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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 18:05:37 UTC
Update Date2023-02-21 17:23:17 UTC
HMDB IDHMDB0033377
Secondary Accession Numbers
  • HMDB33377
Metabolite Identification
Common Namecis-3-Hexenyl butyrate
Descriptioncis-3-Hexenyl butyrate is found in citrus. cis-3-Hexenyl butyrate is a constituent of aroma from Ceylon tea. Also present in orange peel oil, lovage root and many fruits, e.g. feijoa fruit, nectarine, strawberry, guava, Chinese quince. cis-3-Hexenyl butyrate is a flavouring ingredient.
Structure
Data?1677000197
Synonyms
ValueSource
cis-3-Hexenyl butyric acidGenerator
(3Z)-3-Hexenyl butyrateHMDB
(Z)-3-Hexen-1-ol, butanoateHMDB
(Z)-3-Hexen-1-yl butanoateHMDB
(Z)-3-Hexenyl butanoateHMDB
(Z)-3-Hexenyl butyrateHMDB
(Z)-Hex-3-enyl butanoateHMDB
(Z)-Hex-3-enyl butyrateHMDB
3(Z)-Hexenyl butanoateHMDB
3-Hexenyl butyrateHMDB
3-Hexenyl ester(Z)-butanoic acidHMDB
3-Hexenyl ester(Z)-butyric acidHMDB
beta,gamma-Hexenyl butyrateHMDB
Butanoate(Z)-3-hexen-1-olHMDB
Butanoic acid, (3Z)-3-hexen-1-yl esterHMDB
Butanoic acid, (3Z)-3-hexenyl esterHMDB
Butanoic acid, (Z)-3-hexenyl esterHMDB
cis-3-Hexen-1-yl butyrateHMDB
cis-3-Hexenyl butanoateHMDB
cis-3-Hexenyl N-butyrateHMDB
cis-Butyric acid, 3-hexenyl esterHMDB
cis-Hex-3-enyl butanoateHMDB
cis-Hex-3-enyl butyrateHMDB
FEMA 3402HMDB
Hex-3(Z)-enyl butanoateHMDB
Hexenyl butanoate (3Z)HMDB
Is-3-hexenyl N-butyrateHMDB
3Z-Hexenyl butyric acidGenerator
Chemical FormulaC10H18O2
Average Molecular Weight170.2487
Monoisotopic Molecular Weight170.13067982
IUPAC Name(3Z)-hex-3-en-1-yl butanoate
Traditional Name(3Z)-hex-3-en-1-yl butanoate
CAS Registry Number16491-36-4
SMILES
CCCC(=O)OCC\C=C/CC
InChI Identifier
InChI=1S/C10H18O2/c1-3-5-6-7-9-12-10(11)8-4-2/h5-6H,3-4,7-9H2,1-2H3/b6-5-
InChI KeyZCHOPXVYTWUHDS-WAYWQWQTSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as fatty acid esters. These are carboxylic ester derivatives of a fatty acid.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassFatty Acyls
Sub ClassFatty acid esters
Direct ParentFatty acid esters
Alternative Parents
Substituents
  • Fatty acid ester
  • Carboxylic acid ester
  • Monocarboxylic acid or derivatives
  • Carboxylic acid derivative
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Carbonyl group
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External Descriptors
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling Point96.00 °C. @ 20.00 mm HgThe Good Scents Company Information System
Water Solubility0 slightlyThe Good Scents Company Information System
LogP3.419 (est)The Good Scents Company Information System
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.28 g/LALOGPS
logP3.18ALOGPS
logP2.92ChemAxon
logS-2.8ALOGPS
pKa (Strongest Basic)-7ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count1ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area26.3 ŲChemAxon
Rotatable Bond Count7ChemAxon
Refractivity50.83 m³·mol⁻¹ChemAxon
Polarizability20.28 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+141.63631661259
DarkChem[M-H]-138.07431661259
DeepCCS[M+H]+138.13430932474
DeepCCS[M-H]-135.48430932474
DeepCCS[M-2H]-171.96230932474
DeepCCS[M+Na]+147.32530932474
AllCCS[M+H]+143.632859911
AllCCS[M+H-H2O]+139.832859911
AllCCS[M+NH4]+147.132859911
AllCCS[M+Na]+148.132859911
AllCCS[M-H]-144.432859911
AllCCS[M+Na-2H]-146.232859911
AllCCS[M+HCOO]-148.332859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
cis-3-Hexenyl butyrateCCCC(=O)OCC\C=C/CC1480.8Standard polar33892256
cis-3-Hexenyl butyrateCCCC(=O)OCC\C=C/CC1158.6Standard non polar33892256
cis-3-Hexenyl butyrateCCCC(=O)OCC\C=C/CC1209.6Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Experimental GC-MSGC-MS Spectrum - cis-3-Hexenyl butyrate EI-B (Non-derivatized)splash10-00rx-9000000000-93e85c48cd98fe637f242017-09-12HMDB team, MONA, MassBankView Spectrum
Experimental GC-MSGC-MS Spectrum - cis-3-Hexenyl butyrate EI-B (Non-derivatized)splash10-00rx-9000000000-93e85c48cd98fe637f242018-05-18HMDB team, MONA, MassBankView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - cis-3-Hexenyl butyrate GC-MS (Non-derivatized) - 70eV, Positivesplash10-00rx-9000000000-0b27f77b4fa5f2acfa3d2017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - cis-3-Hexenyl butyrate GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
MSMass Spectrum (Electron Ionization)splash10-00sl-9000000000-ee6fcd894c59652846982015-03-01Not AvailableView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - cis-3-Hexenyl butyrate 10V, Positive-QTOFsplash10-00di-6900000000-cbb7019e3a3002668eb02016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - cis-3-Hexenyl butyrate 20V, Positive-QTOFsplash10-0089-9100000000-8704e54ca7f9548209ba2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - cis-3-Hexenyl butyrate 40V, Positive-QTOFsplash10-000x-9000000000-e9ca1f61ae6cc2b616052016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - cis-3-Hexenyl butyrate 10V, Negative-QTOFsplash10-014i-9700000000-05311f80cf66aff1287a2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - cis-3-Hexenyl butyrate 20V, Negative-QTOFsplash10-014r-9100000000-80466b7908d7a7bf4b3b2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - cis-3-Hexenyl butyrate 40V, Negative-QTOFsplash10-00kf-9000000000-c207c15621f07911056f2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - cis-3-Hexenyl butyrate 10V, Negative-QTOFsplash10-00kb-9500000000-536da18d3d38162ef2a62021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - cis-3-Hexenyl butyrate 20V, Negative-QTOFsplash10-000j-9000000000-60fa4597785928c936992021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - cis-3-Hexenyl butyrate 40V, Negative-QTOFsplash10-014i-9000000000-e0b0792598127680e9c92021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - cis-3-Hexenyl butyrate 10V, Positive-QTOFsplash10-001i-9000000000-0a8f0a1df3e7b0b9b9cb2021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - cis-3-Hexenyl butyrate 20V, Positive-QTOFsplash10-053r-9000000000-943fc92b1094efebc6652021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - cis-3-Hexenyl butyrate 40V, Positive-QTOFsplash10-052f-9000000000-e52ee53e6e8f8fd3c76a2021-09-25Wishart LabView Spectrum

IR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+H]+)2023-02-04FELIX labView Spectrum
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+Na]+)2023-02-04FELIX labView Spectrum
Biological Properties
Cellular Locations
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB011407
KNApSAcK IDC00053005
Chemspider ID4509328
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound5352438
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1015591
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.