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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 18:58:20 UTC
Update Date2022-03-07 02:54:01 UTC
HMDB IDHMDB0034179
Secondary Accession Numbers
  • HMDB34179
Metabolite Identification
Common NameMalabaricano
DescriptionMalabaricano belongs to the class of organic compounds known as 7,7'-epoxylignans. These are lignans with a structure based on a 2,5-diaryl-3, 4-dimethyltetrahydrofuran skeleton. Malabaricano has been detected, but not quantified in, herbs and spices. This could make malabaricano a potential biomarker for the consumption of these foods. Based on a literature review a significant number of articles have been published on Malabaricano.
Structure
Data?1563862523
Synonyms
ValueSource
(2a,3b,4b,5a)-FormHMDB
4,4'-Dihydroxy-3,3'-dimethoxy-7,7'-epoxylignanHMDB
CalophyllinHMDB
Homocysteine sulfonamideHMDB
MalabaricanolHMDB
Nectandrin bHMDB
Tetrahydrofuroguaiacin aHMDB
Chemical FormulaC20H24O5
Average Molecular Weight344.4016
Monoisotopic Molecular Weight344.162373878
IUPAC Name4-[5-(4-hydroxy-3-methoxyphenyl)-3,4-dimethyloxolan-2-yl]-2-methoxyphenol
Traditional Name4-[5-(4-hydroxy-3-methoxyphenyl)-3,4-dimethyloxolan-2-yl]-2-methoxyphenol
CAS Registry Number74683-16-2
SMILES
COC1=C(O)C=CC(=C1)C1OC(C(C)C1C)C1=CC(OC)=C(O)C=C1
InChI Identifier
InChI=1S/C20H24O5/c1-11-12(2)20(14-6-8-16(22)18(10-14)24-4)25-19(11)13-5-7-15(21)17(9-13)23-3/h5-12,19-22H,1-4H3
InChI KeyGMXMKSFJQLFOSO-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as 7,7'-epoxylignans. These are lignans with a structure based on a 2,5-diaryl-3, 4-dimethyltetrahydrofuran skeleton.
KingdomOrganic compounds
Super ClassLignans, neolignans and related compounds
ClassFuranoid lignans
Sub ClassTetrahydrofuran lignans
Direct Parent7,7'-epoxylignans
Alternative Parents
Substituents
  • 7,7p-epoxylignan
  • Dibenzylbutane lignan skeleton
  • Methoxyphenol
  • Anisole
  • Phenoxy compound
  • Phenol ether
  • Methoxybenzene
  • Phenol
  • 1-hydroxy-2-unsubstituted benzenoid
  • Alkyl aryl ether
  • Benzenoid
  • Monocyclic benzene moiety
  • Tetrahydrofuran
  • Ether
  • Dialkyl ether
  • Organoheterocyclic compound
  • Oxacycle
  • Organic oxygen compound
  • Organooxygen compound
  • Hydrocarbon derivative
  • Aromatic heteromonocyclic compound
Molecular FrameworkAromatic heteromonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water Solubility4.37 mg/L @ 25 °C (est)The Good Scents Company Information System
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.018 g/LALOGPS
logP3.54ALOGPS
logP3.91ChemAxon
logS-4.3ALOGPS
pKa (Strongest Acidic)9.61ChemAxon
pKa (Strongest Basic)-4.1ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count5ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area68.15 ŲChemAxon
Rotatable Bond Count4ChemAxon
Refractivity94.95 m³·mol⁻¹ChemAxon
Polarizability37.29 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+182.71331661259
DarkChem[M-H]-184.63431661259
DeepCCS[M+H]+189.6930932474
DeepCCS[M-H]-187.33230932474
DeepCCS[M-2H]-221.57930932474
DeepCCS[M+Na]+196.80630932474
AllCCS[M+H]+184.832859911
AllCCS[M+H-H2O]+181.632859911
AllCCS[M+NH4]+187.832859911
AllCCS[M+Na]+188.732859911
AllCCS[M-H]-188.832859911
AllCCS[M+Na-2H]-188.932859911
AllCCS[M+HCOO]-189.132859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
MalabaricanoCOC1=C(O)C=CC(=C1)C1OC(C(C)C1C)C1=CC(OC)=C(O)C=C14268.5Standard polar33892256
MalabaricanoCOC1=C(O)C=CC(=C1)C1OC(C(C)C1C)C1=CC(OC)=C(O)C=C12817.8Standard non polar33892256
MalabaricanoCOC1=C(O)C=CC(=C1)C1OC(C(C)C1C)C1=CC(OC)=C(O)C=C12841.0Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Malabaricano,1TMS,isomer #1COC1=CC(C2OC(C3=CC=C(O[Si](C)(C)C)C(OC)=C3)C(C)C2C)=CC=C1O2869.4Semi standard non polar33892256
Malabaricano,2TMS,isomer #1COC1=CC(C2OC(C3=CC=C(O[Si](C)(C)C)C(OC)=C3)C(C)C2C)=CC=C1O[Si](C)(C)C2848.2Semi standard non polar33892256
Malabaricano,1TBDMS,isomer #1COC1=CC(C2OC(C3=CC=C(O[Si](C)(C)C(C)(C)C)C(OC)=C3)C(C)C2C)=CC=C1O3139.9Semi standard non polar33892256
Malabaricano,2TBDMS,isomer #1COC1=CC(C2OC(C3=CC=C(O[Si](C)(C)C(C)(C)C)C(OC)=C3)C(C)C2C)=CC=C1O[Si](C)(C)C(C)(C)C3325.9Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Malabaricano GC-MS (Non-derivatized) - 70eV, Positivesplash10-01p6-0901000000-a274db07a6d0aa7ffd242017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Malabaricano GC-MS (2 TMS) - 70eV, Positivesplash10-00dj-1090300000-fc1866c485fdc2a2575b2017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Malabaricano GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Malabaricano GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Experimental LC-MS/MSLC-MS/MS Spectrum - Malabaricano , positive-QTOFsplash10-0f79-1910000000-82decb489ad343a94c2b2017-09-14HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Malabaricano , positive-QTOFsplash10-0k9i-1920000000-1436e7c1629df66a4e752017-09-14HMDB team, MONAView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Malabaricano 10V, Positive-QTOFsplash10-0002-4209000000-84f8e5aae0ae2bf6c8bb2015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Malabaricano 20V, Positive-QTOFsplash10-0k92-5869000000-7e11cd9000334a45942a2015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Malabaricano 40V, Positive-QTOFsplash10-0zfr-9500000000-57c7c46045a8ade6f45c2015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Malabaricano 10V, Positive-QTOFsplash10-0002-4209000000-84f8e5aae0ae2bf6c8bb2015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Malabaricano 20V, Positive-QTOFsplash10-0k92-5869000000-7e11cd9000334a45942a2015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Malabaricano 40V, Positive-QTOFsplash10-0zfr-9500000000-57c7c46045a8ade6f45c2015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Malabaricano 10V, Negative-QTOFsplash10-0006-0009000000-3b278d012d09079ad49e2015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Malabaricano 20V, Negative-QTOFsplash10-0006-0129000000-636394c00370d800b6762015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Malabaricano 40V, Negative-QTOFsplash10-0adj-1964000000-f8ca40d58c7734fbce322015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Malabaricano 10V, Negative-QTOFsplash10-0006-0009000000-3b278d012d09079ad49e2015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Malabaricano 20V, Negative-QTOFsplash10-0006-0129000000-636394c00370d800b6762015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Malabaricano 40V, Negative-QTOFsplash10-0adj-1964000000-f8ca40d58c7734fbce322015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Malabaricano 10V, Positive-QTOFsplash10-0002-0009000000-5e26fee679ec68003df12021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Malabaricano 20V, Positive-QTOFsplash10-0072-1934000000-14274dc48ff7226442842021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Malabaricano 40V, Positive-QTOFsplash10-000i-1910000000-af089c0441d9e43b2a3d2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Malabaricano 10V, Negative-QTOFsplash10-0006-0009000000-4fdd89030f0f4a9209ed2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Malabaricano 20V, Negative-QTOFsplash10-052f-0269000000-3407241c796443c38fc62021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Malabaricano 40V, Negative-QTOFsplash10-0006-0095000000-7e072d6abe75444368bb2021-09-24Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB012471
KNApSAcK IDC00024162
Chemspider ID22369992
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound13870570
PDB IDNot Available
ChEBI ID174641
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1840971
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .