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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 20:22:59 UTC
Update Date2022-03-07 02:54:29 UTC
HMDB IDHMDB0035403
Secondary Accession Numbers
  • HMDB35403
Metabolite Identification
Common NameGingerenone A
DescriptionGingerenone A belongs to the class of organic compounds known as linear diarylheptanoids. These are diarylheptanoids with an open heptane chain. The two aromatic rings are linked only by the heptane chain. Gingerenone A has been detected, but not quantified in, gingers (Zingiber officinale) and herbs and spices. This could make gingerenone a a potential biomarker for the consumption of these foods. Based on a literature review very few articles have been published on Gingerenone A.
Structure
Data?1563862714
Synonyms
ValueSource
1,7-Bis(4-hydroxy-3-methoxyphenyl)-4-hepten-3-one, 9ciHMDB
Chemical FormulaC21H24O5
Average Molecular Weight356.4123
Monoisotopic Molecular Weight356.162373878
IUPAC Name(4E)-1,7-bis(4-hydroxy-3-methoxyphenyl)hept-4-en-3-one
Traditional Namegingerenone A
CAS Registry Number128700-97-0
SMILES
COC1=CC(CCC(=O)\C=C\CCC2=CC(OC)=C(O)C=C2)=CC=C1O
InChI Identifier
InChI=1S/C21H24O5/c1-25-20-13-15(8-11-18(20)23)5-3-4-6-17(22)10-7-16-9-12-19(24)21(14-16)26-2/h4,6,8-9,11-14,23-24H,3,5,7,10H2,1-2H3/b6-4+
InChI KeyFWDXZNKYDTXGOT-GQCTYLIASA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as linear diarylheptanoids. These are diarylheptanoids with an open heptane chain. The two aromatic rings are linked only by the heptane chain.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassDiarylheptanoids
Sub ClassLinear diarylheptanoids
Direct ParentLinear diarylheptanoids
Alternative Parents
Substituents
  • Linear 1,7-diphenylheptane skeleton
  • Shogaol
  • Methoxyphenol
  • Anisole
  • Methoxybenzene
  • Phenol ether
  • Phenoxy compound
  • Alkyl aryl ether
  • 1-hydroxy-2-unsubstituted benzenoid
  • Phenol
  • Benzenoid
  • Monocyclic benzene moiety
  • Alpha,beta-unsaturated ketone
  • Enone
  • Acryloyl-group
  • Ketone
  • Ether
  • Organic oxygen compound
  • Carbonyl group
  • Organooxygen compound
  • Hydrocarbon derivative
  • Organic oxide
  • Aromatic homomonocyclic compound
Molecular FrameworkAromatic homomonocyclic compounds
External Descriptors
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
Role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water Solubility2.6 mg/L @ 25 °C (est)The Good Scents Company Information System
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.0036 g/LALOGPS
logP4.24ALOGPS
logP4.63ChemAxon
logS-5ALOGPS
pKa (Strongest Acidic)9.78ChemAxon
pKa (Strongest Basic)-4.3ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count5ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area75.99 ŲChemAxon
Rotatable Bond Count9ChemAxon
Refractivity102.02 m³·mol⁻¹ChemAxon
Polarizability39.64 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+182.48330932474
DeepCCS[M-H]-180.12530932474
DeepCCS[M-2H]-214.44630932474
DeepCCS[M+Na]+190.52630932474
AllCCS[M+H]+190.532859911
AllCCS[M+H-H2O]+187.232859911
AllCCS[M+NH4]+193.532859911
AllCCS[M+Na]+194.332859911
AllCCS[M-H]-188.832859911
AllCCS[M+Na-2H]-189.332859911
AllCCS[M+HCOO]-190.032859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Gingerenone ACOC1=CC(CCC(=O)\C=C\CCC2=CC(OC)=C(O)C=C2)=CC=C1O5351.9Standard polar33892256
Gingerenone ACOC1=CC(CCC(=O)\C=C\CCC2=CC(OC)=C(O)C=C2)=CC=C1O3125.6Standard non polar33892256
Gingerenone ACOC1=CC(CCC(=O)\C=C\CCC2=CC(OC)=C(O)C=C2)=CC=C1O3122.5Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Gingerenone A,1TMS,isomer #1COC1=CC(CCC(=O)/C=C/CCC2=CC=C(O[Si](C)(C)C)C(OC)=C2)=CC=C1O3125.7Semi standard non polar33892256
Gingerenone A,1TMS,isomer #2COC1=CC(CC/C=C/C(=O)CCC2=CC=C(O[Si](C)(C)C)C(OC)=C2)=CC=C1O3121.0Semi standard non polar33892256
Gingerenone A,1TMS,isomer #3COC1=CC(CC=C(/C=C/CCC2=CC=C(O)C(OC)=C2)O[Si](C)(C)C)=CC=C1O3340.5Semi standard non polar33892256
Gingerenone A,2TMS,isomer #1COC1=CC(CC/C=C/C(=O)CCC2=CC=C(O[Si](C)(C)C)C(OC)=C2)=CC=C1O[Si](C)(C)C3100.3Semi standard non polar33892256
Gingerenone A,2TMS,isomer #2COC1=CC(CC=C(/C=C/CCC2=CC=C(O[Si](C)(C)C)C(OC)=C2)O[Si](C)(C)C)=CC=C1O3314.3Semi standard non polar33892256
Gingerenone A,2TMS,isomer #3COC1=CC(CC/C=C/C(=CCC2=CC=C(O[Si](C)(C)C)C(OC)=C2)O[Si](C)(C)C)=CC=C1O3300.9Semi standard non polar33892256
Gingerenone A,3TMS,isomer #1COC1=CC(CC=C(/C=C/CCC2=CC=C(O[Si](C)(C)C)C(OC)=C2)O[Si](C)(C)C)=CC=C1O[Si](C)(C)C3326.6Semi standard non polar33892256
Gingerenone A,3TMS,isomer #1COC1=CC(CC=C(/C=C/CCC2=CC=C(O[Si](C)(C)C)C(OC)=C2)O[Si](C)(C)C)=CC=C1O[Si](C)(C)C3022.7Standard non polar33892256
Gingerenone A,1TBDMS,isomer #1COC1=CC(CCC(=O)/C=C/CCC2=CC=C(O[Si](C)(C)C(C)(C)C)C(OC)=C2)=CC=C1O3384.2Semi standard non polar33892256
Gingerenone A,1TBDMS,isomer #2COC1=CC(CC/C=C/C(=O)CCC2=CC=C(O[Si](C)(C)C(C)(C)C)C(OC)=C2)=CC=C1O3379.7Semi standard non polar33892256
Gingerenone A,1TBDMS,isomer #3COC1=CC(CC=C(/C=C/CCC2=CC=C(O)C(OC)=C2)O[Si](C)(C)C(C)(C)C)=CC=C1O3618.6Semi standard non polar33892256
Gingerenone A,2TBDMS,isomer #1COC1=CC(CC/C=C/C(=O)CCC2=CC=C(O[Si](C)(C)C(C)(C)C)C(OC)=C2)=CC=C1O[Si](C)(C)C(C)(C)C3572.7Semi standard non polar33892256
Gingerenone A,2TBDMS,isomer #2COC1=CC(CC=C(/C=C/CCC2=CC=C(O[Si](C)(C)C(C)(C)C)C(OC)=C2)O[Si](C)(C)C(C)(C)C)=CC=C1O3825.5Semi standard non polar33892256
Gingerenone A,2TBDMS,isomer #3COC1=CC(CC/C=C/C(=CCC2=CC=C(O[Si](C)(C)C(C)(C)C)C(OC)=C2)O[Si](C)(C)C(C)(C)C)=CC=C1O3825.6Semi standard non polar33892256
Gingerenone A,3TBDMS,isomer #1COC1=CC(CC=C(/C=C/CCC2=CC=C(O[Si](C)(C)C(C)(C)C)C(OC)=C2)O[Si](C)(C)C(C)(C)C)=CC=C1O[Si](C)(C)C(C)(C)C4008.0Semi standard non polar33892256
Gingerenone A,3TBDMS,isomer #1COC1=CC(CC=C(/C=C/CCC2=CC=C(O[Si](C)(C)C(C)(C)C)C(OC)=C2)O[Si](C)(C)C(C)(C)C)=CC=C1O[Si](C)(C)C(C)(C)C3605.7Standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Gingerenone A GC-MS (Non-derivatized) - 70eV, Positivesplash10-0573-1942000000-d26a3ebe9599ca6cca572017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Gingerenone A GC-MS (2 TMS) - 70eV, Positivesplash10-000i-2080900000-b54de3fc877ea4059caa2017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Gingerenone A GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gingerenone A 10V, Positive-QTOFsplash10-0a4i-0219000000-73aba82c001adaa5ea8e2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gingerenone A 20V, Positive-QTOFsplash10-0bvr-0965000000-f88e43554910cbea538e2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gingerenone A 40V, Positive-QTOFsplash10-0f79-2952000000-51744c8a988982d5e8072016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gingerenone A 10V, Negative-QTOFsplash10-0a4i-0109000000-feba985dd14406c517f12016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gingerenone A 20V, Negative-QTOFsplash10-0a4i-0449000000-93e0e17269c32ffa54952016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gingerenone A 40V, Negative-QTOFsplash10-0gb9-0694000000-2547b21546484932233a2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gingerenone A 10V, Positive-QTOFsplash10-0a4i-0109000000-89b8991e806af9585ade2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gingerenone A 20V, Positive-QTOFsplash10-000i-0935000000-0dc2568dd36401ce5ff22021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gingerenone A 40V, Positive-QTOFsplash10-000i-2930000000-6fa73ac6df630b03fe5f2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gingerenone A 10V, Negative-QTOFsplash10-0a4i-0019000000-edc3fdb928940fbfd7562021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gingerenone A 20V, Negative-QTOFsplash10-059i-0943000000-90a20b3a53cd13d9e43e2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gingerenone A 40V, Negative-QTOFsplash10-0udr-2942000000-66b1d1b5e693b02230722021-09-22Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB014078
KNApSAcK IDC00002747
Chemspider ID4445088
KEGG Compound IDC10460
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound5281775
PDB IDNot Available
ChEBI ID5352
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1849651
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .