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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 20:06:04 UTC
Update Date2022-03-07 02:54:23 UTC
HMDB IDHMDB0035154
Secondary Accession Numbers
  • HMDB35154
Metabolite Identification
Common Name(2Z,6E)-3,7,11,15,19-Pentamethyl-2,6-eicosadien-1-ol
Description(2Z,6E)-3,7,11,15,19-Pentamethyl-2,6-eicosadien-1-ol belongs to the class of organic compounds known as sesterterpenoids. These are terpenes composed of five consecutive isoprene units. Based on a literature review a small amount of articles have been published on (2Z,6E)-3,7,11,15,19-Pentamethyl-2,6-eicosadien-1-ol.
Structure
Data?1563862674
Synonyms
ValueSource
2,5-diiodo-Benzoic acidHMDB
2,5-DIIODOBENZOIC ACIDHMDB
Chemical FormulaC25H48O
Average Molecular Weight364.648
Monoisotopic Molecular Weight364.370516158
IUPAC Name(2E,6E)-3,7,11,15,19-pentamethylicosa-2,6-dien-1-ol
Traditional Name(2E,6E)-3,7,11,15,19-pentamethylicosa-2,6-dien-1-ol
CAS Registry Number26549-03-1
SMILES
CC(C)CCCC(C)CCCC(C)CCC\C(C)=C\CC\C(C)=C\CO
InChI Identifier
InChI=1S/C25H48O/c1-21(2)11-7-12-22(3)13-8-14-23(4)15-9-16-24(5)17-10-18-25(6)19-20-26/h17,19,21-23,26H,7-16,18,20H2,1-6H3/b24-17+,25-19+
InChI KeyQVAALZYWZYXTTP-OCQYTUGVSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as sesterterpenoids. These are terpenes composed of five consecutive isoprene units.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassSesterterpenoids
Direct ParentSesterterpenoids
Alternative Parents
Substituents
  • Sesterterpenoid
  • Polyprenol skeleton
  • Long chain fatty alcohol
  • Fatty alcohol
  • Fatty acyl
  • Organic oxygen compound
  • Hydrocarbon derivative
  • Primary alcohol
  • Organooxygen compound
  • Alcohol
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Process
Role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water Solubility1.4e-05 mg/L @ 25 °C (est)The Good Scents Company Information System
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility9.4e-05 g/LALOGPS
logP8.88ALOGPS
logP8.7ChemAxon
logS-6.6ALOGPS
pKa (Strongest Acidic)16.33ChemAxon
pKa (Strongest Basic)-2.2ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count1ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area20.23 ŲChemAxon
Rotatable Bond Count16ChemAxon
Refractivity120.04 m³·mol⁻¹ChemAxon
Polarizability49.97 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+191.88831661259
DarkChem[M-H]-186.12831661259
DeepCCS[M+H]+201.98630932474
DeepCCS[M-H]-199.43530932474
DeepCCS[M-2H]-232.6530932474
DeepCCS[M+Na]+208.32930932474
AllCCS[M+H]+206.832859911
AllCCS[M+H-H2O]+204.532859911
AllCCS[M+NH4]+208.932859911
AllCCS[M+Na]+209.532859911
AllCCS[M-H]-199.032859911
AllCCS[M+Na-2H]-201.832859911
AllCCS[M+HCOO]-205.032859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
(2Z,6E)-3,7,11,15,19-Pentamethyl-2,6-eicosadien-1-olCC(C)CCCC(C)CCCC(C)CCC\C(C)=C\CC\C(C)=C\CO2573.4Standard polar33892256
(2Z,6E)-3,7,11,15,19-Pentamethyl-2,6-eicosadien-1-olCC(C)CCCC(C)CCCC(C)CCC\C(C)=C\CC\C(C)=C\CO2537.3Standard non polar33892256
(2Z,6E)-3,7,11,15,19-Pentamethyl-2,6-eicosadien-1-olCC(C)CCCC(C)CCCC(C)CCC\C(C)=C\CC\C(C)=C\CO2568.4Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
(2Z,6E)-3,7,11,15,19-Pentamethyl-2,6-eicosadien-1-ol,1TMS,isomer #1C/C(=C\CO[Si](C)(C)C)CC/C=C(\C)CCCC(C)CCCC(C)CCCC(C)C2613.6Semi standard non polar33892256
(2Z,6E)-3,7,11,15,19-Pentamethyl-2,6-eicosadien-1-ol,1TBDMS,isomer #1C/C(=C\CO[Si](C)(C)C(C)(C)C)CC/C=C(\C)CCCC(C)CCCC(C)CCCC(C)C2843.4Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - (2Z,6E)-3,7,11,15,19-Pentamethyl-2,6-eicosadien-1-ol GC-MS (Non-derivatized) - 70eV, Positivesplash10-004v-6974000000-2a4ef83362351793f0642017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (2Z,6E)-3,7,11,15,19-Pentamethyl-2,6-eicosadien-1-ol GC-MS (1 TMS) - 70eV, Positivesplash10-00fr-9662400000-929722a3e0060ef135892017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (2Z,6E)-3,7,11,15,19-Pentamethyl-2,6-eicosadien-1-ol GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (2Z,6E)-3,7,11,15,19-Pentamethyl-2,6-eicosadien-1-ol 10V, Positive-QTOFsplash10-014j-0019000000-26a5bfea5d7bfa8ec3cd2016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (2Z,6E)-3,7,11,15,19-Pentamethyl-2,6-eicosadien-1-ol 20V, Positive-QTOFsplash10-00kb-6594000000-168599d0c61a9ac4f3612016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (2Z,6E)-3,7,11,15,19-Pentamethyl-2,6-eicosadien-1-ol 40V, Positive-QTOFsplash10-0lk9-8492000000-000c602b2936bbdc9d372016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (2Z,6E)-3,7,11,15,19-Pentamethyl-2,6-eicosadien-1-ol 10V, Negative-QTOFsplash10-03di-0009000000-fda727f85fbc83ae52b72016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (2Z,6E)-3,7,11,15,19-Pentamethyl-2,6-eicosadien-1-ol 20V, Negative-QTOFsplash10-01q9-0009000000-90110778a917f2b5b8e32016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (2Z,6E)-3,7,11,15,19-Pentamethyl-2,6-eicosadien-1-ol 40V, Negative-QTOFsplash10-014j-4329000000-f86fbce832bede770d4f2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (2Z,6E)-3,7,11,15,19-Pentamethyl-2,6-eicosadien-1-ol 10V, Positive-QTOFsplash10-014j-2139000000-53cbd68b1680b61365472021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (2Z,6E)-3,7,11,15,19-Pentamethyl-2,6-eicosadien-1-ol 20V, Positive-QTOFsplash10-0r6r-7922000000-47206d16350d1d28e9072021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (2Z,6E)-3,7,11,15,19-Pentamethyl-2,6-eicosadien-1-ol 40V, Positive-QTOFsplash10-0ac1-9200000000-ef7f233e156cec39d6b52021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (2Z,6E)-3,7,11,15,19-Pentamethyl-2,6-eicosadien-1-ol 10V, Negative-QTOFsplash10-03di-0009000000-7898b749e7c4ad06216b2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (2Z,6E)-3,7,11,15,19-Pentamethyl-2,6-eicosadien-1-ol 20V, Negative-QTOFsplash10-03di-0009000000-ad655a046cb3c2e3f2702021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (2Z,6E)-3,7,11,15,19-Pentamethyl-2,6-eicosadien-1-ol 40V, Negative-QTOFsplash10-01ow-2149000000-640b8eae45a08972a8412021-09-24Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB013791
KNApSAcK IDNot Available
Chemspider ID35013859
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound57418214
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1848051
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.