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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:53:22 UTC
Update Date2022-03-07 02:53:34 UTC
HMDB IDHMDB0033032
Secondary Accession Numbers
  • HMDB33032
Metabolite Identification
Common NameThalicpureine
DescriptionThalicpureine belongs to the class of organic compounds known as 6,6a-secoaporphines. These are alkaloids with a structure that contains an aminoethylphenanthrene moiety. Thalicpureine has been detected, but not quantified in, beverages and fruits. This could make thalicpureine a potential biomarker for the consumption of these foods. Thalicpureine is a secondary metabolite. Secondary metabolites are metabolically or physiologically non-essential metabolites that may serve a role as defense or signalling molecules. In some cases they are simply molecules that arise from the incomplete metabolism of other secondary metabolites. Based on a literature review a significant number of articles have been published on Thalicpureine.
Structure
Data?1563862342
Synonyms
ValueSource
Methyl[2-(2,3,4,6,7-pentamethoxyphenanthren-1-yl)ethyl]amineChEBI
2,3,4,6,7-Pentamethoxy-1-(2-methylaminoethyl)phenanthreneHMDB
2,3,4,6,7-Pentamethoxy-N-methyl-1-phenanthrenemethanamine, 9ciHMDB
Chemical FormulaC22H27NO5
Average Molecular Weight385.4535
Monoisotopic Molecular Weight385.188922979
IUPAC Namemethyl[2-(2,3,4,6,7-pentamethoxyphenanthren-1-yl)ethyl]amine
Traditional Namemethyl[2-(2,3,4,6,7-pentamethoxyphenanthren-1-yl)ethyl]amine
CAS Registry Number218900-91-5
SMILES
CNCCC1=C(OC)C(OC)=C(OC)C2=C1C=CC1=C2C=C(OC)C(OC)=C1
InChI Identifier
InChI=1S/C22H27NO5/c1-23-10-9-15-14-8-7-13-11-17(24-2)18(25-3)12-16(13)19(14)21(27-5)22(28-6)20(15)26-4/h7-8,11-12,23H,9-10H2,1-6H3
InChI KeyVMIFHEUVQQHIOK-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as 6,6a-secoaporphines. These are alkaloids with a structure that contains an aminoethylphenanthrene moiety.
KingdomOrganic compounds
Super ClassAlkaloids and derivatives
Class6,6a-secoaporphines
Sub ClassNot Available
Direct Parent6,6a-secoaporphines
Alternative Parents
Substituents
  • 6,6a-secoaporphine
  • Phenanthrene
  • Naphthalene
  • Phenethylamine
  • Anisole
  • Alkyl aryl ether
  • Aralkylamine
  • Benzenoid
  • Ether
  • Secondary aliphatic amine
  • Secondary amine
  • Organic nitrogen compound
  • Hydrocarbon derivative
  • Organooxygen compound
  • Organonitrogen compound
  • Organopnictogen compound
  • Organic oxygen compound
  • Amine
  • Aromatic homopolycyclic compound
Molecular FrameworkAromatic homopolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
Role
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point196 - 197 °CNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.0051 g/LALOGPS
logP3.58ALOGPS
logP3.01ChemAxon
logS-4.9ALOGPS
pKa (Strongest Basic)10.02ChemAxon
Physiological Charge1ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area58.18 ŲChemAxon
Rotatable Bond Count8ChemAxon
Refractivity109.28 m³·mol⁻¹ChemAxon
Polarizability43.14 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+191.65431661259
DarkChem[M-H]-192.66531661259
DeepCCS[M+H]+194.59430932474
DeepCCS[M-H]-192.11430932474
DeepCCS[M-2H]-226.52730932474
DeepCCS[M+Na]+201.91830932474
AllCCS[M+H]+192.832859911
AllCCS[M+H-H2O]+190.032859911
AllCCS[M+NH4]+195.432859911
AllCCS[M+Na]+196.132859911
AllCCS[M-H]-200.732859911
AllCCS[M+Na-2H]-201.032859911
AllCCS[M+HCOO]-201.432859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
ThalicpureineCNCCC1=C(OC)C(OC)=C(OC)C2=C1C=CC1=C2C=C(OC)C(OC)=C14129.5Standard polar33892256
ThalicpureineCNCCC1=C(OC)C(OC)=C(OC)C2=C1C=CC1=C2C=C(OC)C(OC)=C12971.2Standard non polar33892256
ThalicpureineCNCCC1=C(OC)C(OC)=C(OC)C2=C1C=CC1=C2C=C(OC)C(OC)=C13140.5Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Thalicpureine,1TMS,isomer #1COC1=CC2=CC=C3C(CCN(C)[Si](C)(C)C)=C(OC)C(OC)=C(OC)C3=C2C=C1OC3064.1Semi standard non polar33892256
Thalicpureine,1TMS,isomer #1COC1=CC2=CC=C3C(CCN(C)[Si](C)(C)C)=C(OC)C(OC)=C(OC)C3=C2C=C1OC3216.9Standard non polar33892256
Thalicpureine,1TBDMS,isomer #1COC1=CC2=CC=C3C(CCN(C)[Si](C)(C)C(C)(C)C)=C(OC)C(OC)=C(OC)C3=C2C=C1OC3252.0Semi standard non polar33892256
Thalicpureine,1TBDMS,isomer #1COC1=CC2=CC=C3C(CCN(C)[Si](C)(C)C(C)(C)C)=C(OC)C(OC)=C(OC)C3=C2C=C1OC3398.5Standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Thalicpureine GC-MS (Non-derivatized) - 70eV, Positivesplash10-0006-9007000000-d9c5df17b512fe18037d2017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Thalicpureine GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Thalicpureine 10V, Positive-QTOFsplash10-000i-0009000000-87103a8f5035e8450ed62016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Thalicpureine 20V, Positive-QTOFsplash10-0a4r-1009000000-9b6e7119db6a85dd724b2016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Thalicpureine 40V, Positive-QTOFsplash10-014i-2097000000-9e72a9ae19b846bc04a22016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Thalicpureine 10V, Negative-QTOFsplash10-001i-0009000000-b1742f327eed3d40174c2016-08-04Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Thalicpureine 20V, Negative-QTOFsplash10-00lr-0009000000-9b4ad1971cb7d64a9b6a2016-08-04Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Thalicpureine 40V, Negative-QTOFsplash10-001u-0092000000-572e8d986fda9ff8e6832016-08-04Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Thalicpureine 10V, Negative-QTOFsplash10-001i-0009000000-583d928efffb1e6fd5fb2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Thalicpureine 20V, Negative-QTOFsplash10-0ff9-0009000000-aa7154bf5407ad4637232021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Thalicpureine 40V, Negative-QTOFsplash10-000i-0049000000-6a0ba99249fa2fb1eb412021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Thalicpureine 10V, Positive-QTOFsplash10-0a4r-0009000000-95ecce977dd133a2cb822021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Thalicpureine 20V, Positive-QTOFsplash10-0a4i-0009000000-e8238f32fa08656af6bc2021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Thalicpureine 40V, Positive-QTOFsplash10-03fr-0049000000-0c08ab14a9d198cb91c22021-09-25Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB011024
KNApSAcK IDC00050253
Chemspider ID8605618
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound10430190
PDB IDNot Available
ChEBI ID143869
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .