bb075cf2ab1cf3b376b	2021-09-25	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Hexyl nonanoate 40V, Negative-QTOF	splash10-0pdj-5900000000-00560a8f52cff2c6365e	2021-09-25	Wishart Lab	View Spectrum

Biological Properties

Cellular Locations

Extracellular
Membrane

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Pathways

Not Available

Name	SMPDB/PathBank	KEGG

Normal Concentrations

Not Available

Abnormal Concentrations

Not Available

Associated Disorders and Diseases

Disease References

None

Associated OMIM IDs

None

External Links

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

FDB009581

KNApSAcK ID

Not Available

Chemspider ID

73118

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

81045

PDB ID

Not Available

ChEBI ID

32361

Food Biomarker Ontology

Not Available

VMH ID

Not Available

MarkerDB ID

Not Available

Good Scents ID

rw1027101

References

Synthesis Reference

Not Available

Material Safety Data Sheet (MSDS)

Not Available

General References

Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
(). EAFUS: Everything Added to Food in the United States.. .
Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.

Showing metabocard for Hexyl nonanoate (HMDB0032328)

MOL for HMDB0032328 (Hexyl nonanoate)

3D MOL for HMDB0032328 (Hexyl nonanoate)

3D SDF for HMDB0032328 (Hexyl nonanoate)

3D-SDF for HMDB0032328 (Hexyl nonanoate)

PDB for HMDB0032328 (Hexyl nonanoate)

3D PDB for HMDB0032328 (Hexyl nonanoate)

SMILES for HMDB0032328 (Hexyl nonanoate)

INCHI for HMDB0032328 (Hexyl nonanoate)

Structure for HMDB0032328 (Hexyl nonanoate)

3D Structure for HMDB0032328 (Hexyl nonanoate)

Predicted Collision Cross Sections

Predicted Kovats Retention Indices

Underivatized

GC-MS Spectra

MS/MS Spectra