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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:58:02 UTC
Update Date2022-03-07 02:53:38 UTC
HMDB IDHMDB0033254
Secondary Accession Numbers
  • HMDB33254
Metabolite Identification
Common NameComosin
DescriptionComosin belongs to the class of organic compounds known as 3'-hydroxy,4'-methoxyisoflavonoids. These are isoflavonoids carrying a methoxy group attached to the C4' atom, as well as a hydroxyl group at the C3'-position of the isoflavonoid backbone. Comosin has been detected, but not quantified in, herbs and spices. This could make comosin a potential biomarker for the consumption of these foods. Based on a literature review very few articles have been published on Comosin.
Structure
Data?1563862376
Synonyms
ValueSource
3-[(Acetyloxy)methyl]-2,3-dihydro-5,7-dihydroxy-3-(3-hydroxy-4-methoxyphenyl)-4H-1-benzopyran-4-one, 9ciHMDB
[5,7-Dihydroxy-3-(3-hydroxy-4-methoxyphenyl)-4-oxo-3,4-dihydro-2H-1-benzopyran-3-yl]methyl acetic acidGenerator
Chemical FormulaC19H18O8
Average Molecular Weight374.3414
Monoisotopic Molecular Weight374.100167552
IUPAC Name[5,7-dihydroxy-3-(3-hydroxy-4-methoxyphenyl)-4-oxo-3,4-dihydro-2H-1-benzopyran-3-yl]methyl acetate
Traditional Name[5,7-dihydroxy-3-(3-hydroxy-4-methoxyphenyl)-4-oxo-2H-1-benzopyran-3-yl]methyl acetate
CAS Registry Number99877-69-7
SMILES
COC1=C(O)C=C(C=C1)C1(COC(C)=O)COC2=CC(O)=CC(O)=C2C1=O
InChI Identifier
InChI=1S/C19H18O8/c1-10(20)26-8-19(11-3-4-15(25-2)13(22)5-11)9-27-16-7-12(21)6-14(23)17(16)18(19)24/h3-7,21-23H,8-9H2,1-2H3
InChI KeyIOLHWMMZYCBLRD-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as 3'-hydroxy,4'-methoxyisoflavonoids. These are isoflavonoids carrying a methoxy group attached to the C4' atom, as well as a hydroxyl group at the C3'-position of the isoflavonoid backbone.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassIsoflavonoids
Sub ClassO-methylated isoflavonoids
Direct Parent3'-hydroxy,4'-methoxyisoflavonoids
Alternative Parents
Substituents
  • 3'-hydroxy,4'-methoxyisoflavonoid
  • Isoflavanol
  • Isoflavanone
  • Hydroxyisoflavonoid
  • Isoflavan
  • Chromone
  • Chromane
  • Benzopyran
  • Methoxyphenol
  • 1-benzopyran
  • Anisole
  • Phenoxy compound
  • Phenol ether
  • Methoxybenzene
  • Aryl ketone
  • Aryl alkyl ketone
  • Phenol
  • 1-hydroxy-4-unsubstituted benzenoid
  • Alkyl aryl ether
  • 1-hydroxy-2-unsubstituted benzenoid
  • Benzenoid
  • Monocyclic benzene moiety
  • Vinylogous acid
  • Ketone
  • Carboxylic acid ester
  • Monocarboxylic acid or derivatives
  • Oxacycle
  • Organoheterocyclic compound
  • Carboxylic acid derivative
  • Ether
  • Hydrocarbon derivative
  • Carbonyl group
  • Organooxygen compound
  • Organic oxide
  • Organic oxygen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
Role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water Solubility140.4 mg/L @ 25 °C (est)The Good Scents Company Information System
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.066 g/LALOGPS
logP2.56ALOGPS
logP2.29ChemAxon
logS-3.8ALOGPS
pKa (Strongest Acidic)7.88ChemAxon
pKa (Strongest Basic)-3.9ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count7ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area122.52 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity93.57 m³·mol⁻¹ChemAxon
Polarizability36.63 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+187.40131661259
DarkChem[M-H]-186.31231661259
DeepCCS[M+H]+184.84930932474
DeepCCS[M-H]-182.49130932474
DeepCCS[M-2H]-216.63830932474
DeepCCS[M+Na]+192.4930932474
AllCCS[M+H]+185.832859911
AllCCS[M+H-H2O]+182.832859911
AllCCS[M+NH4]+188.532859911
AllCCS[M+Na]+189.332859911
AllCCS[M-H]-188.132859911
AllCCS[M+Na-2H]-188.032859911
AllCCS[M+HCOO]-188.032859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
ComosinCOC1=C(O)C=C(C=C1)C1(COC(C)=O)COC2=CC(O)=CC(O)=C2C1=O4732.7Standard polar33892256
ComosinCOC1=C(O)C=C(C=C1)C1(COC(C)=O)COC2=CC(O)=CC(O)=C2C1=O3081.9Standard non polar33892256
ComosinCOC1=C(O)C=C(C=C1)C1(COC(C)=O)COC2=CC(O)=CC(O)=C2C1=O3324.5Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Comosin,1TMS,isomer #1COC1=CC=C(C2(COC(C)=O)COC3=CC(O)=CC(O)=C3C2=O)C=C1O[Si](C)(C)C3048.6Semi standard non polar33892256
Comosin,1TMS,isomer #2COC1=CC=C(C2(COC(C)=O)COC3=CC(O[Si](C)(C)C)=CC(O)=C3C2=O)C=C1O3053.8Semi standard non polar33892256
Comosin,1TMS,isomer #3COC1=CC=C(C2(COC(C)=O)COC3=CC(O)=CC(O[Si](C)(C)C)=C3C2=O)C=C1O3081.3Semi standard non polar33892256
Comosin,2TMS,isomer #1COC1=CC=C(C2(COC(C)=O)COC3=CC(O[Si](C)(C)C)=CC(O)=C3C2=O)C=C1O[Si](C)(C)C2996.0Semi standard non polar33892256
Comosin,2TMS,isomer #2COC1=CC=C(C2(COC(C)=O)COC3=CC(O)=CC(O[Si](C)(C)C)=C3C2=O)C=C1O[Si](C)(C)C3034.9Semi standard non polar33892256
Comosin,2TMS,isomer #3COC1=CC=C(C2(COC(C)=O)COC3=CC(O[Si](C)(C)C)=CC(O[Si](C)(C)C)=C3C2=O)C=C1O3017.7Semi standard non polar33892256
Comosin,3TMS,isomer #1COC1=CC=C(C2(COC(C)=O)COC3=CC(O[Si](C)(C)C)=CC(O[Si](C)(C)C)=C3C2=O)C=C1O[Si](C)(C)C3019.4Semi standard non polar33892256
Comosin,1TBDMS,isomer #1COC1=CC=C(C2(COC(C)=O)COC3=CC(O)=CC(O)=C3C2=O)C=C1O[Si](C)(C)C(C)(C)C3303.7Semi standard non polar33892256
Comosin,1TBDMS,isomer #2COC1=CC=C(C2(COC(C)=O)COC3=CC(O[Si](C)(C)C(C)(C)C)=CC(O)=C3C2=O)C=C1O3302.5Semi standard non polar33892256
Comosin,1TBDMS,isomer #3COC1=CC=C(C2(COC(C)=O)COC3=CC(O)=CC(O[Si](C)(C)C(C)(C)C)=C3C2=O)C=C1O3326.4Semi standard non polar33892256
Comosin,2TBDMS,isomer #1COC1=CC=C(C2(COC(C)=O)COC3=CC(O[Si](C)(C)C(C)(C)C)=CC(O)=C3C2=O)C=C1O[Si](C)(C)C(C)(C)C3470.1Semi standard non polar33892256
Comosin,2TBDMS,isomer #2COC1=CC=C(C2(COC(C)=O)COC3=CC(O)=CC(O[Si](C)(C)C(C)(C)C)=C3C2=O)C=C1O[Si](C)(C)C(C)(C)C3499.5Semi standard non polar33892256
Comosin,2TBDMS,isomer #3COC1=CC=C(C2(COC(C)=O)COC3=CC(O[Si](C)(C)C(C)(C)C)=CC(O[Si](C)(C)C(C)(C)C)=C3C2=O)C=C1O3486.3Semi standard non polar33892256
Comosin,3TBDMS,isomer #1COC1=CC=C(C2(COC(C)=O)COC3=CC(O[Si](C)(C)C(C)(C)C)=CC(O[Si](C)(C)C(C)(C)C)=C3C2=O)C=C1O[Si](C)(C)C(C)(C)C3654.7Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Comosin GC-MS (Non-derivatized) - 70eV, Positivesplash10-006x-9407000000-e6875fc47877ce073b122017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Comosin GC-MS (3 TMS) - 70eV, Positivesplash10-00mo-7240090000-8d09136010950bbf29962017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Comosin GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Comosin 10V, Positive-QTOFsplash10-004i-0009000000-09e02ecb4276d8c15db22016-08-02Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Comosin 20V, Positive-QTOFsplash10-0fb9-0719000000-413de110ce15330ec29d2016-08-02Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Comosin 40V, Positive-QTOFsplash10-0udl-4911000000-8679bc7c6e4c823f917d2016-08-02Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Comosin 10V, Negative-QTOFsplash10-00di-2019000000-2e44c80e01759f5024ab2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Comosin 20V, Negative-QTOFsplash10-0fkc-4459000000-1f3065a56c3f28d6634f2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Comosin 40V, Negative-QTOFsplash10-0f6x-9522000000-b382bc47fd8b24d850042016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Comosin 10V, Negative-QTOFsplash10-0udi-0019000000-3563874681b5f45c47ce2021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Comosin 20V, Negative-QTOFsplash10-0zg1-2493000000-740985bf12ca7b3c9d712021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Comosin 40V, Negative-QTOFsplash10-0a4i-9381000000-94f5972466513ce2b9232021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Comosin 10V, Positive-QTOFsplash10-004i-0009000000-ced863fc8f33a27a3b822021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Comosin 20V, Positive-QTOFsplash10-0f76-0913000000-c291464e20fe6c7a2ee32021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Comosin 40V, Positive-QTOFsplash10-0pdm-4971000000-ecbe6bd2f338fcc3dbbd2021-09-25Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB011276
KNApSAcK IDC00053925
Chemspider ID10290019
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound21676269
PDB IDNot Available
ChEBI ID175798
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1834211
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .

Enzymes

General function:
Involved in transferase activity, transferring hexosyl groups
Specific function:
UDPGT is of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds. This isoform glucuronidates bilirubin IX-alpha to form both the IX-alpha-C8 and IX-alpha-C12 monoconjugates and diconjugate. Is also able to catalyze the glucuronidation of 17beta-estradiol, 17alpha-ethinylestradiol, 1-hydroxypyrene, 4-methylumbelliferone, 1-naphthol, paranitrophenol, scopoletin, and umbelliferone.
Gene Name:
UGT1A1
Uniprot ID:
P22309
Molecular weight:
59590.91
Reactions
Comosin → 6-({3-[(acetyloxy)methyl]-7-hydroxy-3-(3-hydroxy-4-methoxyphenyl)-4-oxo-3,4-dihydro-2H-1-benzopyran-5-yl}oxy)-3,4,5-trihydroxyoxane-2-carboxylic aciddetails
Comosin → 6-({3-[(acetyloxy)methyl]-5-hydroxy-3-(3-hydroxy-4-methoxyphenyl)-4-oxo-3,4-dihydro-2H-1-benzopyran-7-yl}oxy)-3,4,5-trihydroxyoxane-2-carboxylic aciddetails
Comosin → 6-(5-{3-[(acetyloxy)methyl]-5,7-dihydroxy-4-oxo-3,4-dihydro-2H-1-benzopyran-3-yl}-2-methoxyphenoxy)-3,4,5-trihydroxyoxane-2-carboxylic aciddetails
General function:
Lipid transport and metabolism
Specific function:
Involved in the detoxification of xenobiotics and in the activation of ester and amide prodrugs. Hydrolyzes aromatic and aliphatic esters, but has no catalytic activity toward amides or a fatty acyl-CoA ester. Hydrolyzes the methyl ester group of cocaine to form benzoylecgonine. Catalyzes the transesterification of cocaine to form cocaethylene. Displays fatty acid ethyl ester synthase activity, catalyzing the ethyl esterification of oleic acid to ethyloleate.
Gene Name:
CES1
Uniprot ID:
P23141
Molecular weight:
62520.62
Reactions
Comosin → 5,7-dihydroxy-3-(3-hydroxy-4-methoxyphenyl)-3-(hydroxymethyl)-3,4-dihydro-2H-1-benzopyran-4-onedetails
General function:
sulfotransferase activity
Specific function:
Sulfotransferase that utilizes 3'-phospho-5'-adenylyl sulfate (PAPS) as sulfonate donor to catalyze the sulfate conjugation of phenolic monoamines (neurotransmitters such as dopamine, norepinephrine and serotonin) and phenolic and catechol drugs.
Gene Name:
SULT1A3
Uniprot ID:
P0DMM9
Molecular weight:
34195.96
Reactions
Comosin → (5-{3-[(acetyloxy)methyl]-5,7-dihydroxy-4-oxo-3,4-dihydro-2H-1-benzopyran-3-yl}-2-methoxyphenyl)oxidanesulfonic aciddetails