Hmp_logo

Human Metabolome Database Version 3.5

HMDB has recently undergone some major changes, if you are experiencing problems please click here to provide us with feedback.

Browsing metabolites

Filter metabolites by status:

Filter by biofluid:

Filter metabolites by origin:

Select Fields to Export from Metabolite

Select Fields to Export from Taxonomy

Select Fields to Export from Ontology

Select Fields to Export from Experimental Property Set

Select Fields to Export from Proteins

Hint Click on a column header to sort by that column. Click again to reverse the order.

HMDB IDDouble
CAS Number
NameDouble Structure FormulaDouble
Average MassDouble
Mono MassDouble
Biofluid Location
HMDB00460
77059-13-3
7-Hydroxy-3-oxocholanoic acid Thumb C24H38O4
390.5561
390.277009704
HMDB00462
97-59-6
Allantoin Thumb C4H6N4O3
158.1154
158.043990078
  • Cerebrospinal Fluid (CSF)
  • Urine
  • Blood
HMDB00464
7440-70-2
Calcium Thumb Ca
40.078
39.962591155
  • Cerebrospinal Fluid (CSF)
  • Blood
  • Urine
HMDB00466
83-34-1
3-Methylindole Thumb C9H9N
131.1745
131.073499293
HMDB00467
4651-67-6
Nutriacholic acid Thumb C24H38O4
390.5561
390.277009704
HMDB00468
22150-76-1
Biopterin Thumb C9H11N5O3
237.2153
237.086189243
  • Cerebrospinal Fluid (CSF)
  • Blood
  • Cellular Cytoplasm
  • Urine
HMDB00469
4433-40-3
5-Hydroxymethyluracil Thumb C5H6N2O3
142.1127
142.037842068
  • Blood
  • Urine
HMDB00472
4350-09-8
5-Hydroxy-L-tryptophan Thumb C11H12N2O3
220.2246
220.08479226
  • Blood
  • Urine
  • Cerebrospinal Fluid (CSF)
HMDB00473
938-55-6
6-Dimethylaminopurine Thumb C7H9N5
163.1799
163.085795313
  • Blood
HMDB00474
78-93-3
Butanone Thumb C4H8O
72.1057
72.057514878
  • Blood
  • Urine
HMDB00476
88179-71-9
3-Oxo-4,6-choladienoic acid Thumb C24H34O3
370.525
370.250794954
HMDB00477
28290-73-5
7Z,10Z-Hexadecadienoic acid Thumb C16H28O2
252.3923
252.20893014
HMDB00478
1912-55-6
Allodeoxycholic acid Thumb C24H40O4
392.572
392.292659768
HMDB00479
368-16-1
3-Methylhistidine Thumb C7H11N3O2
169.1811
169.085126611
  • Urine
  • Blood
  • Cerebrospinal Fluid (CSF)
HMDB00481
16220-07-8
Allopurinol riboside Thumb C10H12N4O5
268.2261
268.080769514
  • Blood
HMDB00482
124-07-2
Caprylic acid Thumb C8H16O2
144.2114
144.115029756
  • Cerebrospinal Fluid (CSF)
  • Blood
  • Urine
HMDB00483
59906-15-9
5b-Cholestane-3a,7a,12a,23S,25-pentol Thumb C27H48O5
452.667
452.350174646
HMDB00484
121-34-6
Vanillic acid Thumb C8H8O4
168.1467
168.042258744
  • Urine
  • Blood
HMDB00486
17173-14-7
7-Hydroxyoctanoic acid Thumb C8H16O3
160.2108
160.109944378
  • Urine
HMDB00488
69853-43-6
4E,15Z-Bilirubin IXa Thumb C33H36N4O6
584.6621
584.263484904
HMDB00489
2776-93-4
Aspartylglycosamine Thumb C12H21N3O8
335.3104
335.132864663
  • Urine
HMDB00490
53-42-9
Etiocholanolone Thumb C19H30O2
290.4403
290.224580204
  • Blood
  • Urine
HMDB00491
1460-34-0
3-Methyl-2-oxovaleric acid Thumb C6H10O3
130.1418
130.062994186
  • Urine
  • Blood
  • Cerebrospinal Fluid (CSF)
HMDB00492
16887-00-6
Chlorine Thumb Cl
35.453
34.968852707
  • Cerebrospinal Fluid (CSF)
  • Blood
  • Urine
HMDB00493
571-20-0
5a-Androstane-3b,17b-diol Thumb C19H32O2
292.4562
292.240230268
  • Blood