Showing Protein Protocadherin gamma-B1 (HMDBP07922)

• 13633

1. PCDH-gamma-B1

1. Cell membrane
2. Single-pass type I membrane protein

>2784 bp
ATGCAGAGAGCCAGAGAAGCCGAAATGATGAAAAGTCAGGTACTGTTTCCCTTCCTGCTG
TCTTTGTTCTGCGGGGCCATCTCCCAGCAGATCCGATACACGATTCCAGAGGAGCTAGCC
AACGGCTCACGGGTGGGGAAACTTGCCAAGGATCTGGGGCTCAGTGTCCGGGAGTTGCCA
ACTCGAAAACTGCGGGTTAGTGCAGAGGATTATTTCAACGTTAGTTTGGAGAGCGGGGAT
TTGTTAGTGAACGGTAGGATAGATCGAGAGAAGATTTGCGGAAGGAAACTTGAGTGTGCA
CTAGAATTCGAAACGGTCGCTGAAAACCCAATGAATGTTTTCCACGTGGTTGTTGTAATC
CAAGATATTAATGACAATGCACCACGTTTCGTTGCAAAAGGCATTGACTTAGAAATTTGT
GAGTCAGCCTTACCCGGGGTAAAATTCTCTCTGGATTCTGCTCAAGATGCAGATGTGGAA
GGCAATTCACTGAAGTTATACACCATCAACCCCAATCAATACTTCTCTCTGTCAACGAAG
GAAAGTCCTGATGGAAGTAAATATCCGGTATTACTGCTGGAAAAACCTCTAGACAGGGAA
CATCAGAGCTCTCATCGCTTAATCCTGACTGCCATGGATGGCGGGGACCCGCCTCTAAGC
GGCACCACCCATATCTGGATCCGAGTTACGGATGCCAATGATAATGCTCCCGTGTTTAGC
CAGGAGGTATACAGGGTTAGCCTCCAAGAAAACGTACCGTGGGGAACCTCCGTGCTGCGG
GTGATGGCCACAGACCAGGATGAGGGCATTAATGCAGAGATCACCTATGCCTTCCTCAAT
TCCCCAATAAGTACCAGCCTCTTCAATCTCAATCCAAATACTGGCGACATCACAACCAAT
GGCACATTGGATTTTGAAGAGACAAGTAGATATGTGTTGAGTGTGGAAGCTAAGGATGGA
GGAGTACACACAGCTCACTGTAATGTTCAAATAGAAATTGTTGACGAGAATGACAATGCC
CCAGAGGTGACATTCATGTCCTTCTCTAACCAGATTCCAGAGGATTCAGACCTTGGAACT
GTAATAGCCCTCATAAAAGTGCGAGACAAGGATTCTGGGCAAAATGGCATGGTGACATGC
TATACTCAGGAAGAAGTTCCTTTCAAATTAGAATCCACCTCGAAGAATTATTACAAGCTG
GTGATTGCTGGAGCCCTAAACCGGGAGCAGACAGCAGACTACAACGTCACAATCATAGCC
ACCGACAAGGGCAAACCAGCCCTTTCCTCCAGGACAAGCATCACCCTGCACATCTCCGAC
ATCAACGACAATGCACCTGTTTTCCATCAGGCCTCCTATGTGGTCCACGTGTCTGAGAAC
AACCCACCTGGCGCCTCCATTGCACAAGTAAGCGCCTCCGACCCGGATTTGGGACCCAAC
GGCAGAGTCTCCTACTCTATTCTGGCCAGTGACCTGGAGCCGCGGGAGCTGTTGTCCTAC
GTGTCCGTGAGCCCGCAGAGCGGGGTGGTGTTCGCGCAGCGCGCCTTCGACCACGAGCAG
CTGCGCGCCTTCGAGCTCACACTGCAGGCCAGGGACCAGGGCTCCCCCGCGCTCAGCGCC
AACGTGAGCCTGCGCGTGTTGGTGGGCGACCTCAATGACAATGCGCCACGGGTGCTGTAC
CCCGCGCTGGGGCCTGATGGCTCCGCCCTCTTCGATATGGTGCCACGCGCCGCAGAGCCC
GGCTACCTGGTGACCAAGGTGGTGGCGGTGGACGCAGACTCAGGACACAACGCTTGGCTG
TCCTACCACGTGCTGCAGGCCAGCGAGCCCGGGCTCTTCAGCCTGGGGTTGCGCACGGGT
GAGGTGCGCACAGCGCGTGCCTTGGGCGACAGGGACGCGGCCCGCCAGCGCCTGCTGGTC
GCTGTGCGTGATGGAGGACAGCCGCCACTCTCCGCCACCGCCACGCTGCACCTAATCTTC
GCGGATAGCCTGCAAGAGGTATTGCCAGACCTCAGCGACCGCCCTGAGCCCTCTGACCCC
CAGACGGAACTGCAGTTTTACCTGGTTGTGGCCTTGGCCTTGATCTCAGTGCTCTTTCTC
CTCGCGGTGATTCTAGCGATCGCCCTGCGCCTGCGACGTTCCTCCAGCCTCGACACTGAG
GGCTGCTTTCAAACCGGTCTCTGCTCCAAGTCTGGGCCCGGGGTTCCTCCCAACCACAGC
GAGGGGACTTTGCCCTATTCCTACAATCTATGTATTGCCTCTCATTCTGCAAAGACAGAG
TTTAATTCTCTCAACCTGACACCGGAAATGGCTCCCCCTCAGGATCTGCTGTGTGATGAT
CCTTCTATGGTTGTATGTGCCAGTAATGAAGATCACAAAATCGCTTATGACCCTTCTTTG
TCTTCGCACCAAGCCCCGCCCAACACGGACTGGCGTTTCTCTCAGGCCCAGAGACCCGGC
ACCAGCGGCTCCCAAAATGGCGATGACACCGGCACCTGGCCCAACAACCAGTTTGACACA
GAGATGCTGCAAGCCATGATCTTGGCGTCCGCCAGTGAAGCTGCTGATGGGAGCTCCACC
CTGGGAGGGGGTGCCGGCACCATGGGATTGAGCGCCCGCTACGGACCCCAGTTCACCCTG
CAGCACGTGCCCGACTACCGCCAGAATGTCTACATCCCAGGCAGCAATGCCACACTGACC
AACGCAGCTGGCAAGCGGGATGGCAAGGCCCCAGCAGGTGGCAATGGCAACAAGAAGAAG
TCGGGCAAGAAGGAGAAGAAGTAA

• Cadherin (PF00028 )
• Cadherin_2 (PF08266 )

• 1-28

• 688-708

>Protocadherin gamma-B1
MQRAREAEMMKSQVLFPFLLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELP
TRKLRVSAEDYFNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVI
QDINDNAPRFVAKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTK
ESPDGSKYPVLLLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFS
QEVYRVSLQENVPWGTSVLRVMATDQDEGINAEITYAFLNSPISTSLFNLNPNTGDITTN
GTLDFEETSRYVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGT
VIALIKVRDKDSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIA
TDKGKPALSSRTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPN
GRVSYSILASDLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSA
NVSLRVLVGDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWL
SYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIF
ADSLQEVLPDLSDRPEPSDPQTELQFYLVVALALISVLFLLAVILAIALRLRRSSSLDTE
GCFQTGLCSKSGPGVPPNHSEGTLPYSYNLCIASHSAKTEFNSLNLTPEMAPPQDLLCDD
PSMVVCASNEDHKIAYDPSLSSHQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDT
EMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLT
NAAGKRDGKAPAGGNGNKKKSGKKEKK

1. Gerhard DS, Wagner L, Feingold EA, Shenmen CM, Grouse LH, Schuler G, Klein SL, Old S, Rasooly R, Good P, Guyer M, Peck AM, Derge JG, Lipman D, Collins FS, Jang W, Sherry S, Feolo M, Misquitta L, Lee E, Rotmistrovsky K, Greenhut SF, Schaefer CF, Buetow K, Bonner TI, Haussler D, Kent J, Kiekhaus M, Furey T, Brent M, Prange C, Schreiber K, Shapiro N, Bhat NK, Hopkins RF, Hsie F, Driscoll T, Soares MB, Casavant TL, Scheetz TE, Brown-stein MJ, Usdin TB, Toshiyuki S, Carninci P, Piao Y, Dudekula DB, Ko MS, Kawakami K, Suzuki Y, Sugano S, Gruber CE, Smith MR, Simmons B, Moore T, Waterman R, Johnson SL, Ruan Y, Wei CL, Mathavan S, Gunaratne PH, Wu J, Garcia AM, Hulyk SW, Fuh E, Yuan Y, Sneed A, Kowis C, Hodgson A, Muzny DM, McPherson J, Gibbs RA, Fahey J, Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M, Madari A, Young AC, Wetherby KD, Granite SJ, Kwong PN, Brinkley CP, Pearson RL, Bouffard GG, Blakesly RW, Green ED, Dickson MC, Rodriguez AC, Grimwood J, Schmutz J, Myers RM, Butterfield YS, Griffith M, Griffith OL, Krzywinski MI, Liao N, Morin R, Palmquist D, Petrescu AS, Skalska U, Smailus DE, Stott JM, Schnerch A, Schein JE, Jones SJ, Holt RA, Baross A, Marra MA, Clifton S, Makowski KA, Bosak S, Malek J: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). Genome Res. 2004 Oct;14(10B):2121-7. [PubMed:15489334 ]
2. Wu Q, Maniatis T: A striking organization of a large family of human neural cadherin-like cell adhesion genes. Cell. 1999 Jun 11;97(6):779-90. [PubMed:10380929 ]