Hmdb loader
Survey
Identification
HMDB Protein ID HMDBP07914
Secondary Accession Numbers
  • 13625
Name Protocadherin gamma-A5
Synonyms
  1. PCDH-gamma-A5
Gene Name PCDHGA5
Protein Type Unknown
Biological Properties
General Function Involved in calcium ion binding
Specific Function Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain
Pathways Not Available
Reactions Not Available
GO Classification
Component
membrane
cell part
plasma membrane
Function
ion binding
cation binding
metal ion binding
binding
calcium ion binding
Process
cell adhesion
cellular process
cell-cell adhesion
homophilic cell adhesion
Cellular Location
  1. Cell membrane
  2. Single-pass type I membrane protein
Gene Properties
Chromosome Location Chromosome:5
Locus 5q31
SNPs PCDHGA5
Gene Sequence
>2796 bp
ATGGCGAGTCCACCTAGGGGCTGGGGCTGCGGAGAGCTGCTGCTGCCCTTCATGCTCCTG
GGGACGCTGTGCGAGCCAGGATCCGGGCAGATCCGCTACTCGATGCCGGAGGAGCTGGAC
AAAGGCTCCTTCGTCGGCAACATAGCCAAGGACCTTGGGCTGGAGCCCCAGGAGCTGGCG
GAGCGCGGAGTCCGCATCGTCTCCAGAGGTAGGACGCAGCTTTTTGCCCTGAACCCGCGA
AGCGGCAGCTTGGTCACCGCGGGCAGGATAGACCGGGAGGAGCTCTGCGCTCAGAGCCCA
CTGTGTGTGGTGAACTTTAACATCTTGGTTGAGAACAAAATGAAAATTTATGGAGTAGAA
GTAGAAATAATCGATATTAATGATAACTTCCCGCGTTTCCGGGATGAAGAGTTAAAAGTA
AAAGTTAATGAAAATGCGGCTGCAGGGACACGGTTAGTGCTTCCCTTCGCGCGGGATGCG
GATGTGGGTGTGAACTCTCTCCGGAGTTACCAGCTCAGCTCCAATCTGCACTTCTCTCTG
GATGTGGTAAGCGGAACTGATGGACAAAAGTATCCGGAGCTGGTGTTGGAACAGCCCCTA
GACCGCGAGAAAGAGACTGTTCACGACCTCCTCCTCACAGCTTTAGATGGCGGAGACCCG
GTACTCTCCGGCACCACGCACATCCGTGTTACGGTCCTCGACGCAAACGACAATGCGCCC
CTGTTCACCCCATCCGAGTACAGCGTGAGTGTTCCAGAGAACATACCTGTGGGCACTCGG
CTGCTCATGCTAACCGCCACGGATCCAGATGAGGGAATAAACGGGAAATTGACCTACTCT
TTTCGCAATGAAGAAGAAAAAATTTCGGAGACTTTCCAACTTGATTCCAACCTGGGGGAA
ATCTCAACTCTACAATCACTGGACTATGAAGAATCCAGATTCTACCTCATGGAAGTGGTA
GCTCAGGATGGAGGCGCTCTTGTTGCCAGCGCTAAGGTGGTGGTCACAGTACAGGACGTG
AATGACAATGCCCCCGAAGTGATCCTCACCTCTCTGACCAGTTCGATCTCTGAAGACTGT
CTTCCCGGAACTGTAATCGCGCTGTTTAGCGTACATGATGGTGATTCTGGAGAAAATGGT
GAGATTGCATGCTCTATTCCTAGGAATTTGCCTTTTAAATTGGAGAAGTCAGTTGATAAT
TACTATCACCTATTAACAACTAGGGACCTGGACAGAGAAGAGACTTCAGATTATAATATC
ACTTTAACCGTCATGGACCATGGAACCCCGCCCCTCTCTACAGAAAGCCACATCCCCTTG
AAAGTAGCAGACGTTAATGACAACCCACCCAATTTCCCTCAAGCCTCCTACTCCACCTCT
GTCACAGAAAACAATCCCAGAGGTGTCTCTATCTTCTCTGTGACAGCCCATGACCCCGAC
AGCGGCGACAACGCTCGAGTCACCTACTCCCTGGCTGAAGACACATTTCAGGGGGCGCCC
TTGTCCTCCTATGTATCCATTAACTCTGACACCGGTGTCCTGTATGCTCTGAGATCCTTC
GACTATGAGCAGTTGAGAGACCTACAGTTGTGGGTGACAGCCAGCGACAGTGGGAACCCT
CCACTTAGCAGCAACGTGTCGCTGAGCCTGTTTGTGCTGGACCAGAACGACAATACGCCT
GAGATCCTGTACCCCGCCCTCCCCACAGACGGTTCCACGGGCGTGGAGCTGGCGCCTCGC
TCCGCAGAACCTGGCTACCTGGTGACCAAGGTGGTAGCGGTGGACAAAGATTCAGGCCAG
AACGCCTGGCTGTCCTACCGCCTGCTTAAGGCCAGCGAGCCAGGACTCTTTGCGGTTGGG
CTGCACACGGGCGAGGTGCGCACAGCGCGAGCCCTGCTGGACAGAGACGCGCTCAAGCAG
AGCCTCGTGGTGGCCGTCGAAGACCATGGCCAGCCCCCTCTGTCAGCCACCTTCACGGTC
ACCGTTGCCGTGGCCGACAGGATCCCTGACATCCTGGCTGACCTAGGCAGTATCAAGACC
CCCATTGACCCTGAGGATCTGGACCTCACACTCTATCTTGTGGTGGCAGTGGCTGCAGTC
TCCTGCGTCTTCCTGGCCTTCGTCATCGTGCTGCTGGTGCTCAGACTGAGGCGCTGGCAC
AAGTCACGCCTGCTTCAGGCTGAAGGCAGCAGGTTGGCGGGTGTGCCCGCCTCGCACTTT
GTGGGCGTGGATGGGGTTCGGGCTTTCCTGCAGACCTATTCCCACGAGGTCTCCCTCACC
GCGGACTCGAGGAAGAGTCACCTGATCTTTCCCCAGCCCAACTACGCAGACACGCTCCTT
AGTGAAGAGAGCTGTGAGAAAAGCGAGCCTCTTCTGATGTCTGATAAGGTAGATGCAAAC
AAAGAAGAACGGCGAGTTCAGCAAGCCCCGCCCAACACGGACTGGCGTTTCTCTCAGGCC
CAGAGACCCGGCACCAGCGGCTCCCAAAATGGCGATGACACCGGCACCTGGCCCAACAAC
CAGTTTGACACAGAGATGCTGCAAGCCATGATCTTGGCGTCCGCCAGTGAAGCTGCTGAT
GGGAGCTCCACCCTGGGAGGGGGTGCCGGCACCATGGGATTGAGCGCCCGCTACGGACCC
CAGTTCACCCTGCAGCACGTGCCCGACTACCGCCAGAATGTCTACATCCCAGGCAGCAAT
GCCACACTGACCAACGCAGCTGGCAAGCGGGATGGCAAGGCCCCAGCAGGTGGCAATGGC
AACAAGAAGAAGTCGGGCAAGAAGGAGAAGAAGTAA
Protein Properties
Number of Residues 931
Molecular Weight 100934.1
Theoretical pI 4.47
Pfam Domain Function
Signals
  • 1-29
Transmembrane Regions
  • 693-713
Protein Sequence
>Protocadherin gamma-A5
MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA
ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE
VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL
DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP
LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE
ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC
LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI
TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD
SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP
PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ
NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV
TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH
KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL
SEESCEKSEPLLMSDKVDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNN
QFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN
ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
GenBank ID Protein 5456942
UniProtKB/Swiss-Prot ID Q9Y5G8
UniProtKB/Swiss-Prot Entry Name PCDG5_HUMAN
PDB IDs Not Available
GenBank Gene ID AF152325
GeneCard ID PCDHGA5
GenAtlas ID PCDHGA5
HGNC ID HGNC:8703
References
General References
  1. Gerhard DS, Wagner L, Feingold EA, Shenmen CM, Grouse LH, Schuler G, Klein SL, Old S, Rasooly R, Good P, Guyer M, Peck AM, Derge JG, Lipman D, Collins FS, Jang W, Sherry S, Feolo M, Misquitta L, Lee E, Rotmistrovsky K, Greenhut SF, Schaefer CF, Buetow K, Bonner TI, Haussler D, Kent J, Kiekhaus M, Furey T, Brent M, Prange C, Schreiber K, Shapiro N, Bhat NK, Hopkins RF, Hsie F, Driscoll T, Soares MB, Casavant TL, Scheetz TE, Brown-stein MJ, Usdin TB, Toshiyuki S, Carninci P, Piao Y, Dudekula DB, Ko MS, Kawakami K, Suzuki Y, Sugano S, Gruber CE, Smith MR, Simmons B, Moore T, Waterman R, Johnson SL, Ruan Y, Wei CL, Mathavan S, Gunaratne PH, Wu J, Garcia AM, Hulyk SW, Fuh E, Yuan Y, Sneed A, Kowis C, Hodgson A, Muzny DM, McPherson J, Gibbs RA, Fahey J, Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M, Madari A, Young AC, Wetherby KD, Granite SJ, Kwong PN, Brinkley CP, Pearson RL, Bouffard GG, Blakesly RW, Green ED, Dickson MC, Rodriguez AC, Grimwood J, Schmutz J, Myers RM, Butterfield YS, Griffith M, Griffith OL, Krzywinski MI, Liao N, Morin R, Palmquist D, Petrescu AS, Skalska U, Smailus DE, Stott JM, Schnerch A, Schein JE, Jones SJ, Holt RA, Baross A, Marra MA, Clifton S, Makowski KA, Bosak S, Malek J: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). Genome Res. 2004 Oct;14(10B):2121-7. [PubMed:15489334 ]
  2. Wu Q, Maniatis T: A striking organization of a large family of human neural cadherin-like cell adhesion genes. Cell. 1999 Jun 11;97(6):779-90. [PubMed:10380929 ]