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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2013-07-09 16:18:27 UTC
Update Date2019-07-23 07:15:46 UTC
HMDB IDHMDB0061100
Secondary Accession Numbers
  • HMDB61100
Metabolite Identification
Common Name6-oxo-famciclovir
Description6-oxo-famciclovir is a metabolite of famciclovir. Famciclovir is a guanine analogue antiviral drug used for the treatment of various herpesvirus infections, most commonly for herpes zoster (shingles). It is a prodrug form of penciclovir with improved oral bioavailability. Famciclovir is marketed under the trade name Famvir. On August 24, 2007, the United States Food and Drug Administration approved the first generic version of famciclovir. (Wikipedia)
Structure
Data?1563866146
SynonymsNot Available
Chemical FormulaC14H19N5O5
Average Molecular Weight337.3312
Monoisotopic Molecular Weight337.138618743
IUPAC Name2-[(acetyloxy)methyl]-4-(6-hydroxy-2-imino-3,9-dihydro-2H-purin-9-yl)butyl acetate
Traditional Name2-[(acetyloxy)methyl]-4-(6-hydroxy-2-imino-3H-purin-9-yl)butyl acetate
CAS Registry NumberNot Available
SMILES
CC(=O)OCC(CCN1C=NC2=C1NC(=N)N=C2O)COC(C)=O
InChI Identifier
InChI=1S/C14H19N5O5/c1-8(20)23-5-10(6-24-9(2)21)3-4-19-7-16-11-12(19)17-14(15)18-13(11)22/h7,10H,3-6H2,1-2H3,(H3,15,17,18,22)
InChI KeyKQURMIWGELPUHQ-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as hypoxanthines. Hypoxanthines are compounds containing the purine derivative 1H-purin-6(9H)-one. Purine is a bicyclic aromatic compound made up of a pyrimidine ring fused to an imidazole ring.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassImidazopyrimidines
Sub ClassPurines and purine derivatives
Direct ParentHypoxanthines
Alternative Parents
Substituents
  • 6-oxopurine
  • Hypoxanthine
  • Aminopyrimidine
  • Pyrimidone
  • Pyrimidine
  • Dicarboxylic acid or derivatives
  • N-substituted imidazole
  • Azole
  • Heteroaromatic compound
  • Vinylogous amide
  • Imidazole
  • Amino acid or derivatives
  • Carboxylic acid ester
  • Carboxylic acid derivative
  • Azacycle
  • Organic nitrogen compound
  • Organonitrogen compound
  • Organooxygen compound
  • Primary amine
  • Hydrocarbon derivative
  • Carbonyl group
  • Organic oxide
  • Organopnictogen compound
  • Organic oxygen compound
  • Amine
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.81 g/LALOGPS
logP-0.07ALOGPS
logP-0.79ChemAxon
logS-2.6ALOGPS
pKa (Strongest Acidic)6.25ChemAxon
pKa (Strongest Basic)5.16ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count7ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area138.89 ŲChemAxon
Rotatable Bond Count9ChemAxon
Refractivity93.91 m³·mol⁻¹ChemAxon
Polarizability33.26 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+179.78231661259
DarkChem[M-H]-177.30931661259
DeepCCS[M+H]+165.25930932474
DeepCCS[M-H]-162.90130932474
DeepCCS[M-2H]-195.98630932474
DeepCCS[M+Na]+171.35230932474
AllCCS[M+H]+174.832859911
AllCCS[M+H-H2O]+172.032859911
AllCCS[M+NH4]+177.432859911
AllCCS[M+Na]+178.232859911
AllCCS[M-H]-176.432859911
AllCCS[M+Na-2H]-176.532859911
AllCCS[M+HCOO]-176.732859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
6-oxo-famciclovirCC(=O)OCC(CCN1C=NC2=C1NC(=N)N=C2O)COC(C)=O3796.8Standard polar33892256
6-oxo-famciclovirCC(=O)OCC(CCN1C=NC2=C1NC(=N)N=C2O)COC(C)=O2738.8Standard non polar33892256
6-oxo-famciclovirCC(=O)OCC(CCN1C=NC2=C1NC(=N)N=C2O)COC(C)=O3014.1Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
6-oxo-famciclovir,1TMS,isomer #1CC(=O)OCC(CCN1C=NC2=C1[NH]C(=N)N=C2O[Si](C)(C)C)COC(C)=O2785.0Semi standard non polar33892256
6-oxo-famciclovir,1TMS,isomer #2CC(=O)OCC(CCN1C=NC2=C1N([Si](C)(C)C)C(=N)N=C2O)COC(C)=O2920.0Semi standard non polar33892256
6-oxo-famciclovir,1TMS,isomer #3CC(=O)OCC(CCN1C=NC2=C1[NH]C(=N[Si](C)(C)C)N=C2O)COC(C)=O2784.6Semi standard non polar33892256
6-oxo-famciclovir,2TMS,isomer #1CC(=O)OCC(CCN1C=NC2=C1[NH]C(=N[Si](C)(C)C)N=C2O[Si](C)(C)C)COC(C)=O2705.4Semi standard non polar33892256
6-oxo-famciclovir,2TMS,isomer #1CC(=O)OCC(CCN1C=NC2=C1[NH]C(=N[Si](C)(C)C)N=C2O[Si](C)(C)C)COC(C)=O2884.3Standard non polar33892256
6-oxo-famciclovir,2TMS,isomer #1CC(=O)OCC(CCN1C=NC2=C1[NH]C(=N[Si](C)(C)C)N=C2O[Si](C)(C)C)COC(C)=O4487.6Standard polar33892256
6-oxo-famciclovir,2TMS,isomer #2CC(=O)OCC(CCN1C=NC2=C1N([Si](C)(C)C)C(=N)N=C2O[Si](C)(C)C)COC(C)=O2836.2Semi standard non polar33892256
6-oxo-famciclovir,2TMS,isomer #2CC(=O)OCC(CCN1C=NC2=C1N([Si](C)(C)C)C(=N)N=C2O[Si](C)(C)C)COC(C)=O2783.3Standard non polar33892256
6-oxo-famciclovir,2TMS,isomer #2CC(=O)OCC(CCN1C=NC2=C1N([Si](C)(C)C)C(=N)N=C2O[Si](C)(C)C)COC(C)=O4503.3Standard polar33892256
6-oxo-famciclovir,2TMS,isomer #3CC(=O)OCC(CCN1C=NC2=C1N([Si](C)(C)C)C(=N[Si](C)(C)C)N=C2O)COC(C)=O2876.7Semi standard non polar33892256
6-oxo-famciclovir,2TMS,isomer #3CC(=O)OCC(CCN1C=NC2=C1N([Si](C)(C)C)C(=N[Si](C)(C)C)N=C2O)COC(C)=O2859.3Standard non polar33892256
6-oxo-famciclovir,2TMS,isomer #3CC(=O)OCC(CCN1C=NC2=C1N([Si](C)(C)C)C(=N[Si](C)(C)C)N=C2O)COC(C)=O4274.4Standard polar33892256
6-oxo-famciclovir,3TMS,isomer #1CC(=O)OCC(CCN1C=NC2=C1N([Si](C)(C)C)C(=N[Si](C)(C)C)N=C2O[Si](C)(C)C)COC(C)=O2825.1Semi standard non polar33892256
6-oxo-famciclovir,3TMS,isomer #1CC(=O)OCC(CCN1C=NC2=C1N([Si](C)(C)C)C(=N[Si](C)(C)C)N=C2O[Si](C)(C)C)COC(C)=O2851.4Standard non polar33892256
6-oxo-famciclovir,3TMS,isomer #1CC(=O)OCC(CCN1C=NC2=C1N([Si](C)(C)C)C(=N[Si](C)(C)C)N=C2O[Si](C)(C)C)COC(C)=O4027.2Standard polar33892256
6-oxo-famciclovir,1TBDMS,isomer #1CC(=O)OCC(CCN1C=NC2=C1[NH]C(=N)N=C2O[Si](C)(C)C(C)(C)C)COC(C)=O2943.3Semi standard non polar33892256
6-oxo-famciclovir,1TBDMS,isomer #2CC(=O)OCC(CCN1C=NC2=C1N([Si](C)(C)C(C)(C)C)C(=N)N=C2O)COC(C)=O3077.0Semi standard non polar33892256
6-oxo-famciclovir,1TBDMS,isomer #3CC(=O)OCC(CCN1C=NC2=C1[NH]C(=N[Si](C)(C)C(C)(C)C)N=C2O)COC(C)=O3026.8Semi standard non polar33892256
6-oxo-famciclovir,2TBDMS,isomer #1CC(=O)OCC(CCN1C=NC2=C1[NH]C(=N[Si](C)(C)C(C)(C)C)N=C2O[Si](C)(C)C(C)(C)C)COC(C)=O3103.3Semi standard non polar33892256
6-oxo-famciclovir,2TBDMS,isomer #1CC(=O)OCC(CCN1C=NC2=C1[NH]C(=N[Si](C)(C)C(C)(C)C)N=C2O[Si](C)(C)C(C)(C)C)COC(C)=O3292.6Standard non polar33892256
6-oxo-famciclovir,2TBDMS,isomer #1CC(=O)OCC(CCN1C=NC2=C1[NH]C(=N[Si](C)(C)C(C)(C)C)N=C2O[Si](C)(C)C(C)(C)C)COC(C)=O4394.7Standard polar33892256
6-oxo-famciclovir,2TBDMS,isomer #2CC(=O)OCC(CCN1C=NC2=C1N([Si](C)(C)C(C)(C)C)C(=N)N=C2O[Si](C)(C)C(C)(C)C)COC(C)=O3140.1Semi standard non polar33892256
6-oxo-famciclovir,2TBDMS,isomer #2CC(=O)OCC(CCN1C=NC2=C1N([Si](C)(C)C(C)(C)C)C(=N)N=C2O[Si](C)(C)C(C)(C)C)COC(C)=O3181.2Standard non polar33892256
6-oxo-famciclovir,2TBDMS,isomer #2CC(=O)OCC(CCN1C=NC2=C1N([Si](C)(C)C(C)(C)C)C(=N)N=C2O[Si](C)(C)C(C)(C)C)COC(C)=O4375.8Standard polar33892256
6-oxo-famciclovir,2TBDMS,isomer #3CC(=O)OCC(CCN1C=NC2=C1N([Si](C)(C)C(C)(C)C)C(=N[Si](C)(C)C(C)(C)C)N=C2O)COC(C)=O3237.0Semi standard non polar33892256
6-oxo-famciclovir,2TBDMS,isomer #3CC(=O)OCC(CCN1C=NC2=C1N([Si](C)(C)C(C)(C)C)C(=N[Si](C)(C)C(C)(C)C)N=C2O)COC(C)=O3264.9Standard non polar33892256
6-oxo-famciclovir,2TBDMS,isomer #3CC(=O)OCC(CCN1C=NC2=C1N([Si](C)(C)C(C)(C)C)C(=N[Si](C)(C)C(C)(C)C)N=C2O)COC(C)=O4148.4Standard polar33892256
6-oxo-famciclovir,3TBDMS,isomer #1CC(=O)OCC(CCN1C=NC2=C1N([Si](C)(C)C(C)(C)C)C(=N[Si](C)(C)C(C)(C)C)N=C2O[Si](C)(C)C(C)(C)C)COC(C)=O3317.9Semi standard non polar33892256
6-oxo-famciclovir,3TBDMS,isomer #1CC(=O)OCC(CCN1C=NC2=C1N([Si](C)(C)C(C)(C)C)C(=N[Si](C)(C)C(C)(C)C)N=C2O[Si](C)(C)C(C)(C)C)COC(C)=O3423.3Standard non polar33892256
6-oxo-famciclovir,3TBDMS,isomer #1CC(=O)OCC(CCN1C=NC2=C1N([Si](C)(C)C(C)(C)C)C(=N[Si](C)(C)C(C)(C)C)N=C2O[Si](C)(C)C(C)(C)C)COC(C)=O4013.6Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - 6-oxo-famciclovir GC-MS (Non-derivatized) - 70eV, Positivesplash10-01r6-9881000000-7b9ac30f11371010ebdb2017-09-20Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 6-oxo-famciclovir GC-MS (1 TMS) - 70eV, Positivesplash10-0fdo-8149000000-28c0e149facf37e1f9d02017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 6-oxo-famciclovir GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-oxo-famciclovir 10V, Positive-QTOFsplash10-002r-0079000000-d92c38520a4531bff2c92017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-oxo-famciclovir 20V, Positive-QTOFsplash10-0fb9-0961000000-432457b11ec0e8d5d92d2017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-oxo-famciclovir 40V, Positive-QTOFsplash10-0w4i-1920000000-d93419f4384fe5413ea52017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-oxo-famciclovir 10V, Negative-QTOFsplash10-000l-4019000000-78cc30d6fa88605159e42017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-oxo-famciclovir 20V, Negative-QTOFsplash10-0pb9-8922000000-f09fc841b532c140b35a2017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-oxo-famciclovir 40V, Negative-QTOFsplash10-0a4l-7900000000-23f1ad945928a2e9605d2017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-oxo-famciclovir 10V, Negative-QTOFsplash10-0a4i-9010000000-efc38afcf07ef2fd57402021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-oxo-famciclovir 20V, Negative-QTOFsplash10-0a4i-9020000000-ee89bc0a745d3ae6fa112021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-oxo-famciclovir 40V, Negative-QTOFsplash10-0a4l-9420000000-384a9022a2c79bb134352021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-oxo-famciclovir 10V, Positive-QTOFsplash10-000i-0009000000-67c62c1a10129159e20f2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-oxo-famciclovir 20V, Positive-QTOFsplash10-0079-0249000000-a6ca87bb64f15b30dfd52021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-oxo-famciclovir 40V, Positive-QTOFsplash10-0udi-0930000000-740ad3c85b5df3b378722021-09-22Wishart LabView Spectrum

NMR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted 1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Cytoplasm
Biospecimen Locations
  • Blood
  • Urine
Tissue Locations
  • Kidney
  • Liver
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodExpected but not QuantifiedNot QuantifiedNot AvailableNot AvailableNormal
      Not Available
details
UrineExpected but not QuantifiedNot QuantifiedNot AvailableNot AvailableNormal
      Not Available
details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound11724611
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General ReferencesNot Available