Hmdb loader
Survey
You are using an unsupported browser. Please upgrade your browser to a newer version to get the best experience on Human Metabolome Database.

Showing metabocard for Rhodinyl formate (HMDB0037185)

Jump To Section:
IdentificationTaxonomyOntologyPhysical propertiesSpectraBiological propertiesConcentrationsLinksReferencesXML
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 22:25:36 UTC
Update Date2023-02-21 17:25:42 UTC
HMDB IDHMDB0037185
Secondary Accession Numbers
  • HMDB37185
Metabolite Identification
Common NameRhodinyl formate
DescriptionRhodinyl formate belongs to the class of organic compounds known as fatty alcohol esters. These are ester derivatives of a fatty alcohol. Based on a literature review a small amount of articles have been published on Rhodinyl formate.
Structure
Data?1677000342
MOL3D MOLSDF3D SDFPDB3D PDBSMILESInChI

MOL for HMDB0037185 (Rhodinyl formate)


  Mrv0541 05061309372D          

 13 12  0  0  0  0            999 V2000
   -4.8395   -2.4454    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1250   -3.6829    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2671   -3.6829    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6961   -2.8579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4105   -2.4454    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9816   -2.4454    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5526   -2.4454    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1618   -2.8579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5908   -2.8579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1250   -2.8579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2671   -2.8579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3052   -2.4454    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8763   -2.4454    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  5  4  1  0  0  0  0
  6  4  1  0  0  0  0
  8  7  1  0  0  0  0
 10  1  2  0  0  0  0
 10  2  1  0  0  0  0
 10  5  1  0  0  0  0
 11  3  1  0  0  0  0
 11  6  1  0  0  0  0
 11  7  1  0  0  0  0
 12  9  2  0  0  0  0
 13  8  1  0  0  0  0
 13  9  1  0  0  0  0
M  END
Download

3D MOL for HMDB0037185 (Rhodinyl formate)

HMDB0037185
     RDKit          3D
Rhodinyl formate
 33 32  0  0  0  0  0  0  0  0999 V2000
    4.5263   -0.7007   -0.0928 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4806    0.0476    0.1839 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4837    1.4773   -0.1948 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3145   -0.5197    0.8624 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0348   -0.4040    0.0304 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0652   -1.0155    0.8333 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4042   -0.9922    0.1717 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4323   -1.7259   -1.1300 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9856    0.3999    0.0750 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3195    0.4294   -0.5836 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8953    1.7019   -0.6970 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2010    2.4650    0.3985 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9765    2.0469    1.5558 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.5665   -1.7485    0.1655 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3764   -0.2612   -0.5942 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1590    2.0013    0.5353 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9976    1.5940   -1.1823 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4892    1.9451   -0.1761 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4290   -1.5792    1.1424 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0910    0.0252    1.8138 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1597   -0.9676   -0.9097 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8952    0.6689   -0.1759 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2021   -2.0833    1.0097 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1559   -0.5588    1.8389 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0981   -1.5564    0.8659 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9524   -1.1701   -1.9618 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4641   -2.0395   -1.3679 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8415   -2.6592   -1.0019 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3074    1.0623   -0.5222 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0620    0.8766    1.0691 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0757   -0.1926   -0.0161 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3256   -0.0127   -1.6016 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6433    3.4456    0.2774 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  3
  2  3  1  0
  2  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  7  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  2  0
  1 14  1  0
  1 15  1  0
  3 16  1  0
  3 17  1  0
  3 18  1  0
  4 19  1  0
  4 20  1  0
  5 21  1  0
  5 22  1  0
  6 23  1  0
  6 24  1  0
  7 25  1  0
  8 26  1  0
  8 27  1  0
  8 28  1  0
  9 29  1  0
  9 30  1  0
 10 31  1  0
 10 32  1  0
 12 33  1  0
M  END
Download

3D SDF for HMDB0037185 (Rhodinyl formate)


  Mrv0541 05061309372D          

 13 12  0  0  0  0            999 V2000
   -4.8395   -2.4454    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1250   -3.6829    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2671   -3.6829    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6961   -2.8579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4105   -2.4454    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9816   -2.4454    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5526   -2.4454    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1618   -2.8579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5908   -2.8579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1250   -2.8579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2671   -2.8579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3052   -2.4454    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8763   -2.4454    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  5  4  1  0  0  0  0
  6  4  1  0  0  0  0
  8  7  1  0  0  0  0
 10  1  2  0  0  0  0
 10  2  1  0  0  0  0
 10  5  1  0  0  0  0
 11  3  1  0  0  0  0
 11  6  1  0  0  0  0
 11  7  1  0  0  0  0
 12  9  2  0  0  0  0
 13  8  1  0  0  0  0
 13  9  1  0  0  0  0
M  END
> <DATABASE_ID>
HMDB0037185

> <DATABASE_NAME>
hmdb

> <SMILES>
CC(CCCC(C)=C)CCOC=O

> <INCHI_IDENTIFIER>
InChI=1S/C11H20O2/c1-10(2)5-4-6-11(3)7-8-13-9-12/h9,11H,1,4-8H2,2-3H3

> <INCHI_KEY>
VMBKZHMLQXCNCP-UHFFFAOYSA-N

> <FORMULA>
C11H20O2

> <MOLECULAR_WEIGHT>
184.2753

> <EXACT_MASS>
184.146329884

> <JCHEM_ACCEPTOR_COUNT>
1

> <JCHEM_AVERAGE_POLARIZABILITY>
22.32679408793522

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
3,7-dimethyloct-7-en-1-yl formate

> <ALOGPS_LOGP>
3.67

> <JCHEM_LOGP>
3.202415689999999

> <ALOGPS_LOGS>
-3.39

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
0

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_BASIC>
-6.816485774106051

> <JCHEM_POLAR_SURFACE_AREA>
26.3

> <JCHEM_REFRACTIVITY>
54.074600000000004

> <JCHEM_ROTATABLE_BOND_COUNT>
8

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
7.53e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
3,7-dimethyloct-7-en-1-yl formate

> <JCHEM_VEBER_RULE>
1

$$$$
Download

3D-SDF for HMDB0037185 (Rhodinyl formate)

HMDB0037185
     RDKit          3D
Rhodinyl formate
 33 32  0  0  0  0  0  0  0  0999 V2000
    4.5263   -0.7007   -0.0928 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4806    0.0476    0.1839 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4837    1.4773   -0.1948 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3145   -0.5197    0.8624 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0348   -0.4040    0.0304 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0652   -1.0155    0.8333 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4042   -0.9922    0.1717 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4323   -1.7259   -1.1300 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9856    0.3999    0.0750 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3195    0.4294   -0.5836 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8953    1.7019   -0.6970 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2010    2.4650    0.3985 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9765    2.0469    1.5558 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.5665   -1.7485    0.1655 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3764   -0.2612   -0.5942 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1590    2.0013    0.5353 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9976    1.5940   -1.1823 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4892    1.9451   -0.1761 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4290   -1.5792    1.1424 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0910    0.0252    1.8138 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1597   -0.9676   -0.9097 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8952    0.6689   -0.1759 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2021   -2.0833    1.0097 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1559   -0.5588    1.8389 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0981   -1.5564    0.8659 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9524   -1.1701   -1.9618 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4641   -2.0395   -1.3679 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8415   -2.6592   -1.0019 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3074    1.0623   -0.5222 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0620    0.8766    1.0691 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0757   -0.1926   -0.0161 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3256   -0.0127   -1.6016 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6433    3.4456    0.2774 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  3
  2  3  1  0
  2  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  7  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  2  0
  1 14  1  0
  1 15  1  0
  3 16  1  0
  3 17  1  0
  3 18  1  0
  4 19  1  0
  4 20  1  0
  5 21  1  0
  5 22  1  0
  6 23  1  0
  6 24  1  0
  7 25  1  0
  8 26  1  0
  8 27  1  0
  8 28  1  0
  9 29  1  0
  9 30  1  0
 10 31  1  0
 10 32  1  0
 12 33  1  0
M  END
Download

PDB for HMDB0037185 (Rhodinyl formate)

HEADER    PROTEIN                                 06-MAY-13   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   06-MAY-13         0                                  
HETATM    1  C   UNK     0      -9.034  -4.565   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -7.700  -6.875   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -2.365  -6.875   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      -5.033  -5.335   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      -6.366  -4.565   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      -3.699  -4.565   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      -1.032  -4.565   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       0.302  -5.335   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       2.969  -5.335   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      -7.700  -5.335   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      -2.365  -5.335   0.000  0.00  0.00           C+0
HETATM   12  O   UNK     0       4.303  -4.565   0.000  0.00  0.00           O+0
HETATM   13  O   UNK     0       1.636  -4.565   0.000  0.00  0.00           O+0
CONECT    1   10                                                            
CONECT    2   10                                                            
CONECT    3   11                                                            
CONECT    4    5    6                                                       
CONECT    5    4   10                                                       
CONECT    6    4   11                                                       
CONECT    7    8   11                                                       
CONECT    8    7   13                                                       
CONECT    9   12   13                                                       
CONECT   10    1    2    5                                                  
CONECT   11    3    6    7                                                  
CONECT   12    9                                                            
CONECT   13    8    9                                                       
MASTER        0    0    0    0    0    0    0    0   13    0   24    0
END
Download

3D PDB for HMDB0037185 (Rhodinyl formate)

COMPND    HMDB0037185
HETATM    1  C1  UNL     1       4.526  -0.701  -0.093  1.00  0.00           C  
HETATM    2  C2  UNL     1       3.481   0.048   0.184  1.00  0.00           C  
HETATM    3  C3  UNL     1       3.484   1.477  -0.195  1.00  0.00           C  
HETATM    4  C4  UNL     1       2.315  -0.520   0.862  1.00  0.00           C  
HETATM    5  C5  UNL     1       1.035  -0.404   0.030  1.00  0.00           C  
HETATM    6  C6  UNL     1      -0.065  -1.016   0.833  1.00  0.00           C  
HETATM    7  C7  UNL     1      -1.404  -0.992   0.172  1.00  0.00           C  
HETATM    8  C8  UNL     1      -1.432  -1.726  -1.130  1.00  0.00           C  
HETATM    9  C9  UNL     1      -1.986   0.400   0.075  1.00  0.00           C  
HETATM   10  C10 UNL     1      -3.319   0.429  -0.584  1.00  0.00           C  
HETATM   11  O1  UNL     1      -3.895   1.702  -0.697  1.00  0.00           O  
HETATM   12  C11 UNL     1      -4.201   2.465   0.399  1.00  0.00           C  
HETATM   13  O2  UNL     1      -3.977   2.047   1.556  1.00  0.00           O  
HETATM   14  H1  UNL     1       4.566  -1.749   0.166  1.00  0.00           H  
HETATM   15  H2  UNL     1       5.376  -0.261  -0.594  1.00  0.00           H  
HETATM   16  H3  UNL     1       4.159   2.001   0.535  1.00  0.00           H  
HETATM   17  H4  UNL     1       3.998   1.594  -1.182  1.00  0.00           H  
HETATM   18  H5  UNL     1       2.489   1.945  -0.176  1.00  0.00           H  
HETATM   19  H6  UNL     1       2.429  -1.579   1.142  1.00  0.00           H  
HETATM   20  H7  UNL     1       2.091   0.025   1.814  1.00  0.00           H  
HETATM   21  H8  UNL     1       1.160  -0.968  -0.910  1.00  0.00           H  
HETATM   22  H9  UNL     1       0.895   0.669  -0.176  1.00  0.00           H  
HETATM   23  H10 UNL     1       0.202  -2.083   1.010  1.00  0.00           H  
HETATM   24  H11 UNL     1      -0.156  -0.559   1.839  1.00  0.00           H  
HETATM   25  H12 UNL     1      -2.098  -1.556   0.866  1.00  0.00           H  
HETATM   26  H13 UNL     1      -0.952  -1.170  -1.962  1.00  0.00           H  
HETATM   27  H14 UNL     1      -2.464  -2.039  -1.368  1.00  0.00           H  
HETATM   28  H15 UNL     1      -0.842  -2.659  -1.002  1.00  0.00           H  
HETATM   29  H16 UNL     1      -1.307   1.062  -0.522  1.00  0.00           H  
HETATM   30  H17 UNL     1      -2.062   0.877   1.069  1.00  0.00           H  
HETATM   31  H18 UNL     1      -4.076  -0.193  -0.016  1.00  0.00           H  
HETATM   32  H19 UNL     1      -3.326  -0.013  -1.602  1.00  0.00           H  
HETATM   33  H20 UNL     1      -4.643   3.446   0.277  1.00  0.00           H  
CONECT    1    2    2   14   15
CONECT    2    3    4
CONECT    3   16   17   18
CONECT    4    5   19   20
CONECT    5    6   21   22
CONECT    6    7   23   24
CONECT    7    8    9   25
CONECT    8   26   27   28
CONECT    9   10   29   30
CONECT   10   11   31   32
CONECT   11   12
CONECT   12   13   13   33
END
Download

SMILES for HMDB0037185 (Rhodinyl formate)

CC(CCCC(C)=C)CCOC=O
Download

INCHI for HMDB0037185 (Rhodinyl formate)

InChI=1S/C11H20O2/c1-10(2)5-4-6-11(3)7-8-13-9-12/h9,11H,1,4-8H2,2-3H3
Download
View in JSmolView Stereo Labels
Synonyms
ValueSource
Rhodinyl formic acidGenerator
3,7-Dimethyl-7-octen-1-yl formateHMDB
3,7-Dimethyl-7-octen-1-yl methanoateHMDB
7-Octen-1-ol, 3,7-dimethyl-, 1-formateHMDB
7-Octen-1-ol, 3,7-dimethyl-, formateHMDB
FEMA 2984HMDB
3,7-Dimethyloct-7-en-1-yl formic acidGenerator
Chemical FormulaC11H20O2
Average Molecular Weight184.2753
Monoisotopic Molecular Weight184.146329884
IUPAC Name3,7-dimethyloct-7-en-1-yl formate
Traditional Name3,7-dimethyloct-7-en-1-yl formate
CAS Registry Number141-09-3
SMILES
CC(CCCC(C)=C)CCOC=O
InChI Identifier
InChI=1S/C11H20O2/c1-10(2)5-4-6-11(3)7-8-13-9-12/h9,11H,1,4-8H2,2-3H3
InChI KeyVMBKZHMLQXCNCP-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as fatty alcohol esters. These are ester derivatives of a fatty alcohol.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassFatty Acyls
Sub ClassFatty alcohol esters
Direct ParentFatty alcohol esters
Alternative Parents
Substituents
  • Fatty alcohol ester
  • Carboxylic acid ester
  • Monocarboxylic acid or derivatives
  • Carboxylic acid derivative
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Carbonyl group
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External DescriptorsNot Available
Ontology
Physiological effect
Organoleptic effect
Disposition
Biological locationRoute of exposureSource
Process
Naturally occurring process
Role
Biological roleIndustrial application
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.075 g/LALOGPS
logP3.67ALOGPS
logP3.2ChemAxon
logS-3.4ALOGPS
pKa (Strongest Basic)-6.8ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count1ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area26.3 ŲChemAxon
Rotatable Bond Count8ChemAxon
Refractivity54.07 m³·mol⁻¹ChemAxon
Polarizability22.33 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+143.8931661259
DarkChem[M-H]-140.24631661259
DeepCCS[M+H]+143.61230932474
DeepCCS[M-H]-139.93530932474
DeepCCS[M-2H]-177.31730932474
DeepCCS[M+Na]+152.77330932474
AllCCS[M+H]+147.132859911
AllCCS[M+H-H2O]+143.432859911
AllCCS[M+NH4]+150.632859911
AllCCS[M+Na]+151.632859911
AllCCS[M-H]-147.932859911
AllCCS[M+Na-2H]-149.532859911
AllCCS[M+HCOO]-151.332859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Rhodinyl formateCC(CCCC(C)=C)CCOC=O1611.1Standard polar33892256
Rhodinyl formateCC(CCCC(C)=C)CCOC=O1220.1Standard non polar33892256
Rhodinyl formateCC(CCCC(C)=C)CCOC=O1316.8Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Rhodinyl formate GC-MS (Non-derivatized) - 70eV, Positivesplash10-0a4l-9400000000-3931624a660aa51d7fe82017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Rhodinyl formate GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Rhodinyl formate 10V, Positive-QTOFsplash10-000i-1900000000-bed16181360104cf36682016-08-02Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Rhodinyl formate 20V, Positive-QTOFsplash10-000i-8900000000-82b3a8d539811d12cb042016-08-02Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Rhodinyl formate 40V, Positive-QTOFsplash10-066r-9100000000-60945b699b20708b57262016-08-02Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Rhodinyl formate 10V, Negative-QTOFsplash10-001i-1900000000-7315b051ed1b95bd26b62016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Rhodinyl formate 20V, Negative-QTOFsplash10-001l-7900000000-a24f6357d71040cd17222016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Rhodinyl formate 40V, Negative-QTOFsplash10-0006-9300000000-41bfc55f22792a9578932016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Rhodinyl formate 10V, Negative-QTOFsplash10-053i-1900000000-82dc51fdcd58513c14572021-09-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Rhodinyl formate 20V, Negative-QTOFsplash10-0006-9000000000-d948d5d95ae14e701f572021-09-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Rhodinyl formate 40V, Negative-QTOFsplash10-0006-9000000000-20647fba0207a01d78822021-09-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Rhodinyl formate 10V, Positive-QTOFsplash10-001j-9400000000-988c350448271a10f98a2021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Rhodinyl formate 20V, Positive-QTOFsplash10-00lr-9100000000-d4f98478633f668d9a872021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Rhodinyl formate 40V, Positive-QTOFsplash10-014i-9000000000-930a1d7ddcd0c777a90b2021-09-25Wishart LabView Spectrum

IR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+H]+)2023-02-04FELIX labView Spectrum
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+Na]+)2023-02-04FELIX labView Spectrum
Biological Properties
Cellular Locations
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB016187
KNApSAcK IDNot Available
Chemspider ID55044
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound61092
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.