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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 19:19:00 UTC
Update Date2022-03-07 02:54:07 UTC
HMDB IDHMDB0034474
Secondary Accession Numbers
  • HMDB34474
Metabolite Identification
Common NameNiveusin C
DescriptionNiveusin C, also known as annuithrin, belongs to the class of organic compounds known as terpene lactones. These are prenol lipids containing a lactone ring. Niveusin C is an extremely weak basic (essentially neutral) compound (based on its pKa).
Structure
Data?1563862569
Synonyms
ValueSource
AnnuithrinHMDB
(1S,2Z,4S,8R,9R,11R,12S)-1,12-Dihydroxy-2,11-dimethyl-7-methylidene-6-oxo-5,14-dioxatricyclo[9.2.1.0⁴,⁸]tetradec-2-en-9-yl (2Z)-2-methylbut-2-enoic acidGenerator
Chemical FormulaC20H26O7
Average Molecular Weight378.4162
Monoisotopic Molecular Weight378.167853186
IUPAC Name(1R,2Z,4S,8R,9R,11R,12S)-1,12-dihydroxy-2,11-dimethyl-7-methylidene-6-oxo-5,14-dioxatricyclo[9.2.1.0⁴,⁸]tetradec-2-en-9-yl (2Z)-2-methylbut-2-enoate
Traditional Name(1R,2Z,4S,8R,9R,11R,12S)-1,12-dihydroxy-2,11-dimethyl-7-methylidene-6-oxo-5,14-dioxatricyclo[9.2.1.0⁴,⁸]tetradec-2-en-9-yl (2Z)-2-methylbut-2-enoate
CAS Registry Number75680-27-2
SMILES
C\C=C(\C)C(=O)O[C@@H]1C[C@@]2(C)O[C@](O)(C[C@@H]2O)\C(C)=C/[C@@H]2OC(=O)C(=C)[C@H]12
InChI Identifier
InChI=1S/C20H26O7/c1-6-10(2)17(22)26-14-8-19(5)15(21)9-20(24,27-19)11(3)7-13-16(14)12(4)18(23)25-13/h6-7,13-16,21,24H,4,8-9H2,1-3,5H3/b10-6-,11-7-/t13-,14+,15-,16-,19+,20-/m0/s1
InChI KeyWGVJNQGTZSPMCY-GEYOPIBESA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as terpene lactones. These are prenol lipids containing a lactone ring.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassTerpene lactones
Direct ParentTerpene lactones
Alternative ParentsNot Available
SubstituentsNot Available
Molecular FrameworkAliphatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Process
Role
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point125 - 126 °CNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility1.52 g/LALOGPS
logP1.21ALOGPS
logP2.43ChemAxon
logS-2.4ALOGPS
pKa (Strongest Acidic)6.21ChemAxon
pKa (Strongest Basic)-3.3ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count5ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area102.29 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity96.59 m³·mol⁻¹ChemAxon
Polarizability39.05 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+190.46731661259
DarkChem[M-H]-186.75231661259
DeepCCS[M-2H]-219.29530932474
DeepCCS[M+Na]+193.50130932474
AllCCS[M+H]+190.232859911
AllCCS[M+H-H2O]+187.532859911
AllCCS[M+NH4]+192.632859911
AllCCS[M+Na]+193.332859911
AllCCS[M-H]-191.932859911
AllCCS[M+Na-2H]-192.332859911
AllCCS[M+HCOO]-192.932859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Niveusin CC\C=C(\C)C(=O)O[C@@H]1C[C@@]2(C)O[C@](O)(C[C@@H]2O)\C(C)=C/[C@@H]2OC(=O)C(=C)[C@H]124471.0Standard polar33892256
Niveusin CC\C=C(\C)C(=O)O[C@@H]1C[C@@]2(C)O[C@](O)(C[C@@H]2O)\C(C)=C/[C@@H]2OC(=O)C(=C)[C@H]122529.6Standard non polar33892256
Niveusin CC\C=C(\C)C(=O)O[C@@H]1C[C@@]2(C)O[C@](O)(C[C@@H]2O)\C(C)=C/[C@@H]2OC(=O)C(=C)[C@H]122765.3Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Niveusin C,1TMS,isomer #1C=C1C(=O)O[C@H]2/C=C(/C)[C@@]3(O[Si](C)(C)C)C[C@H](O)[C@@](C)(C[C@@H](OC(=O)/C(C)=C\C)[C@@H]12)O32658.4Semi standard non polar33892256
Niveusin C,1TMS,isomer #2C=C1C(=O)O[C@H]2/C=C(/C)[C@@]3(O)C[C@H](O[Si](C)(C)C)[C@@](C)(C[C@@H](OC(=O)/C(C)=C\C)[C@@H]12)O32656.0Semi standard non polar33892256
Niveusin C,2TMS,isomer #1C=C1C(=O)O[C@H]2/C=C(/C)[C@@]3(O[Si](C)(C)C)C[C@H](O[Si](C)(C)C)[C@@](C)(C[C@@H](OC(=O)/C(C)=C\C)[C@@H]12)O32677.1Semi standard non polar33892256
Niveusin C,1TBDMS,isomer #1C=C1C(=O)O[C@H]2/C=C(/C)[C@@]3(O[Si](C)(C)C(C)(C)C)C[C@H](O)[C@@](C)(C[C@@H](OC(=O)/C(C)=C\C)[C@@H]12)O32876.8Semi standard non polar33892256
Niveusin C,1TBDMS,isomer #2C=C1C(=O)O[C@H]2/C=C(/C)[C@@]3(O)C[C@H](O[Si](C)(C)C(C)(C)C)[C@@](C)(C[C@@H](OC(=O)/C(C)=C\C)[C@@H]12)O32869.4Semi standard non polar33892256
Niveusin C,2TBDMS,isomer #1C=C1C(=O)O[C@H]2/C=C(/C)[C@@]3(O[Si](C)(C)C(C)(C)C)C[C@H](O[Si](C)(C)C(C)(C)C)[C@@](C)(C[C@@H](OC(=O)/C(C)=C\C)[C@@H]12)O33117.0Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Niveusin C GC-MS (Non-derivatized) - 70eV, Positivesplash10-06sl-9005000000-dba6851e52631c1d12fe2017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Niveusin C GC-MS (2 TMS) - 70eV, Positivesplash10-0a59-9100310000-3dcf62b02f82dd0755b42017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Niveusin C GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Niveusin C 10V, Positive-QTOFsplash10-004i-3029000000-8a3702953c54978ea92b2017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Niveusin C 20V, Positive-QTOFsplash10-057i-9074000000-6f28250943839bc7f2582017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Niveusin C 40V, Positive-QTOFsplash10-0a59-9030000000-7f719c01573e08f6bcc72017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Niveusin C 10V, Negative-QTOFsplash10-004i-0019000000-ff1348c903a57f23491d2017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Niveusin C 20V, Negative-QTOFsplash10-057j-6029000000-5f1109e65787704de5832017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Niveusin C 40V, Negative-QTOFsplash10-0ziv-5090000000-078e2e0c39aff2008caa2017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Niveusin C 10V, Negative-QTOFsplash10-004j-1093000000-a45f35179b06ec2311f72021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Niveusin C 20V, Negative-QTOFsplash10-002b-6090000000-c380272ec11412d010492021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Niveusin C 40V, Negative-QTOFsplash10-002b-4090000000-ebcb3d86340880c806902021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Niveusin C 10V, Positive-QTOFsplash10-004i-0090000000-4aeee19b2d437cda102f2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Niveusin C 20V, Positive-QTOFsplash10-06vi-0091000000-e0387beaa172d1a1341b2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Niveusin C 40V, Positive-QTOFsplash10-0a4r-7091000000-f1c31490e49ce1f071562021-09-22Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Cytoplasm
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB012884
KNApSAcK IDC00003338
Chemspider IDNot Available
KEGG Compound IDC09517
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.