Hmdb loader
Survey
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 21:14:12 UTC
Update Date2023-02-21 17:25:10 UTC
HMDB IDHMDB0036175
Secondary Accession Numbers
  • HMDB36175
Metabolite Identification
Common Name(Cyclohexylmethyl)pyrazine
Description(Cyclohexylmethyl)pyrazine belongs to the class of organic compounds known as pyrazines. Pyrazines are compounds containing a pyrazine ring, which is a six-member aromatic heterocycle, that consists of two nitrogen atoms (at positions 1 and 4) and four carbon atoms (Cyclohexylmethyl)pyrazine is a green, musty, and nutty tasting compound. Based on a literature review very few articles have been published on (Cyclohexylmethyl)pyrazine.
Structure
Data?1677000310
Synonyms
ValueSource
(2-Pyrazinylmethyl)cyclohexaneHMDB
(Cyclohexylmethyl)-pyrazineHMDB
2-(Cyclohexylmethyl)-pyrazineHMDB
2-(Cyclohexylmethyl)pyrazineHMDB
2-Pyrazine cyclohexyl methaneHMDB
2-Pyrazinyl cyclohexyl methaneHMDB
Cyclohexylmethyl pyrazineHMDB
FEMA 3631HMDB
Chemical FormulaC11H16N2
Average Molecular Weight176.2581
Monoisotopic Molecular Weight176.131348522
IUPAC Name2-(cyclohexylmethyl)pyrazine
Traditional Name2-(cyclohexylmethyl)pyrazine
CAS Registry Number28217-92-7
SMILES
C(C1CCCCC1)C1=CN=CC=N1
InChI Identifier
InChI=1S/C11H16N2/c1-2-4-10(5-3-1)8-11-9-12-6-7-13-11/h6-7,9-10H,1-5,8H2
InChI KeyDGJZDAIWCSVZBI-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as pyrazines. Pyrazines are compounds containing a pyrazine ring, which is a six-member aromatic heterocycle, that consists of two nitrogen atoms (at positions 1 and 4) and four carbon atoms.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassDiazines
Sub ClassPyrazines
Direct ParentPyrazines
Alternative Parents
Substituents
  • Pyrazine
  • Heteroaromatic compound
  • Azacycle
  • Organic nitrogen compound
  • Organopnictogen compound
  • Hydrocarbon derivative
  • Organonitrogen compound
  • Aromatic heteromonocyclic compound
Molecular FrameworkAromatic heteromonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effect
Disposition
ProcessNot Available
Role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling Point100.00 °C. @ 4.00 mm HgThe Good Scents Company Information System
Water Solubility0The Good Scents Company Information System
LogP2.772 (est)The Good Scents Company Information System
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.76 g/LALOGPS
logP2.73ALOGPS
logP1.97ChemAxon
logS-2.4ALOGPS
pKa (Strongest Basic)1.2ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count2ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area25.78 ŲChemAxon
Rotatable Bond Count2ChemAxon
Refractivity52.11 m³·mol⁻¹ChemAxon
Polarizability20.49 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+139.79331661259
DarkChem[M-H]-137.30631661259
DeepCCS[M+H]+138.18330932474
DeepCCS[M-H]-134.35230932474
DeepCCS[M-2H]-172.02330932474
DeepCCS[M+Na]+147.57730932474
AllCCS[M+H]+141.332859911
AllCCS[M+H-H2O]+136.932859911
AllCCS[M+NH4]+145.432859911
AllCCS[M+Na]+146.632859911
AllCCS[M-H]-145.532859911
AllCCS[M+Na-2H]-146.132859911
AllCCS[M+HCOO]-146.932859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
(Cyclohexylmethyl)pyrazineC(C1CCCCC1)C1=CN=CC=N11820.6Standard polar33892256
(Cyclohexylmethyl)pyrazineC(C1CCCCC1)C1=CN=CC=N11441.3Standard non polar33892256
(Cyclohexylmethyl)pyrazineC(C1CCCCC1)C1=CN=CC=N11492.2Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - (Cyclohexylmethyl)pyrazine GC-MS (Non-derivatized) - 70eV, Positivesplash10-001i-9600000000-a7244d9959b24bfd37182017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (Cyclohexylmethyl)pyrazine GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (Cyclohexylmethyl)pyrazine GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (Cyclohexylmethyl)pyrazine 10V, Positive-QTOFsplash10-004i-0900000000-23fadf7b2fa98554ed1a2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (Cyclohexylmethyl)pyrazine 20V, Positive-QTOFsplash10-004i-4900000000-17df6ad2116a3675ea862016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (Cyclohexylmethyl)pyrazine 40V, Positive-QTOFsplash10-052f-9400000000-edc84d609e6f5ef4fd752016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (Cyclohexylmethyl)pyrazine 10V, Negative-QTOFsplash10-004i-0900000000-8610763d04c6b4f741492016-08-04Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (Cyclohexylmethyl)pyrazine 20V, Negative-QTOFsplash10-004i-0900000000-da6ee60f9cd99dd2525b2016-08-04Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (Cyclohexylmethyl)pyrazine 40V, Negative-QTOFsplash10-004i-9800000000-a9ba431cf42625e806222016-08-04Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (Cyclohexylmethyl)pyrazine 10V, Negative-QTOFsplash10-004i-0900000000-e1c70c3db9ca63da84ca2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (Cyclohexylmethyl)pyrazine 20V, Negative-QTOFsplash10-004i-1900000000-9db2ebb0c492d61f51992021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (Cyclohexylmethyl)pyrazine 40V, Negative-QTOFsplash10-0006-9400000000-6f68782109783e7cb1b12021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (Cyclohexylmethyl)pyrazine 10V, Positive-QTOFsplash10-004i-0900000000-2d4635c7988a83ac9b6d2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (Cyclohexylmethyl)pyrazine 20V, Positive-QTOFsplash10-004i-4900000000-74938670f56f752dd6bb2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (Cyclohexylmethyl)pyrazine 40V, Positive-QTOFsplash10-0a4j-6900000000-4d9582ae15db3d4fa6592021-09-24Wishart LabView Spectrum

IR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+H]+)2023-02-04FELIX labView Spectrum
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+Na]+)2023-02-04FELIX labView Spectrum
Biological Properties
Cellular Locations
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB015029
KNApSAcK IDNot Available
Chemspider ID17332817
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound16204532
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1017481
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .