Showing Protein Protocadherin beta-5 (HMDBP07895)
Identification | ||||||||||||||||
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HMDB Protein ID | HMDBP07895 | |||||||||||||||
Secondary Accession Numbers |
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Name | Protocadherin beta-5 | |||||||||||||||
Synonyms |
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Gene Name | PCDHB5 | |||||||||||||||
Protein Type | Unknown | |||||||||||||||
Biological Properties | ||||||||||||||||
General Function | Involved in calcium ion binding | |||||||||||||||
Specific Function | Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain | |||||||||||||||
Pathways | Not Available | |||||||||||||||
Reactions | Not Available | |||||||||||||||
GO Classification |
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Cellular Location |
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Gene Properties | ||||||||||||||||
Chromosome Location | Chromosome:5 | |||||||||||||||
Locus | 5q31 | |||||||||||||||
SNPs | PCDHB5 | |||||||||||||||
Gene Sequence |
>2388 bp ATGGAGACTGCGCTAGCAAAAACGCCACAGAAAAGGCAAGTTATGTTTCTTGCTATATTG TTGCTTTTGTGGGAGGCTGGCTCTGAGGCAGTTAGGTATTCCATACCAGAAGAAACAGAA AGTGGCTATTCTGTGGCCAACCTGGCAAAAGACCTGGGTCTTGGGGTGGGGGAACTGGCC ACTCGGGGCGCGCGAATGCATTACAAAGGAAACAAAGAGCTCTTGCAGCTTGATATAAAG ACCGGCAATTTGCTTCTATATGAAAAACTAGACCGGGAGGTGATGTGCGGGGCGACAGAA CCCTGTATATTGCATTTCCAGCTCTTACTAGAAAATCCAGTGCAGTTTTTTCAAACTGAT CTGCAGCTCACAGATATAAATGACCATGCCCCAGAGTTCCCAGAGAAGGAAATGCTCCTA AAAATCCCAGAGAGCACCCAGCCAGGGACTGTGTTTCCCTTAAAAATAGCCCAGGACTTT GACATAGGTAGCAACACTGTTCAGAACTACACAATCAGCCCAAATTCACACTTTCATGTT GCTACGCATAATCGCGGAGATGGCAGAAAATACCCAGAGCTGGTGCTGGACAAAGCGCTG GACCGGGAGGAGCGGCCTGAGCTCAGCTTAACACTCACTGCACTGGACGGTGGGGCTCCG CCCAGGTCCGGGACCACCACAATTCGCATTGTCGTCTTGGATAATAATGACAACGCCCCC GAATTTTTACAATCATTCTATGAGGTACAGGTGCCCGAGAACAGCCCCCTTAACTCCTTA GTTGTCGTTGTCTCCGCTCGAGATTTAGATGCAGGAGCATATGGGAGTGTAGCCTATGCT CTATTCCAAGGCGATGAAGTTACTCAACCATTTGTAATAGACGAGAAAACAGCAGAAATT CGCCTGAAAAGGGCATTGGATTTCGAGGCAACTCCATATTATAACGTGGAAATTGTAGCC ACAGATGGTGGGGGCCTTTCAGGAAAATGCACTGTGGCTATAGAAGTGGTGGATGTGAAT GACAACGCCCCTGAACTCACCATGTCTACGCTCTCCAGCCCTACCCCAGAAAATGCCCCG GAAACTGTAGTTGCCGTTTTCAGTGTTTCTGATCCAGACTCCGGGGACAACGGTAGGATG ATTTGCTCCATCCAGAATGATCTCCCCTTTCTTTTGAAGCCCACATTAAAAAACTTTTAC ACCCTAGTGACACAGAGAACACTGGACAGAGAGAGCCAAGCCGAGTACAACATCACCATC ACTGTCACCGACATGGGGACACCCAGGCTGAAAACCGAGCACAACATAACGGTCCTGGTC TCCGACGTCAATGACAACGCCCCCGCCTTCACCCAAACCTCCTACACCCTGTTCGTCCGA GAGAACAACAGCCCCGCCCTGCACATCGGCAGTGTCAGCGCCACAGACAGAGACTCAGGC ACCAACGCCCAGGTCACCTACTCGCTGCTGCCGCCCCAGAACCCACACCTGCGCCTCGCC TCCCTGGTCTCCATCAACGCGGACAACGGCCACCTGTTTGCCCTCAGGTCGCTGGACTAC GAGGCCCTGCAGGCGTTCGAGTTCCGCGTGGGAGCCACAGACCGCGGCTCCCCGGCGCTG AGCAGCGAGGCGCTGGTGCGCGTGCTGGTGCTGGACGCCAACGACAACTCGCCCTTCGTG CTGTATCCGCTGCAGAACGGCTCGGCGCCTTGCACCGAGCTGGTGCCCCGGGCGGCCGAG CCGGGCTACCTGGTGACCAAGGTGGTGGCGGTGGACGGCGACTCGGGCCAGAACGCCTGG CTGTCGTACCAGCTGCTCAAGGCCACGGAGCCCGGGCTGTTCAGCATGTGGGCGCACAAT GGCGAGGTGCGCACCGCCAGGCTGCTGAGCGAGCGCGACGCGGCCAAGCACAGGCTGGTG GTGCTGGTCAAGGACAATGGCGAGCCTCCGCGCTCGGCCACCGCCACGCTGCACGTGCTC CTGGTGGACGGCTTCTCCCAGCCCTACCTGCCGCTGCCGGAGGCGGCCCCGGCCCAGGCC CAGGCCGACTCGCTCACTGTCTACCTGGTGGTGGCATTGGCCTCGGTGTCGTCGCTCTTC CTCTTTTCGGTGCTCCTGTTCGTGGCAGTGCGGCTGTGCAGGAGGAGCAGGGCGGCCTCG GTCGGTCGCTGCTCGGTGCCCGAGGGCCCCTTTCCAGGGCATCTGGTGGACGTGAGCGGC ACCGGGACCCTATCCCAGAGCTACCACTACGAGGTGTGTTTGACCGGAGACTCAGGGGCC GGCGAGTTCAAGTTCCTGAAGCCGATTATTCCTAACCTTTTGCCCCAGGGCGCTGGTGAA GAAATAGGGAAAACTGCTGCCTTCCGGAATAGCTTTGGATTAAATTAG |
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Protein Properties | ||||||||||||||||
Number of Residues | 795 | |||||||||||||||
Molecular Weight | 86421.8 | |||||||||||||||
Theoretical pI | 4.62 | |||||||||||||||
Pfam Domain Function | ||||||||||||||||
Signals |
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Transmembrane Regions |
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Protein Sequence |
>Protocadherin beta-5 METALAKTPQKRQVMFLAILLLLWEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELA TRGARMHYKGNKELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTD LQLTDINDHAPEFPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHV ATHNRGDGRKYPELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAP EFLQSFYEVQVPENSPLNSLVVVVSARDLDAGAYGSVAYALFQGDEVTQPFVIDEKTAEI RLKRALDFEATPYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENAP ETVVAVFSVSDPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNITI TVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSG TNAQVTYSLLPPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPAL SSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAW LSYQLLKATEPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVL LVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAAS VGRCSVPEGPFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKPIIPNLLPQGAGE EIGKTAAFRNSFGLN |
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External Links | ||||||||||||||||
GenBank ID Protein | 33150746 | |||||||||||||||
UniProtKB/Swiss-Prot ID | Q9Y5E4 | |||||||||||||||
UniProtKB/Swiss-Prot Entry Name | PCDB5_HUMAN | |||||||||||||||
PDB IDs | Not Available | |||||||||||||||
GenBank Gene ID | AF134474 | |||||||||||||||
GeneCard ID | PCDHB5 | |||||||||||||||
GenAtlas ID | PCDHB5 | |||||||||||||||
HGNC ID | HGNC:8690 | |||||||||||||||
References | ||||||||||||||||
General References |
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