Hmdb loader
Survey
Identification
HMDB Protein ID HMDBP07911
Secondary Accession Numbers
  • 13622
Name Protocadherin gamma-A2
Synonyms
  1. PCDH-gamma-A2
Gene Name PCDHGA2
Protein Type Unknown
Biological Properties
General Function Involved in calcium ion binding
Specific Function Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain
Pathways Not Available
Reactions Not Available
GO Classification
Component
membrane
cell part
plasma membrane
Function
ion binding
cation binding
metal ion binding
binding
calcium ion binding
Process
cell adhesion
cellular process
cell-cell adhesion
homophilic cell adhesion
Cellular Location
  1. Cell membrane
  2. Single-pass type I membrane protein
Gene Properties
Chromosome Location Chromosome:5
Locus 5q31
SNPs PCDHGA2
Gene Sequence
>2799 bp
ATGGCGGCTCTGCAAAAGTTGCCACACTGCAGAAAGCTGGTCCTGCTGTGCTTCCTTTTG
GCGACCCTGTGGGAGGCCAGGGCCGGGCAGATTCGCTATTCTGTGCGGGAAGAGATCGAC
AGAGGCTCCTTCGTAGGCAACATCGCCAAGGACTTGGGTTTGGAGCCCCTGGCACTGGCA
GAGCAGGGAGTCCGCATCGTCTCCAGAGGTAGGTCCCAGCTCTTTGCTCTGAACCCGCGA
AGCGGCAGCTTGGTCACTGCGAACAGGATAGACCGGGAGGAGCTCTGCGCTCAGAGCGCA
CCCTGTCTGTTGAATTTTAACATTCTGCTGGAGGATAAATTGACTATTTATTCAGTAGAG
GTGGAAATAACAGATATTAACGATAATGCCCCTCGCTTTGGAGTAGAGGAACTGGAGCTA
AAAATCAGTGAAACCACTACGCCAGGATTCCGGATTCCTCTTAAGAATGCGCATGATGCA
GACGTAGGTGAGAACGCCCTTCAGAAGTACGCACTCAACCCAAATGACCACTTCTCCCTG
GACGTGCGAAGGGGAGCTGATGGGAACAAGTACCCAGAACTGGTGCTGGAGCGCTCTCTG
GACCGCGAGGAAGAGGCTGTTCACCACCTCGTTCTCGTGGCTTCTGATGGGGGTGACCCA
GTGCTATCTGGCACCTCCCGCATCTGCGTGAAGGTCCTGGATGCGAACGACAATGCGCCT
GTTTTTACACAGCCCGAGTACCGCATAAGCATTCCGGAGAATACGCTCGTGGGCACCCGG
ATACTCACGGTGACCGCCACTGACGCAGATGAGGGCTACTACGCTCAAGTGGTATATTTT
CTAGAGAAAAGCCCTGGAGAAACCTCAGAGGTATTTGAGCTTAAGTCAACATCTGGAGAA
CTGACAATCATAAAAGATCTAGATTATGAGGATGCTACATTCCATGAAATTGATATTGAA
GCTCAGGATGGTCCGGGCCTTCTAACCAGAGCGAAGGTTATCGTCACGGTTCTGGATGTG
AATGACAATGCCCCAGAATTTTACATGACATCTGCTACTAGCTCAGTTTCTGAAGACTCT
CTTCCAGGAACCATAATTGGGCTTTTTAATGTACATGATAGAGACTCTGGGCAGAACGCA
TTCACCACCTGTTCACTCCCCGAGGATCTTCCTTTTAAGTTAGAAAAGTCAGTAGACAAT
TACTACCGACTGGTTACAACCAGAGCCCTTGACAGGGAACAGTTTTCCTTTTACAACATC
ACTCTAACCGCTAAAGATGGAGGGAACCCCTCCCTGTCCACGGATGCTCACATTTTGCTC
CAGGTGGCAGACATCAACGACAACGCACCCGCCTTCTCCCGCACATCCTACTCCACCTAC
ATTCCCGAAAACAACCCCAGAGGAGCCTCTGTCTTCTCAGTGACGGCCCATGACCCCGAC
AGCAACGACAATGCTCATGTAACTTACTCTTTCGCGGAGGACACTGTTCAGGGGGCACCC
TTATCCTCTTACATCTCTATCAACTCCGACACTGGAGTACTCTATGCACTGCGCTCCTTT
GATTATGAGCAGTTGCGAGACTTGCAAGTGTGGGTGATAGCGCGGGACAGCGGGAACCCT
CCACTCAGTAGCAATGTATCATTAAGCCTGTTCGTGCTGGACCAGAACGACAACGCGCCC
GAGATCCTGTACCCTGCCTTCCCCACAGACGGTTCCACTGGCGTGGAGCTGGCGCCCCGC
TCCGCAGAGCCCGGCTACCTGGTGACCAAGGTGGTGGCGGTGGACAGAGACTCGGGCCAG
AACGCCTGGCTGTCTTACCACCTGCTCAAGGCCAGCGAGCCGGGACTCTTCTCGGTGGGT
CTGCACACGGGCGAGGTGCGCACGGCGCGAGCCCTGCTGGACAGAGACGCGCTCAAGCAG
AGCCTCGTGGTGGCCATCCAGGACCACGGCCAGCCCCCTCTCTCCGCCACTGTCACGCTC
ACCGTGGCCGTGGCCGACAGGATCCCCGACATCCTGGCCGACCTGGGCAGCCTCGAGCCC
TCCGCCATACCCAACGATTCGGACCTCACTCTGTACCTGGTGGTGGCGGTGGCCGCGGTC
TCCTGCGTCTTCCTGGCCTTCGTCATCGTGTTGCTGGCGCACAGGCTGCGGCGCTGGCAC
AAGTCACGCCTGCTGCAGGCTTCAGGAGGCAGCTTGACAGGCATGCAGAGCTCGCACTTT
GTGGGCGTGGACGGGGTTCGGGCTTTCCTGCAGACCTATTCCCACGAGGTCTCCCTCACT
GCGGACTCGCGGAAGAGCCACCTGATTTTCCCCCAGCCCAACTATGCGGACACGCTCATC
AGCCAGGAGAGCTGTGAGAAAAAGGATTTTTTATCAGCGCCTCAATCTCTACTCGAAGAA
GAAAGAGAAGAAACGTTTTCTCAGCAAGCCCCGCCCAACACGGACTGGCGTTTCTCTCAG
GCCCAGAGACCCGGCACCAGCGGCTCCCAAAATGGCGATGACACCGGCACCTGGCCCAAC
AACCAGTTTGACACAGAGATGCTGCAAGCCATGATCTTGGCGTCCGCCAGTGAAGCTGCT
GATGGGAGCTCCACCCTGGGAGGGGGTGCCGGCACCATGGGATTGAGCGCCCGCTACGGA
CCCCAGTTCACCCTGCAGCACGTGCCCGACTACCGCCAGAATGTCTACATCCCAGGCAGC
AATGCCACACTGACCAACGCAGCTGGCAAGCGGGATGGCAAGGCCCCAGCAGGTGGCAAT
GGCAACAAGAAGAAGTCGGGCAAGAAGGAGAAGAAGTAA
Protein Properties
Number of Residues 932
Molecular Weight 101483.3
Theoretical pI 4.61
Pfam Domain Function
Signals
  • 1-28
Transmembrane Regions
  • 693-713
Protein Sequence
>Protocadherin gamma-A2
MAALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALA
EQGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVE
VEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSL
DVRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAP
VFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGE
LTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDS
LPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNI
TLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPD
SNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNP
PLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
NAWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTL
TVAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWH
KSRLLQASGGSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI
SQESCEKKDFLSAPQSLLEEEREETFSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
GenBank ID Protein 5456934
UniProtKB/Swiss-Prot ID Q9Y5H1
UniProtKB/Swiss-Prot Entry Name PCDG2_HUMAN
PDB IDs Not Available
GenBank Gene ID AF152322
GeneCard ID PCDHGA2
GenAtlas ID PCDHGA2
HGNC ID HGNC:8700
References
General References
  1. Gerhard DS, Wagner L, Feingold EA, Shenmen CM, Grouse LH, Schuler G, Klein SL, Old S, Rasooly R, Good P, Guyer M, Peck AM, Derge JG, Lipman D, Collins FS, Jang W, Sherry S, Feolo M, Misquitta L, Lee E, Rotmistrovsky K, Greenhut SF, Schaefer CF, Buetow K, Bonner TI, Haussler D, Kent J, Kiekhaus M, Furey T, Brent M, Prange C, Schreiber K, Shapiro N, Bhat NK, Hopkins RF, Hsie F, Driscoll T, Soares MB, Casavant TL, Scheetz TE, Brown-stein MJ, Usdin TB, Toshiyuki S, Carninci P, Piao Y, Dudekula DB, Ko MS, Kawakami K, Suzuki Y, Sugano S, Gruber CE, Smith MR, Simmons B, Moore T, Waterman R, Johnson SL, Ruan Y, Wei CL, Mathavan S, Gunaratne PH, Wu J, Garcia AM, Hulyk SW, Fuh E, Yuan Y, Sneed A, Kowis C, Hodgson A, Muzny DM, McPherson J, Gibbs RA, Fahey J, Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M, Madari A, Young AC, Wetherby KD, Granite SJ, Kwong PN, Brinkley CP, Pearson RL, Bouffard GG, Blakesly RW, Green ED, Dickson MC, Rodriguez AC, Grimwood J, Schmutz J, Myers RM, Butterfield YS, Griffith M, Griffith OL, Krzywinski MI, Liao N, Morin R, Palmquist D, Petrescu AS, Skalska U, Smailus DE, Stott JM, Schnerch A, Schein JE, Jones SJ, Holt RA, Baross A, Marra MA, Clifton S, Makowski KA, Bosak S, Malek J: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). Genome Res. 2004 Oct;14(10B):2121-7. [PubMed:15489334 ]
  2. Wu Q, Maniatis T: A striking organization of a large family of human neural cadherin-like cell adhesion genes. Cell. 1999 Jun 11;97(6):779-90. [PubMed:10380929 ]