Hmdb loader
Survey
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-12 01:04:09 UTC
Update Date2022-03-07 02:56:15 UTC
HMDB IDHMDB0039567
Secondary Accession Numbers
  • HMDB39567
Metabolite Identification
Common NameBL V
DescriptionCynarasaponin D belongs to the class of organic compounds known as triterpene saponins. These are glycosylated derivatives of triterpene sapogenins. The sapogenin moiety backbone is usually based on the oleanane, ursane, taraxastane, bauerane, lanostane, lupeol, lupane, dammarane, cycloartane, friedelane, hopane, 9b,19-cyclo-lanostane, cycloartane, or cycloartanol skeleton. Cynarasaponin D is an extremely weak basic (essentially neutral) compound (based on its pKa).
Structure
Data?1563863399
Synonyms
ValueSource
3-(Acetyloxy)-6,11,12-trihydroxy-5-(4-hydroxyphenyl)-8-oxatricyclo[7.4.0.0²,⁷]trideca-1(9),2(7),3,5,10,12-hexaen-4-yl acetic acidGenerator
Chemical FormulaC22H16O9
Average Molecular Weight424.357
Monoisotopic Molecular Weight424.07943211
IUPAC Name3-(acetyloxy)-6,11,12-trihydroxy-5-(4-hydroxyphenyl)-8-oxatricyclo[7.4.0.0²,⁷]trideca-1(9),2(7),3,5,10,12-hexaen-4-yl acetate
Traditional Name3-(acetyloxy)-6,11,12-trihydroxy-5-(4-hydroxyphenyl)-8-oxatricyclo[7.4.0.0²,⁷]trideca-1(9),2(7),3,5,10,12-hexaen-4-yl acetate
CAS Registry NumberNot Available
SMILES
CC(=O)OC1=C(OC(C)=O)C(=C(O)C2=C1C1=C(O2)C=C(O)C(O)=C1)C1=CC=C(O)C=C1
InChI Identifier
InChI=1S/C22H16O9/c1-9(23)29-21-17(11-3-5-12(25)6-4-11)19(28)20-18(22(21)30-10(2)24)13-7-14(26)15(27)8-16(13)31-20/h3-8,25-28H,1-2H3
InChI KeyYJCDGKMVAYETOP-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as triterpene saponins. These are glycosylated derivatives of triterpene sapogenins. The sapogenin moiety backbone is usually based on the oleanane, ursane, taraxastane, bauerane, lanostane, lupeol, lupane, dammarane, cycloartane, friedelane, hopane, 9b,19-cyclo-lanostane, cycloartane, or cycloartanol skeleton.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassTerpene glycosides
Direct ParentTriterpene saponins
Alternative Parents
Substituents
  • Triterpene saponin
  • Triterpenoid
  • Steroid
  • 1-o-glucuronide
  • O-glucuronide
  • Glucuronic acid or derivatives
  • Disaccharide
  • Glycosyl compound
  • O-glycosyl compound
  • Beta-hydroxy acid
  • Pyran
  • Oxane
  • Hydroxy acid
  • Dicarboxylic acid or derivatives
  • Secondary alcohol
  • Carboxylic acid ester
  • Organoheterocyclic compound
  • Polyol
  • Oxacycle
  • Carboxylic acid derivative
  • Carboxylic acid
  • Acetal
  • Primary alcohol
  • Organic oxygen compound
  • Alcohol
  • Organic oxide
  • Carbonyl group
  • Hydrocarbon derivative
  • Organooxygen compound
  • Aliphatic heteropolycyclic compound
Molecular FrameworkAliphatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
Role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.18 g/LALOGPS
logP3.72ALOGPS
logP2.8ChemAxon
logS-3.4ALOGPS
pKa (Strongest Acidic)7.53ChemAxon
pKa (Strongest Basic)-3.6ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count4ChemAxon
Polar Surface Area146.66 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity106.55 m³·mol⁻¹ChemAxon
Polarizability41.74 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+197.26731661259
DarkChem[M-H]-191.77731661259
DeepCCS[M+H]+192.87530932474
DeepCCS[M-H]-190.47930932474
DeepCCS[M-2H]-223.36330932474
DeepCCS[M+Na]+198.78730932474
AllCCS[M+H]+198.432859911
AllCCS[M+H-H2O]+195.732859911
AllCCS[M+NH4]+200.932859911
AllCCS[M+Na]+201.632859911
AllCCS[M-H]-197.332859911
AllCCS[M+Na-2H]-196.932859911
AllCCS[M+HCOO]-196.732859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
BL VCC(=O)OC1=C(OC(C)=O)C(=C(O)C2=C1C1=C(O2)C=C(O)C(O)=C1)C1=CC=C(O)C=C15426.3Standard polar33892256
BL VCC(=O)OC1=C(OC(C)=O)C(=C(O)C2=C1C1=C(O2)C=C(O)C(O)=C1)C1=CC=C(O)C=C13461.1Standard non polar33892256
BL VCC(=O)OC1=C(OC(C)=O)C(=C(O)C2=C1C1=C(O2)C=C(O)C(O)=C1)C1=CC=C(O)C=C13831.6Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
BL V,1TMS,isomer #1CC(=O)OC1=C(C2=CC=C(O)C=C2)C(O[Si](C)(C)C)=C2OC3=CC(O)=C(O)C=C3C2=C1OC(C)=O3626.5Semi standard non polar33892256
BL V,1TMS,isomer #2CC(=O)OC1=C(C2=CC=C(O)C=C2)C(O)=C2OC3=CC(O[Si](C)(C)C)=C(O)C=C3C2=C1OC(C)=O3619.9Semi standard non polar33892256
BL V,1TMS,isomer #3CC(=O)OC1=C(C2=CC=C(O)C=C2)C(O)=C2OC3=CC(O)=C(O[Si](C)(C)C)C=C3C2=C1OC(C)=O3626.2Semi standard non polar33892256
BL V,1TMS,isomer #4CC(=O)OC1=C(C2=CC=C(O[Si](C)(C)C)C=C2)C(O)=C2OC3=CC(O)=C(O)C=C3C2=C1OC(C)=O3623.7Semi standard non polar33892256
BL V,2TMS,isomer #1CC(=O)OC1=C(C2=CC=C(O[Si](C)(C)C)C=C2)C(O[Si](C)(C)C)=C2OC3=CC(O)=C(O)C=C3C2=C1OC(C)=O3573.5Semi standard non polar33892256
BL V,2TMS,isomer #2CC(=O)OC1=C(C2=CC=C(O)C=C2)C(O[Si](C)(C)C)=C2OC3=CC(O[Si](C)(C)C)=C(O)C=C3C2=C1OC(C)=O3611.7Semi standard non polar33892256
BL V,2TMS,isomer #3CC(=O)OC1=C(C2=CC=C(O)C=C2)C(O[Si](C)(C)C)=C2OC3=CC(O)=C(O[Si](C)(C)C)C=C3C2=C1OC(C)=O3609.7Semi standard non polar33892256
BL V,2TMS,isomer #4CC(=O)OC1=C(C2=CC=C(O[Si](C)(C)C)C=C2)C(O)=C2OC3=CC(O[Si](C)(C)C)=C(O)C=C3C2=C1OC(C)=O3588.1Semi standard non polar33892256
BL V,2TMS,isomer #5CC(=O)OC1=C(C2=CC=C(O)C=C2)C(O)=C2OC3=CC(O[Si](C)(C)C)=C(O[Si](C)(C)C)C=C3C2=C1OC(C)=O3572.1Semi standard non polar33892256
BL V,2TMS,isomer #6CC(=O)OC1=C(C2=CC=C(O[Si](C)(C)C)C=C2)C(O)=C2OC3=CC(O)=C(O[Si](C)(C)C)C=C3C2=C1OC(C)=O3601.0Semi standard non polar33892256
BL V,3TMS,isomer #1CC(=O)OC1=C(C2=CC=C(O[Si](C)(C)C)C=C2)C(O[Si](C)(C)C)=C2OC3=CC(O[Si](C)(C)C)=C(O)C=C3C2=C1OC(C)=O3692.5Semi standard non polar33892256
BL V,3TMS,isomer #2CC(=O)OC1=C(C2=CC=C(O[Si](C)(C)C)C=C2)C(O[Si](C)(C)C)=C2OC3=CC(O)=C(O[Si](C)(C)C)C=C3C2=C1OC(C)=O3695.9Semi standard non polar33892256
BL V,3TMS,isomer #3CC(=O)OC1=C(C2=CC=C(O)C=C2)C(O[Si](C)(C)C)=C2OC3=CC(O[Si](C)(C)C)=C(O[Si](C)(C)C)C=C3C2=C1OC(C)=O3582.4Semi standard non polar33892256
BL V,3TMS,isomer #4CC(=O)OC1=C(C2=CC=C(O[Si](C)(C)C)C=C2)C(O)=C2OC3=CC(O[Si](C)(C)C)=C(O[Si](C)(C)C)C=C3C2=C1OC(C)=O3590.1Semi standard non polar33892256
BL V,4TMS,isomer #1CC(=O)OC1=C(C2=CC=C(O[Si](C)(C)C)C=C2)C(O[Si](C)(C)C)=C2OC3=CC(O[Si](C)(C)C)=C(O[Si](C)(C)C)C=C3C2=C1OC(C)=O3679.8Semi standard non polar33892256
BL V,1TBDMS,isomer #1CC(=O)OC1=C(C2=CC=C(O)C=C2)C(O[Si](C)(C)C(C)(C)C)=C2OC3=CC(O)=C(O)C=C3C2=C1OC(C)=O3914.6Semi standard non polar33892256
BL V,1TBDMS,isomer #2CC(=O)OC1=C(C2=CC=C(O)C=C2)C(O)=C2OC3=CC(O[Si](C)(C)C(C)(C)C)=C(O)C=C3C2=C1OC(C)=O3868.7Semi standard non polar33892256
BL V,1TBDMS,isomer #3CC(=O)OC1=C(C2=CC=C(O)C=C2)C(O)=C2OC3=CC(O)=C(O[Si](C)(C)C(C)(C)C)C=C3C2=C1OC(C)=O3872.9Semi standard non polar33892256
BL V,1TBDMS,isomer #4CC(=O)OC1=C(C2=CC=C(O[Si](C)(C)C(C)(C)C)C=C2)C(O)=C2OC3=CC(O)=C(O)C=C3C2=C1OC(C)=O3854.7Semi standard non polar33892256
BL V,2TBDMS,isomer #1CC(=O)OC1=C(C2=CC=C(O[Si](C)(C)C(C)(C)C)C=C2)C(O[Si](C)(C)C(C)(C)C)=C2OC3=CC(O)=C(O)C=C3C2=C1OC(C)=O3981.8Semi standard non polar33892256
BL V,2TBDMS,isomer #2CC(=O)OC1=C(C2=CC=C(O)C=C2)C(O[Si](C)(C)C(C)(C)C)=C2OC3=CC(O[Si](C)(C)C(C)(C)C)=C(O)C=C3C2=C1OC(C)=O4032.6Semi standard non polar33892256
BL V,2TBDMS,isomer #3CC(=O)OC1=C(C2=CC=C(O)C=C2)C(O[Si](C)(C)C(C)(C)C)=C2OC3=CC(O)=C(O[Si](C)(C)C(C)(C)C)C=C3C2=C1OC(C)=O4033.2Semi standard non polar33892256
BL V,2TBDMS,isomer #4CC(=O)OC1=C(C2=CC=C(O[Si](C)(C)C(C)(C)C)C=C2)C(O)=C2OC3=CC(O[Si](C)(C)C(C)(C)C)=C(O)C=C3C2=C1OC(C)=O4050.8Semi standard non polar33892256
BL V,2TBDMS,isomer #5CC(=O)OC1=C(C2=CC=C(O)C=C2)C(O)=C2OC3=CC(O[Si](C)(C)C(C)(C)C)=C(O[Si](C)(C)C(C)(C)C)C=C3C2=C1OC(C)=O3993.9Semi standard non polar33892256
BL V,2TBDMS,isomer #6CC(=O)OC1=C(C2=CC=C(O[Si](C)(C)C(C)(C)C)C=C2)C(O)=C2OC3=CC(O)=C(O[Si](C)(C)C(C)(C)C)C=C3C2=C1OC(C)=O4051.9Semi standard non polar33892256
BL V,3TBDMS,isomer #1CC(=O)OC1=C(C2=CC=C(O[Si](C)(C)C(C)(C)C)C=C2)C(O[Si](C)(C)C(C)(C)C)=C2OC3=CC(O[Si](C)(C)C(C)(C)C)=C(O)C=C3C2=C1OC(C)=O4269.6Semi standard non polar33892256
BL V,3TBDMS,isomer #2CC(=O)OC1=C(C2=CC=C(O[Si](C)(C)C(C)(C)C)C=C2)C(O[Si](C)(C)C(C)(C)C)=C2OC3=CC(O)=C(O[Si](C)(C)C(C)(C)C)C=C3C2=C1OC(C)=O4253.4Semi standard non polar33892256
BL V,3TBDMS,isomer #3CC(=O)OC1=C(C2=CC=C(O)C=C2)C(O[Si](C)(C)C(C)(C)C)=C2OC3=CC(O[Si](C)(C)C(C)(C)C)=C(O[Si](C)(C)C(C)(C)C)C=C3C2=C1OC(C)=O4103.2Semi standard non polar33892256
BL V,3TBDMS,isomer #4CC(=O)OC1=C(C2=CC=C(O[Si](C)(C)C(C)(C)C)C=C2)C(O)=C2OC3=CC(O[Si](C)(C)C(C)(C)C)=C(O[Si](C)(C)C(C)(C)C)C=C3C2=C1OC(C)=O4185.6Semi standard non polar33892256
BL V,4TBDMS,isomer #1CC(=O)OC1=C(C2=CC=C(O[Si](C)(C)C(C)(C)C)C=C2)C(O[Si](C)(C)C(C)(C)C)=C2OC3=CC(O[Si](C)(C)C(C)(C)C)=C(O[Si](C)(C)C(C)(C)C)C=C3C2=C1OC(C)=O4371.1Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - BL V GC-MS (Non-derivatized) - 70eV, Positivesplash10-0016-2009000000-aa8634154ef3bcaae73d2017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - BL V GC-MS (3 TMS) - 70eV, Positivesplash10-001l-2000091000-5b413688410909c3a4452017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - BL V GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - BL V 10V, Positive-QTOFsplash10-00pi-0009400000-088d7ab4bcae8ed7ca062016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - BL V 20V, Positive-QTOFsplash10-0159-0009100000-6e6eedc9073817ba58fd2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - BL V 40V, Positive-QTOFsplash10-00di-1009000000-04984ec0fd273cec14332016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - BL V 10V, Negative-QTOFsplash10-0089-3009700000-d9a57313d259d028e2fd2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - BL V 20V, Negative-QTOFsplash10-05ai-3009100000-653013b2ae37197c73292016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - BL V 40V, Negative-QTOFsplash10-0a4u-9116000000-77ac2bdc9c10ff4729d12016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - BL V 10V, Negative-QTOFsplash10-00di-0000900000-c13e901ac926ded7a1ab2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - BL V 20V, Negative-QTOFsplash10-00e9-0009400000-fe8f5abbd254d686ecf62021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - BL V 40V, Negative-QTOFsplash10-0079-0009000000-0d145e1976a5308ddca12021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - BL V 10V, Positive-QTOFsplash10-001c-0009000000-ecac982f759f335044eb2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - BL V 20V, Positive-QTOFsplash10-007o-0009000000-d23578ea4931619e619e2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - BL V 40V, Positive-QTOFsplash10-0609-0119000000-f1e3e12fc20ff6af3f882021-09-23Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB019184
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound131752677
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .