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Record Information

Version

5.0

Status

Expected but not Quantified

Creation Date

2012-09-12 01:23:48 UTC

Update Date

2022-03-07 02:56:22 UTC

HMDB ID

HMDB0039859

Secondary Accession Numbers

HMDB39859

Metabolite Identification

Common Name

Glandulone C

Description

Glandulone C belongs to the class of organic compounds known as sesquiterpenoids. These are terpenes with three consecutive isoprene units. Based on a literature review a small amount of articles have been published on Glandulone C.

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI

HMDB0039859
     RDKit          3D
Glandulone C
 38 38  0  0  0  0  0  0  0  0999 V2000
   -5.5310    0.4631   -1.0654 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0573    0.3193   -0.7925 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3128    1.3674   -0.5285 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8768    1.3285   -0.2503 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7327    1.8214    1.0669 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3008   -0.0192   -0.3047 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1803   -0.2298   -0.0951 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5880   -1.5417   -0.6295 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6278    0.1528    1.2545 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1008   -0.0279    1.5551 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9819    0.7247    0.6990 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9631    0.2087    0.0371 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2991   -1.1950    0.0781 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8069    1.0812   -0.8188 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7628    0.6136   -1.4712 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0108   -1.1049   -0.5686 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4482   -0.9913   -0.8292 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1426   -2.0109   -1.0803 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8554   -0.4332   -1.6195 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6606    1.3617   -1.7172 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1088    0.5687   -0.1326 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7948    2.3597   -0.5122 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3462    1.9964   -0.9641 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0889    1.1161    1.6614 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6286    0.5470   -0.8069 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0527   -1.6719   -1.6213 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6718   -1.5658   -0.9678 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3431   -2.4247   -0.0330 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3973    1.2127    1.5149 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0925   -0.4423    2.0533 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2558   -1.1025    1.6385 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2181    0.3850    2.6100 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8032    1.8131    0.6052 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5804   -1.4960   -0.9785 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5786   -1.9203    0.4000 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2759   -1.2949    0.6238 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6191    2.1435   -0.9020 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5603   -2.1124   -0.5917 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  2  0
  3  4  1  0
  4  5  1  0
  4  6  1  0
  6  7  1  0
  7  8  1  0
  7  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  2  0
 12 13  1  0
 12 14  1  0
 14 15  2  0
  6 16  2  0
 16 17  1  0
 17 18  2  0
 17  2  1  0
  1 19  1  0
  1 20  1  0
  1 21  1  0
  3 22  1  0
  4 23  1  0
  5 24  1  0
  7 25  1  0
  8 26  1  0
  8 27  1  0
  8 28  1  0
  9 29  1  0
  9 30  1  0
 10 31  1  0
 10 32  1  0
 11 33  1  0
 13 34  1  0
 13 35  1  0
 13 36  1  0
 14 37  1  0
 16 38  1  0
M  END


  Mrv0541 02241217322D          

 18 18  0  0  0  0            999 V2000
    2.1033   -1.2371    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1033   -0.4121    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4433    0.0004    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7008   -0.4121    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0416    0.0004    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7008   -0.4121    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7008   -1.2371    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5882    1.2371    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8457    0.8246    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1858    1.2371    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4433    0.8246    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7833    1.2371    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4433    0.0004    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1858   -0.4121    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8457    0.0004    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5882   -0.4121    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8457    0.0004    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5882   -0.4121    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  2 17  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  6 13  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
  9 15  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 11 13  1  0  0  0  0
 13 14  2  0  0  0  0
 14 15  1  0  0  0  0
 15 16  2  0  0  0  0
 17 18  2  0  0  0  0
M  END
> <DATABASE_ID>
HMDB0039859

> <DATABASE_NAME>
hmdb

> <SMILES>
CC(CC\C=C(/C)C=O)C1=CC(=O)C(C)=CC1O

> <INCHI_IDENTIFIER>
InChI=1S/C15H20O3/c1-10(9-16)5-4-6-11(2)13-8-14(17)12(3)7-15(13)18/h5,7-9,11,15,18H,4,6H2,1-3H3/b10-5+

> <INCHI_KEY>
UZLYFZDXWGWUGA-BJMVGYQFSA-N

> <FORMULA>
C15H20O3

> <MOLECULAR_WEIGHT>
248.3175

> <EXACT_MASS>
248.141244506

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_AVERAGE_POLARIZABILITY>
27.58271151783952

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(2E)-6-(6-hydroxy-4-methyl-3-oxocyclohexa-1,4-dien-1-yl)-2-methylhept-2-enal

> <ALOGPS_LOGP>
2.64

> <JCHEM_LOGP>
2.472227781000001

> <ALOGPS_LOGS>
-3.19

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
12.810206362292114

> <JCHEM_PKA_STRONGEST_ACIDIC>
9.918332036312021

> <JCHEM_PKA_STRONGEST_BASIC>
-3.177268826737018

> <JCHEM_POLAR_SURFACE_AREA>
54.37

> <JCHEM_REFRACTIVITY>
74.17859999999997

> <JCHEM_ROTATABLE_BOND_COUNT>
5

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.61e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(2E)-6-(6-hydroxy-4-methyl-3-oxocyclohexa-1,4-dien-1-yl)-2-methylhept-2-enal

> <JCHEM_VEBER_RULE>
0

$$$$

HMDB0039859
     RDKit          3D
Glandulone C
 38 38  0  0  0  0  0  0  0  0999 V2000
   -5.5310    0.4631   -1.0654 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0573    0.3193   -0.7925 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3128    1.3674   -0.5285 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8768    1.3285   -0.2503 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7327    1.8214    1.0669 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3008   -0.0192   -0.3047 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1803   -0.2298   -0.0951 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5880   -1.5417   -0.6295 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6278    0.1528    1.2545 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1008   -0.0279    1.5551 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9819    0.7247    0.6990 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9631    0.2087    0.0371 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2991   -1.1950    0.0781 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8069    1.0812   -0.8188 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7628    0.6136   -1.4712 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0108   -1.1049   -0.5686 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4482   -0.9913   -0.8292 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1426   -2.0109   -1.0803 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8554   -0.4332   -1.6195 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6606    1.3617   -1.7172 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1088    0.5687   -0.1326 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7948    2.3597   -0.5122 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3462    1.9964   -0.9641 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0889    1.1161    1.6614 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6286    0.5470   -0.8069 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0527   -1.6719   -1.6213 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6718   -1.5658   -0.9678 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3431   -2.4247   -0.0330 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3973    1.2127    1.5149 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0925   -0.4423    2.0533 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2558   -1.1025    1.6385 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2181    0.3850    2.6100 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8032    1.8131    0.6052 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5804   -1.4960   -0.9785 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5786   -1.9203    0.4000 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2759   -1.2949    0.6238 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6191    2.1435   -0.9020 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5603   -2.1124   -0.5917 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  2  0
  3  4  1  0
  4  5  1  0
  4  6  1  0
  6  7  1  0
  7  8  1  0
  7  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  2  0
 12 13  1  0
 12 14  1  0
 14 15  2  0
  6 16  2  0
 16 17  1  0
 17 18  2  0
 17  2  1  0
  1 19  1  0
  1 20  1  0
  1 21  1  0
  3 22  1  0
  4 23  1  0
  5 24  1  0
  7 25  1  0
  8 26  1  0
  8 27  1  0
  8 28  1  0
  9 29  1  0
  9 30  1  0
 10 31  1  0
 10 32  1  0
 11 33  1  0
 13 34  1  0
 13 35  1  0
 13 36  1  0
 14 37  1  0
 16 38  1  0
M  END

HEADER    PROTEIN                                 24-FEB-12   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-FEB-12         0                                  
HETATM    1  C   UNK     0       3.926  -2.309   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       3.926  -0.769   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       2.694   0.001   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       1.308  -0.769   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      -0.078   0.001   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      -1.308  -0.769   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      -1.308  -2.309   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      -6.698   2.309   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      -5.312   1.539   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      -4.080   2.309   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      -2.694   1.539   0.000  0.00  0.00           C+0
HETATM   12  O   UNK     0      -1.462   2.309   0.000  0.00  0.00           O+0
HETATM   13  C   UNK     0      -2.694   0.001   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      -4.080  -0.769   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      -5.312   0.001   0.000  0.00  0.00           C+0
HETATM   16  O   UNK     0      -6.698  -0.769   0.000  0.00  0.00           O+0
HETATM   17  C   UNK     0       5.312   0.001   0.000  0.00  0.00           C+0
HETATM   18  O   UNK     0       6.698  -0.769   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3   17                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7   13                                                  
CONECT    7    6                                                            
CONECT    8    9                                                            
CONECT    9    8   10   15                                                  
CONECT   10    9   11                                                       
CONECT   11   10   12   13                                                  
CONECT   12   11                                                            
CONECT   13    6   11   14                                                  
CONECT   14   13   15                                                       
CONECT   15    9   14   16                                                  
CONECT   16   15                                                            
CONECT   17    2   18                                                       
CONECT   18   17                                                            
MASTER        0    0    0    0    0    0    0    0   18    0   36    0
END

COMPND    HMDB0039859
HETATM    1  C1  UNL     1      -5.531   0.463  -1.065  1.00  0.00           C  
HETATM    2  C2  UNL     1      -4.057   0.319  -0.792  1.00  0.00           C  
HETATM    3  C3  UNL     1      -3.313   1.367  -0.529  1.00  0.00           C  
HETATM    4  C4  UNL     1      -1.877   1.328  -0.250  1.00  0.00           C  
HETATM    5  O1  UNL     1      -1.733   1.821   1.067  1.00  0.00           O  
HETATM    6  C5  UNL     1      -1.301  -0.019  -0.305  1.00  0.00           C  
HETATM    7  C6  UNL     1       0.180  -0.230  -0.095  1.00  0.00           C  
HETATM    8  C7  UNL     1       0.588  -1.542  -0.629  1.00  0.00           C  
HETATM    9  C8  UNL     1       0.628   0.153   1.254  1.00  0.00           C  
HETATM   10  C9  UNL     1       2.101  -0.028   1.555  1.00  0.00           C  
HETATM   11  C10 UNL     1       2.982   0.725   0.699  1.00  0.00           C  
HETATM   12  C11 UNL     1       3.963   0.209   0.037  1.00  0.00           C  
HETATM   13  C12 UNL     1       4.299  -1.195   0.078  1.00  0.00           C  
HETATM   14  C13 UNL     1       4.807   1.081  -0.819  1.00  0.00           C  
HETATM   15  O2  UNL     1       5.763   0.614  -1.471  1.00  0.00           O  
HETATM   16  C14 UNL     1      -2.011  -1.105  -0.569  1.00  0.00           C  
HETATM   17  C15 UNL     1      -3.448  -0.991  -0.829  1.00  0.00           C  
HETATM   18  O3  UNL     1      -4.143  -2.011  -1.080  1.00  0.00           O  
HETATM   19  H1  UNL     1      -5.855  -0.433  -1.619  1.00  0.00           H  
HETATM   20  H2  UNL     1      -5.661   1.362  -1.717  1.00  0.00           H  
HETATM   21  H3  UNL     1      -6.109   0.569  -0.133  1.00  0.00           H  
HETATM   22  H4  UNL     1      -3.795   2.360  -0.512  1.00  0.00           H  
HETATM   23  H5  UNL     1      -1.346   1.996  -0.964  1.00  0.00           H  
HETATM   24  H6  UNL     1      -2.089   1.116   1.661  1.00  0.00           H  
HETATM   25  H7  UNL     1       0.629   0.547  -0.807  1.00  0.00           H  
HETATM   26  H8  UNL     1       0.053  -1.672  -1.621  1.00  0.00           H  
HETATM   27  H9  UNL     1       1.672  -1.566  -0.968  1.00  0.00           H  
HETATM   28  H10 UNL     1       0.343  -2.425  -0.033  1.00  0.00           H  
HETATM   29  H11 UNL     1       0.397   1.213   1.515  1.00  0.00           H  
HETATM   30  H12 UNL     1       0.093  -0.442   2.053  1.00  0.00           H  
HETATM   31  H13 UNL     1       2.256  -1.102   1.639  1.00  0.00           H  
HETATM   32  H14 UNL     1       2.218   0.385   2.610  1.00  0.00           H  
HETATM   33  H15 UNL     1       2.803   1.813   0.605  1.00  0.00           H  
HETATM   34  H16 UNL     1       4.580  -1.496  -0.978  1.00  0.00           H  
HETATM   35  H17 UNL     1       3.579  -1.920   0.400  1.00  0.00           H  
HETATM   36  H18 UNL     1       5.276  -1.295   0.624  1.00  0.00           H  
HETATM   37  H19 UNL     1       4.619   2.143  -0.902  1.00  0.00           H  
HETATM   38  H20 UNL     1      -1.560  -2.112  -0.592  1.00  0.00           H  
CONECT    1    2   19   20   21
CONECT    2    3    3   17
CONECT    3    4   22
CONECT    4    5    6   23
CONECT    5   24
CONECT    6    7   16   16
CONECT    7    8    9   25
CONECT    8   26   27   28
CONECT    9   10   29   30
CONECT   10   11   31   32
CONECT   11   12   12   33
CONECT   12   13   14
CONECT   13   34   35   36
CONECT   14   15   15   37
CONECT   16   17   38
CONECT   17   18   18
END

HMDB0039859
     RDKit          3D
Glandulone C
 38 38  0  0  0  0  0  0  0  0999 V2000
   -5.5310    0.4631   -1.0654 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0573    0.3193   -0.7925 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3128    1.3674   -0.5285 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8768    1.3285   -0.2503 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7327    1.8214    1.0669 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3008   -0.0192   -0.3047 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1803   -0.2298   -0.0951 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5880   -1.5417   -0.6295 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6278    0.1528    1.2545 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1008   -0.0279    1.5551 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9819    0.7247    0.6990 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9631    0.2087    0.0371 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2991   -1.1950    0.0781 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8069    1.0812   -0.8188 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7628    0.6136   -1.4712 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0108   -1.1049   -0.5686 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4482   -0.9913   -0.8292 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1426   -2.0109   -1.0803 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8554   -0.4332   -1.6195 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6606    1.3617   -1.7172 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1088    0.5687   -0.1326 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7948    2.3597   -0.5122 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3462    1.9964   -0.9641 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0889    1.1161    1.6614 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6286    0.5470   -0.8069 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0527   -1.6719   -1.6213 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6718   -1.5658   -0.9678 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3431   -2.4247   -0.0330 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3973    1.2127    1.5149 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0925   -0.4423    2.0533 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2558   -1.1025    1.6385 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2181    0.3850    2.6100 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8032    1.8131    0.6052 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5804   -1.4960   -0.9785 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5786   -1.9203    0.4000 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2759   -1.2949    0.6238 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6191    2.1435   -0.9020 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5603   -2.1124   -0.5917 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  2  0
  3  4  1  0
  4  5  1  0
  4  6  1  0
  6  7  1  0
  7  8  1  0
  7  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  2  0
 12 13  1  0
 12 14  1  0
 14 15  2  0
  6 16  2  0
 16 17  1  0
 17 18  2  0
 17  2  1  0
  1 19  1  0
  1 20  1  0
  1 21  1  0
  3 22  1  0
  4 23  1  0
  5 24  1  0
  7 25  1  0
  8 26  1  0
  8 27  1  0
  8 28  1  0
  9 29  1  0
  9 30  1  0
 10 31  1  0
 10 32  1  0
 11 33  1  0
 13 34  1  0
 13 35  1  0
 13 36  1  0
 14 37  1  0
 16 38  1  0
M  END

View in JSmol View Stereo Labels

Synonyms

Not Available

Chemical Formula

C₁₅H₂₀O₃

Average Molecular Weight

248.3175

Monoisotopic Molecular Weight

248.141244506

IUPAC Name

(2E)-6-(6-hydroxy-4-methyl-3-oxocyclohexa-1,4-dien-1-yl)-2-methylhept-2-enal

Traditional Name

(2E)-6-(6-hydroxy-4-methyl-3-oxocyclohexa-1,4-dien-1-yl)-2-methylhept-2-enal

CAS Registry Number

Not Available

SMILES

CC(CC\C=C(/C)C=O)C1=CC(=O)C(C)=CC1O

InChI Identifier

InChI=1S/C15H20O3/c1-10(9-16)5-4-6-11(2)13-8-14(17)12(3)7-15(13)18/h5,7-9,11,15,18H,4,6H2,1-3H3/b10-5+

InChI Key

UZLYFZDXWGWUGA-BJMVGYQFSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as sesquiterpenoids. These are terpenes with three consecutive isoprene units.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Sesquiterpenoids

Direct Parent

Sesquiterpenoids

Alternative Parents

Substituents

Bisabolane sesquiterpenoid
Sesquiterpenoid
Enal
Alpha,beta-unsaturated aldehyde
Cyclic ketone
Secondary alcohol
Ketone
Organic oxygen compound
Organic oxide
Hydrocarbon derivative
Organooxygen compound
Carbonyl group
Aldehyde
Alcohol
Aliphatic homomonocyclic compound

Molecular Framework

Aliphatic homomonocyclic compounds

External Descriptors

Not Available

Ontology

Physiological effect

Not Available

Disposition

Biological location

Cytoplasm (HMDB: HMDB0039859)
Cell membrane (HMDB: HMDB0039859)

Cellular substructure

Extracellular (HMDB: HMDB0039859)
Membrane (HMDB: HMDB0039859)

Route of exposure

Enteral

Ingestion (HMDB: HMDB0039859)

Source

Endogenous

Endogenous (HMDB: HMDB0039859)

Animal

Animal (HMDB: HMDB0039859)

Exogenous

Food

Food (HMDB: HMDB0039859)

Fat and oil

Fats and oils (FooDB: FOOD00864)

Process

Naturally occurring process

Biological process

Chemical reaction

Lipid peroxidation (HMDB: HMDB0039859)

Biochemical process

Fatty acid metabolism (HMDB: HMDB0039859)

Cellular process

Cell signaling (HMDB: HMDB0039859)

Biochemical pathway

Lipid metabolism pathway (HMDB: HMDB0039859)

Role

Biological role

Membrane stabilizer (HMDB: HMDB0039859)

Nutrient

Nutrient (HMDB: HMDB0039859)

Industrial application

Manufacturing industry

Material processing agent

Fluid processing agent

Surfactant

Surfactant (HMDB: HMDB0039859)

Emulsifier (HMDB: HMDB0039859)

Physical Properties

State

Not Available

Experimental Molecular Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Experimental Chromatographic Properties

Not Available

Predicted Molecular Properties

Property	Value	Source
Water Solubility	0.16 g/L	ALOGPS
logP	2.64	ALOGPS
logP	2.47	ChemAxon
logS	-3.2	ALOGPS
pKa (Strongest Acidic)	9.92	ChemAxon
pKa (Strongest Basic)	-3.2	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	3	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	54.37 Å²	ChemAxon
Rotatable Bond Count	5	ChemAxon
Refractivity	74.18 m³·mol⁻¹	ChemAxon
Polarizability	27.58 Å³	ChemAxon
Number of Rings	1	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Predicted Chromatographic Properties

Predicted Collision Cross Sections

Predictor	Adduct Type	CCS Value (Å²)	Reference
DarkChem	[M+H]+	161.528	31661259
DarkChem	[M-H]-	156.946	31661259
DeepCCS	[M+H]+	160.337	30932474
DeepCCS	[M-H]-	157.979	30932474
DeepCCS	[M-2H]-	190.865	30932474
DeepCCS	[M+Na]+	166.43	30932474
AllCCS	[M+H]+	160.7	32859911
AllCCS	[M+H-H2O]+	157.1	32859911
AllCCS	[M+NH4]+	164.2	32859911
AllCCS	[M+Na]+	165.1	32859911
AllCCS	[M-H]-	163.5	32859911
AllCCS	[M+Na-2H]-	164.1	32859911
AllCCS	[M+HCOO]-	164.8	32859911

Predicted Kovats Retention Indices

Underivatized

Metabolite	SMILES	Kovats RI Value	Column Type	Reference
Glandulone C	CC(CC\C=C(/C)C=O)C1=CC(=O)C(C)=CC1O	3442.0	Standard polar	33892256
Glandulone C	CC(CC\C=C(/C)C=O)C1=CC(=O)C(C)=CC1O	2106.5	Standard non polar	33892256
Glandulone C	CC(CC\C=C(/C)C=O)C1=CC(=O)C(C)=CC1O	2130.9	Semi standard non polar	33892256

Derivatized

Derivative Name / Structure	SMILES	Kovats RI Value	Column Type	Reference
Glandulone C,1TMS,isomer #1	CC1=CC(O[Si](C)(C)C)C(C(C)CC/C=C(\C)C=O)=CC1=O	2272.1	Semi standard non polar	33892256
Glandulone C,1TBDMS,isomer #1	CC1=CC(O[Si](C)(C)C(C)(C)C)C(C(C)CC/C=C(\C)C=O)=CC1=O	2511.2	Semi standard non polar	33892256

Spectra

GC-MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted GC-MS	Predicted GC-MS Spectrum - Glandulone C GC-MS (Non-derivatized) - 70eV, Positive	splash10-00lr-8970000000-4312521dc9ad5fdf1922	2017-09-01	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - Glandulone C GC-MS (1 TMS) - 70eV, Positive	splash10-05g0-9152000000-9955f95e4df4002b3980	2017-10-06	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - Glandulone C GC-MS (Non-derivatized) - 70eV, Positive	Not Available	2021-10-12	Wishart Lab	View Spectrum

MS/MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Glandulone C 10V, Positive-QTOF	splash10-001j-0290000000-af29cf152b4ae4d31bc8	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Glandulone C 20V, Positive-QTOF	splash10-01qa-2950000000-38bd66feb7f9ea882e92	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Glandulone C 40V, Positive-QTOF	splash10-0mit-9800000000-4b788d3afc0d814a0b9b	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Glandulone C 10V, Negative-QTOF	splash10-0002-0090000000-c6c707ee717ff551b9b5	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Glandulone C 20V, Negative-QTOF	splash10-0002-0190000000-0e2f72997f5112285673	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Glandulone C 40V, Negative-QTOF	splash10-0ldi-9660000000-2c9e16b5d940b71fdf7a	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Glandulone C 10V, Positive-QTOF	splash10-052b-5940000000-69840ec980cceb0dd7f1	2021-09-23	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Glandulone C 20V, Positive-QTOF	splash10-0pb9-5940000000-fe8ef33fbf2939de8582	2021-09-23	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Glandulone C 40V, Positive-QTOF	splash10-00kb-8930000000-91a0aa5abb9ff453229b	2021-09-23	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Glandulone C 10V, Negative-QTOF	splash10-004j-0090000000-a1453fd852df6244b7ad	2021-09-25	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Glandulone C 20V, Negative-QTOF	splash10-0gb9-0190000000-9c7752af83f02210187b	2021-09-25	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Glandulone C 40V, Negative-QTOF	splash10-0f7k-2930000000-2192ce6ab47a7c19dafe	2021-09-25	Wishart Lab	View Spectrum

Biological Properties

Cellular Locations

Extracellular
Membrane

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Pathways

Not Available

Name	SMPDB/PathBank	KEGG

Normal Concentrations

Not Available

Abnormal Concentrations

Not Available

Associated Disorders and Diseases

Disease References

None

Associated OMIM IDs

None

External Links

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

FDB019517

KNApSAcK ID

Not Available

Chemspider ID

4476470

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

5317654

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

VMH ID

Not Available

MarkerDB ID

Not Available

Good Scents ID

Not Available

References

Synthesis Reference

Not Available

Material Safety Data Sheet (MSDS)

Not Available

General References

Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
(). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.

Showing metabocard for Glandulone C (HMDB0039859)

MOL for HMDB0039859 (Glandulone C)

3D MOL for HMDB0039859 (Glandulone C)

3D SDF for HMDB0039859 (Glandulone C)

3D-SDF for HMDB0039859 (Glandulone C)

PDB for HMDB0039859 (Glandulone C)

3D PDB for HMDB0039859 (Glandulone C)

SMILES for HMDB0039859 (Glandulone C)

INCHI for HMDB0039859 (Glandulone C)

Structure for HMDB0039859 (Glandulone C)

3D Structure for HMDB0039859 (Glandulone C)

Predicted Collision Cross Sections

Predicted Kovats Retention Indices

Underivatized

Derivatized

GC-MS Spectra

MS/MS Spectra