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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 21:57:18 UTC
Update Date2022-03-07 02:55:03 UTC
HMDB IDHMDB0036780
Secondary Accession Numbers
  • HMDB36780
Metabolite Identification
Common NameDiosbulbin F
DescriptionDiosbulbin F belongs to the class of organic compounds known as diterpene lactones. These are diterpenoids containing a lactone moiety. Based on a literature review a small amount of articles have been published on Diosbulbin F.
Structure
Data?1563862926
Synonyms
ValueSource
Carbonic acid, diethyl ester, polymer with 1,10-decanediolHMDB
Methyl 2-(furan-3-yl)-9-hydroxy-10b-methyl-4,6-dioxo-dodecahydro-1H-naphtho[2,1-c]pyran-7-carboxylic acidGenerator
Chemical FormulaC20H24O7
Average Molecular Weight376.4004
Monoisotopic Molecular Weight376.152203122
IUPAC Namemethyl 2-(furan-3-yl)-9-hydroxy-10b-methyl-4,6-dioxo-dodecahydro-1H-naphtho[2,1-c]pyran-7-carboxylate
Traditional Namemethyl 2-(furan-3-yl)-9-hydroxy-10b-methyl-4,6-dioxo-decahydronaphtho[2,1-c]pyran-7-carboxylate
CAS Registry NumberNot Available
SMILES
COC(=O)C1CC(O)CC2C1C(=O)CC1C(=O)OC(CC21C)C1=COC=C1
InChI Identifier
InChI=1S/C20H24O7/c1-20-8-16(10-3-4-26-9-10)27-19(24)14(20)7-15(22)17-12(18(23)25-2)5-11(21)6-13(17)20/h3-4,9,11-14,16-17,21H,5-8H2,1-2H3
InChI KeyLPHWMSVPEOJPHG-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as diterpene lactones. These are diterpenoids containing a lactone moiety.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassTerpene lactones
Direct ParentDiterpene lactones
Alternative Parents
Substituents
  • Diterpene lactone
  • Diterpenoid
  • Clerodane diterpenoid
  • Naphthopyran
  • Naphthalene
  • Delta valerolactone
  • Delta_valerolactone
  • Pyran
  • Oxane
  • Dicarboxylic acid or derivatives
  • Cyclic alcohol
  • Heteroaromatic compound
  • Methyl ester
  • Furan
  • Carboxylic acid ester
  • Secondary alcohol
  • Ketone
  • Lactone
  • Organoheterocyclic compound
  • Oxacycle
  • Carboxylic acid derivative
  • Organic oxide
  • Organic oxygen compound
  • Organooxygen compound
  • Hydrocarbon derivative
  • Carbonyl group
  • Alcohol
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Process
Role
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point211 - 212 °CNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.31 g/LALOGPS
logP1.18ALOGPS
logP1.13ChemAxon
logS-3.1ALOGPS
pKa (Strongest Acidic)15.21ChemAxon
pKa (Strongest Basic)-2.7ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area103.04 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity92.55 m³·mol⁻¹ChemAxon
Polarizability38.83 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+187.46431661259
DarkChem[M-H]-182.99131661259
DeepCCS[M-2H]-218.47530932474
DeepCCS[M+Na]+193.74130932474
AllCCS[M+H]+189.032859911
AllCCS[M+H-H2O]+186.332859911
AllCCS[M+NH4]+191.532859911
AllCCS[M+Na]+192.232859911
AllCCS[M-H]-191.432859911
AllCCS[M+Na-2H]-191.632859911
AllCCS[M+HCOO]-191.932859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Diosbulbin FCOC(=O)C1CC(O)CC2C1C(=O)CC1C(=O)OC(CC21C)C1=COC=C13722.3Standard polar33892256
Diosbulbin FCOC(=O)C1CC(O)CC2C1C(=O)CC1C(=O)OC(CC21C)C1=COC=C12620.1Standard non polar33892256
Diosbulbin FCOC(=O)C1CC(O)CC2C1C(=O)CC1C(=O)OC(CC21C)C1=COC=C13233.8Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Diosbulbin F,1TMS,isomer #1COC(=O)C1CC(O[Si](C)(C)C)CC2C1C(=O)CC1C(=O)OC(C3=COC=C3)CC12C3074.2Semi standard non polar33892256
Diosbulbin F,1TMS,isomer #2COC(=O)C1CC(O)CC2C1=C(O[Si](C)(C)C)CC1C(=O)OC(C3=COC=C3)CC12C3090.4Semi standard non polar33892256
Diosbulbin F,1TMS,isomer #3COC(=O)C1CC(O)CC2C1C(O[Si](C)(C)C)=CC1C(=O)OC(C3=COC=C3)CC12C3039.2Semi standard non polar33892256
Diosbulbin F,2TMS,isomer #1COC(=O)C1CC(O[Si](C)(C)C)CC2C1=C(O[Si](C)(C)C)CC1C(=O)OC(C3=COC=C3)CC12C3056.5Semi standard non polar33892256
Diosbulbin F,2TMS,isomer #1COC(=O)C1CC(O[Si](C)(C)C)CC2C1=C(O[Si](C)(C)C)CC1C(=O)OC(C3=COC=C3)CC12C2968.6Standard non polar33892256
Diosbulbin F,2TMS,isomer #2COC(=O)C1CC(O[Si](C)(C)C)CC2C1C(O[Si](C)(C)C)=CC1C(=O)OC(C3=COC=C3)CC12C2984.1Semi standard non polar33892256
Diosbulbin F,2TMS,isomer #2COC(=O)C1CC(O[Si](C)(C)C)CC2C1C(O[Si](C)(C)C)=CC1C(=O)OC(C3=COC=C3)CC12C2906.4Standard non polar33892256
Diosbulbin F,1TBDMS,isomer #1COC(=O)C1CC(O[Si](C)(C)C(C)(C)C)CC2C1C(=O)CC1C(=O)OC(C3=COC=C3)CC12C3282.4Semi standard non polar33892256
Diosbulbin F,1TBDMS,isomer #2COC(=O)C1CC(O)CC2C1=C(O[Si](C)(C)C(C)(C)C)CC1C(=O)OC(C3=COC=C3)CC12C3308.5Semi standard non polar33892256
Diosbulbin F,1TBDMS,isomer #3COC(=O)C1CC(O)CC2C1C(O[Si](C)(C)C(C)(C)C)=CC1C(=O)OC(C3=COC=C3)CC12C3247.5Semi standard non polar33892256
Diosbulbin F,2TBDMS,isomer #1COC(=O)C1CC(O[Si](C)(C)C(C)(C)C)CC2C1=C(O[Si](C)(C)C(C)(C)C)CC1C(=O)OC(C3=COC=C3)CC12C3468.7Semi standard non polar33892256
Diosbulbin F,2TBDMS,isomer #1COC(=O)C1CC(O[Si](C)(C)C(C)(C)C)CC2C1=C(O[Si](C)(C)C(C)(C)C)CC1C(=O)OC(C3=COC=C3)CC12C3434.3Standard non polar33892256
Diosbulbin F,2TBDMS,isomer #2COC(=O)C1CC(O[Si](C)(C)C(C)(C)C)CC2C1C(O[Si](C)(C)C(C)(C)C)=CC1C(=O)OC(C3=COC=C3)CC12C3375.8Semi standard non polar33892256
Diosbulbin F,2TBDMS,isomer #2COC(=O)C1CC(O[Si](C)(C)C(C)(C)C)CC2C1C(O[Si](C)(C)C(C)(C)C)=CC1C(=O)OC(C3=COC=C3)CC12C3340.8Standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Diosbulbin F GC-MS (Non-derivatized) - 70eV, Positivesplash10-053s-1459000000-a2470afcf2c4e96e71b52017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Diosbulbin F GC-MS (1 TMS) - 70eV, Positivesplash10-05fs-5295500000-4b37bb518892edab27f82017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Diosbulbin F GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Diosbulbin F 10V, Positive-QTOFsplash10-0a6r-0009000000-73a226a33c461a46cb842016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Diosbulbin F 20V, Positive-QTOFsplash10-056v-1019000000-83fa175d5b31f78efa652016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Diosbulbin F 40V, Positive-QTOFsplash10-0002-3495000000-8ae26666d9106fc4ccba2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Diosbulbin F 10V, Negative-QTOFsplash10-004i-0009000000-c5ad5e1fddf5d0d2dbd82016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Diosbulbin F 20V, Negative-QTOFsplash10-004i-0019000000-491098cb51702bf9345c2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Diosbulbin F 40V, Negative-QTOFsplash10-00kb-3096000000-2b45651bfb5f2f6f86b52016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Diosbulbin F 10V, Positive-QTOFsplash10-002b-0009000000-e0d864fbee04c8bd83cf2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Diosbulbin F 20V, Positive-QTOFsplash10-056s-0029000000-aa6542456f486b7f09102021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Diosbulbin F 40V, Positive-QTOFsplash10-00kg-5479000000-d768402beb00d8e1e4342021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Diosbulbin F 10V, Negative-QTOFsplash10-004i-0009000000-5c57f0048490445d62152021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Diosbulbin F 20V, Negative-QTOFsplash10-014i-0019000000-157f2264cbabb6a7c9152021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Diosbulbin F 40V, Negative-QTOFsplash10-01b9-3049000000-57228a4cfcff9f529f2f2021-09-25Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Cytoplasm
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB015722
KNApSAcK IDC00033664
Chemspider ID26503997
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound53463161
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.