Hmdb loader
Survey
Identification
HMDB Protein ID HMDBP10904
Secondary Accession Numbers
  • 17204
Name Sushi domain-containing protein 5
Synonyms Not Available
Gene Name SUSD5
Protein Type Unknown
Biological Properties
General Function Involved in binding
Specific Function Not Available
Pathways Not Available
Reactions Not Available
GO Classification
Function
binding
pattern binding
polysaccharide binding
glycosaminoglycan binding
hyaluronic acid binding
Process
cell adhesion
cellular process
Cellular Location
  1. Membrane
  2. Single-pass type I membrane protein
Gene Properties
Chromosome Location Chromosome:3
Locus 3p22.3
SNPs SUSD5
Gene Sequence
>1890 bp
ATGACTGCCGAGGGACCCAGCCCGCCTGCCCGTTGGCACAGACGCCTCCCCGGGCTCTGG
GCGGCGGCGCTGCTCCTGCTCGGTCTGCCGCGCCTTTCGGTGCGGGCGGATGGAAAGTTC
TTTGTGCTGGAGTCTCAGAATGGCTCTCAGGGCCTACAACTGGAGGCTGCTCGGCTTTCC
TGCAAGAGCAGGGGCGCTCACCTGGCATCTGCAGACGAGCTGCGGAGAGTGGTACAGGAT
TGCTCCTTTGCGGTGTGCACCACTGGCTGGCTAGCAGATGGTACTCTTGGAACAACTGTG
TGTAGCAAAGGAAGTGGAGAACAGCAAATCATGAGAGCTGTCGATGTGAGAATTGAGAGC
AACCCAGTTCCTGGTGGCACATACAGTGCCCTTTGTATTAAGGATGAAGAGAAGCCGTGT
GGAGACCCGCCTTCGTTCCCACACACCATCCTGCAGGGCCGCACCGGCTTGGAAATGGGG
GATGAACTGCTGTACGTGTGTGCCCCAGGCCACATCATGGGCCACCGGGAGACCGCCTTC
ACCTTGCTATGTAACAGCTGTGGGGAGTGGTACGGCCTGGTGCAGGCCTGTGGGAAAGAT
GAGGCTGAGGCACACATTGACTATGAAGATAACTTCCCTGATGACAGATCTGTGTCATTC
AGAGAGCTCATGGAGGATTCCCGGACAGAGGCAGATGAGGACAGGGGTCAGGGAGACTCC
TCTGAGGAGGCTCCAAAACAGGACCGTCTGGTCTCCATTTCTGTGGGGAGAGAAAACATA
GCCCGGGATAAAGTCTTTGTGCCAACCACAGGCTTGCCTGGTGCTGGGAGCAGTGTCCCC
GCAGATTCACCAGGATCACGGCTGCTCCAGAAGCACTTGTTCTGGTTTCCTGCTGAGGCT
TTCCACAAGCCTGGGTTGGAAAAGGAGGTGGATGATGACACCAAAAAGCAGTTTTCTGCT
GGAGACAACCACAGTGGTGTAAAATTGGTCCCAGGTGAACCTGAAACCAAGGTGATCTAC
GGCAACACTGATGGTCCCTCGGGGCCATTTGTGGGCAAGAATGACAGCAAGGCAGGAGAT
CCAGTGGTGAGCAGCAGTGATGAGTCCTGGTTAGATGGCTACCCTGTGACAGAGGGGGCT
TGGAGGAAGACAGAGGCAGAAGAGGAAGAAGATGGGGACAGAGGGGATGGGTCAGTAGGG
CTGGATGAAAACGTCCTAGTTACTCCTGATCAGCCCATTCTTGTGGAAGTTAAGAAGCCC
AAGAGTAGCACCCTCACACCAAGCGAGGGCATGACCCATAGTTCAGTTCTTCCATCTCAA
ATGCTAGATGTGGAAGCTTTGGCGCTCAGACCCGTGAATGCTTCCGAGACTGAGGGCATT
GGGGATGGTGACTTGACGAAGTACCAGTCAACTCTACCCTGGAGATTCATCACAGAGGAA
TCTCCCATGGCCACCCTGTCCTATGAGCTCACCAGCTCCACCCTGGAGATATTAACAGTG
AACACTGTCAAGCAGACACCTAACCACATCCCCTCAACGATCATGGCAACCACCCAGCCT
CCAGTAGAAACCACTGTTCCTGAGATCCAGGATAGCTTCCCATACCTGCTGTCTGAAGAC
TTCTTTGGACAGGAAGGCCCCGGGCCAGGTGCAAGTGAGGAGCTTCATCCCACCTTGGAG
TCGTGTGTGGGGGACGGATGTCCTGGCCTCAGCAGAGGCCCTGTGATCGCCACCATTGTC
ACCGTCCTGTGCCTACTGCTGCTCCTGGCAGGTGTGGGGATGGTGTGGGGCTACCGCAAG
TGCCAGCACAAGAGCTCTGTGTACAAGCTGAATGTTGGCCAGCGGCAGGCTCGGCACTAC
CACCAGCAGATCGAGATGGAGAAGGTCTAG
Protein Properties
Number of Residues 629
Molecular Weight 68020.6
Theoretical pI 4.53
Pfam Domain Function
Signals
  • 1-35
Transmembrane Regions
  • 575-595
Protein Sequence
>Sushi domain-containing protein 5
MTAEGPSPPARWHRRLPGLWAAALLLLGLPRLSVRADGKFFVLESQNGSQGLQLEAARLS
CKSRGAHLASADELRRVVQDCSFAVCTTGWLADGTLGTTVCSKGSGEQQIMRAVDVRIES
NPVPGGTYSALCIKDEEKPCGDPPSFPHTILQGRTGLEMGDELLYVCAPGHIMGHRETAF
TLLCNSCGEWYGLVQACGKDEAEAHIDYEDNFPDDRSVSFRELMEDSRTEADEDRGQGDS
SEEAPKQDRLVSISVGRENIARDKVFVPTTGLPGAGSSVPADSPGSRLLQKHLFWFPAEA
FHKPGLEKEVDDDTKKQFSAGDNHSGVKLVPGEPETKVIYGNTDGPSGPFVGKNDSKAGD
PVVSSSDESWLDGYPVTEGAWRKTEAEEEEDGDRGDGSVGLDENVLVTPDQPILVEVKKP
KSSTLTPSEGMTHSSVLPSQMLDVEALALRPVNASETEGIGDGDLTKYQSTLPWRFITEE
SPMATLSYELTSSTLEILTVNTVKQTPNHIPSTIMATTQPPVETTVPEIQDSFPYLLSED
FFGQEGPGPGASEELHPTLESCVGDGCPGLSRGPVIATIVTVLCLLLLLAGVGMVWGYRK
CQHKSSVYKLNVGQRQARHYHQQIEMEKV
GenBank ID Protein 150378552
UniProtKB/Swiss-Prot ID O60279
UniProtKB/Swiss-Prot Entry Name SUSD5_HUMAN
PDB IDs Not Available
GenBank Gene ID NM_015551.1
GeneCard ID SUSD5
GenAtlas ID SUSD5
HGNC ID HGNC:29061
References
General References
  1. Muzny DM, Scherer SE, Kaul R, Wang J, Yu J, Sudbrak R, Buhay CJ, Chen R, Cree A, Ding Y, Dugan-Rocha S, Gill R, Gunaratne P, Harris RA, Hawes AC, Hernandez J, Hodgson AV, Hume J, Jackson A, Khan ZM, Kovar-Smith C, Lewis LR, Lozado RJ, Metzker ML, Milosavljevic A, Miner GR, Morgan MB, Nazareth LV, Scott G, Sodergren E, Song XZ, Steffen D, Wei S, Wheeler DA, Wright MW, Worley KC, Yuan Y, Zhang Z, Adams CQ, Ansari-Lari MA, Ayele M, Brown MJ, Chen G, Chen Z, Clendenning J, Clerc-Blankenburg KP, Chen R, Chen Z, Davis C, Delgado O, Dinh HH, Dong W, Draper H, Ernst S, Fu G, Gonzalez-Garay ML, Garcia DK, Gillett W, Gu J, Hao B, Haugen E, Havlak P, He X, Hennig S, Hu S, Huang W, Jackson LR, Jacob LS, Kelly SH, Kube M, Levy R, Li Z, Liu B, Liu J, Liu W, Lu J, Maheshwari M, Nguyen BV, Okwuonu GO, Palmeiri A, Pasternak S, Perez LM, Phelps KA, Plopper FJ, Qiang B, Raymond C, Rodriguez R, Saenphimmachak C, Santibanez J, Shen H, Shen Y, Subramanian S, Tabor PE, Verduzco D, Waldron L, Wang J, Wang J, Wang Q, Williams GA, Wong GK, Yao Z, Zhang J, Zhang X, Zhao G, Zhou J, Zhou Y, Nelson D, Lehrach H, Reinhardt R, Naylor SL, Yang H, Olson M, Weinstock G, Gibbs RA: The DNA sequence, annotation and analysis of human chromosome 3. Nature. 2006 Apr 27;440(7088):1194-8. [PubMed:16641997 ]
  2. Nagase T, Ishikawa K, Miyajima N, Tanaka A, Kotani H, Nomura N, Ohara O: Prediction of the coding sequences of unidentified human genes. IX. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro. DNA Res. 1998 Feb 28;5(1):31-9. [PubMed:9628581 ]