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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-12 01:42:09 UTC
Update Date2023-02-21 17:27:47 UTC
HMDB IDHMDB0040158
Secondary Accession Numbers
  • HMDB40158
Metabolite Identification
Common NameHexyl 2-methyl-3-pentenoate
DescriptionHexyl 2-methyl-3-pentenoate belongs to the class of organic compounds known as fatty acid esters. These are carboxylic ester derivatives of a fatty acid. Based on a literature review a small amount of articles have been published on Hexyl 2-methyl-3-pentenoate.
Structure
Data?1677000467
Synonyms
ValueSource
Hexyl 2-methyl-3-pentenoic acidGenerator
2-Methyl-hexyl ester(e)-3-pentenoic acidHMDB
3-Maleimidobenzoyl N-hydroxysuccinimideHMDB
3-Pentenoic acid, 2-methyl-, hexyl esterHMDB
Hexyl (e)-2-methyl-3-pentenoateHMDB
Hexyl 2-methylpent-3-en-1-OateHMDB
Hexyl (3Z)-2-methylpent-3-enoic acidGenerator
Chemical FormulaC12H22O2
Average Molecular Weight198.3019
Monoisotopic Molecular Weight198.161979948
IUPAC Namehexyl (3Z)-2-methylpent-3-enoate
Traditional Namehexyl (3Z)-2-methylpent-3-enoate
CAS Registry NumberNot Available
SMILES
CCCCCCOC(=O)C(C)\C=C/C
InChI Identifier
InChI=1S/C12H22O2/c1-4-6-7-8-10-14-12(13)11(3)9-5-2/h5,9,11H,4,6-8,10H2,1-3H3/b9-5-
InChI KeyBSKRYZBCMPUFRS-UITAMQMPSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as fatty acid esters. These are carboxylic ester derivatives of a fatty acid.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassFatty Acyls
Sub ClassFatty acid esters
Direct ParentFatty acid esters
Alternative Parents
Substituents
  • Fatty acid ester
  • Carboxylic acid ester
  • Monocarboxylic acid or derivatives
  • Carboxylic acid derivative
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Carbonyl group
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External DescriptorsNot Available
Ontology
Physiological effect
Disposition
Process
Role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.034 g/LALOGPS
logP4.41ALOGPS
logP3.91ChemAxon
logS-3.8ALOGPS
pKa (Strongest Basic)-7.1ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count1ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area26.3 ŲChemAxon
Rotatable Bond Count8ChemAxon
Refractivity60.01 m³·mol⁻¹ChemAxon
Polarizability24.5 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+149.00331661259
DarkChem[M-H]-144.31131661259
DeepCCS[M+H]+156.59430932474
DeepCCS[M-H]-153.12130932474
DeepCCS[M-2H]-190.24430932474
DeepCCS[M+Na]+165.84630932474
AllCCS[M+H]+152.332859911
AllCCS[M+H-H2O]+148.832859911
AllCCS[M+NH4]+155.632859911
AllCCS[M+Na]+156.532859911
AllCCS[M-H]-152.332859911
AllCCS[M+Na-2H]-153.932859911
AllCCS[M+HCOO]-155.632859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Hexyl 2-methyl-3-pentenoateCCCCCCOC(=O)C(C)\C=C/C1624.9Standard polar33892256
Hexyl 2-methyl-3-pentenoateCCCCCCOC(=O)C(C)\C=C/C1310.4Standard non polar33892256
Hexyl 2-methyl-3-pentenoateCCCCCCOC(=O)C(C)\C=C/C1345.3Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Hexyl 2-methyl-3-pentenoate GC-MS (Non-derivatized) - 70eV, Positivesplash10-05mk-9100000000-644fffda01ac4877d2c92017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Hexyl 2-methyl-3-pentenoate GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hexyl 2-methyl-3-pentenoate 10V, Positive-QTOFsplash10-0002-5900000000-e2ef2454ee6ce282380f2017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hexyl 2-methyl-3-pentenoate 20V, Positive-QTOFsplash10-000j-9100000000-1cb21f25997120e222ff2017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hexyl 2-methyl-3-pentenoate 40V, Positive-QTOFsplash10-00ko-9000000000-5b5059ac7d9202ac4aab2017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hexyl 2-methyl-3-pentenoate 10V, Negative-QTOFsplash10-0002-2900000000-e200c2942caa0a7fb0012017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hexyl 2-methyl-3-pentenoate 20V, Negative-QTOFsplash10-03dj-4900000000-6d4aba1e4ec746953b452017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hexyl 2-methyl-3-pentenoate 40V, Negative-QTOFsplash10-014i-9200000000-0b529194eaf091d6f2552017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hexyl 2-methyl-3-pentenoate 10V, Negative-QTOFsplash10-0002-0900000000-b8a63316f67aed1f67452021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hexyl 2-methyl-3-pentenoate 20V, Negative-QTOFsplash10-01ot-3900000000-ab58da4fcdd8d792a0602021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hexyl 2-methyl-3-pentenoate 40V, Negative-QTOFsplash10-014i-9100000000-e6de05f0d229f0f019512021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hexyl 2-methyl-3-pentenoate 10V, Positive-QTOFsplash10-05my-9000000000-5121332ee6c0e7b05cee2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hexyl 2-methyl-3-pentenoate 20V, Positive-QTOFsplash10-014j-9000000000-141bbd1037c11e58f0932021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hexyl 2-methyl-3-pentenoate 40V, Positive-QTOFsplash10-069u-9000000000-ba710100b9d5c4a0da1b2021-09-24Wishart LabView Spectrum

IR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+H]+)2023-02-04FELIX labView Spectrum
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+Na]+)2023-02-04FELIX labView Spectrum
Biological Properties
Cellular Locations
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB019864
KNApSAcK IDNot Available
Chemspider ID32699202
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound71587195
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.