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Identification
HMDB Protein ID HMDBP11473
Secondary Accession Numbers
  • 17822
Name ALS2 C-terminal-like protein
Synonyms Not Available
Gene Name ALS2CL
Protein Type Unknown
Biological Properties
General Function Involved in Rho guanyl-nucleotide exchange factor activity
Specific Function Acts as a guanine nucleotide exchange factor (GEF) for Rab5 GTPase. Regulates the ALS2-mediated endosome dynamics
Pathways Not Available
Reactions Not Available
GO Classification Not Available
Cellular Location
  1. Cytoplasm
Gene Properties
Chromosome Location Chromosome:3
Locus 3p21.31
SNPs ALS2CL
Gene Sequence
>2862 bp
ATGTGCAACCCTGAGGAGGCAGCTCTGCTGCGGCTGGAGGAGGTCTTCTCAGCCACCCTC
GCCCATGTCAACAGCCTTGTCCTCCAGCCCCTGCTCCCAGCCGCCCCAGATCCCTCGGAT
CCCTGGGGCAGAGAGTGCCTGCGGCTCTTGCAACAGCTGCACAAGAGCTCCCAGCAACTC
TGGGAGGTGACGGAGGAAAGCCTGCACTCACTGCAGGAGAGGCTGCGTTACCCGGACTCC
ACCGGTCTGGAGTCCCTGCTGCTGCTGCGAGGTGCTGACCGTGTACTGCAGGCCCACATA
GAGTACATTGAGTCCTACACAAGCTGCATGGTGGTGCAGGCCTTCCAGAAGGCAGCAAAG
AGGAGAAGCGAGTACTGGCGGGGCCAGCGGAAGGCGCTGCGGCAGCTGCTTTCAGGTGTG
AGCTCAGAGGGCTCGGTGGGCGCATCGCTGGGCCAGGCCCTCCACCAGCCACTCGCCCAT
CACGTGCAACAGTACGTGCTCCTCCTGCTGAGCCTCGGGGACACCATTGGGGAGCATCAC
CCAACCCGGGAGCTGGTGGTGAACGCAGTCACCCTCTTTGGGAACCTGCAGTCCTTCATG
AAGCAGGAGTTGGACCAGGCTGTGGCCACACAGGCTCTCTGGCACACCCTGAGAGGCCGG
CTGAGGGATGTGCTCTGCACCCCTGCTCACAGACTCCTTCAGGACAGCCAGGACGTACCC
GTGACGGTCGCACCGTTGCGGGCTGAGCGTGTGCTGCTCTTTGATGATGCCCTCGTCCTG
CTGCAGGGCCACAATGTCCACACCTTTGATCTGAAGCTGGTGTGGGTGGATCCTGGGCAG
GACGGGTGCACGTTTCACCTCCTCACGCCCGAAGAAGAGTTCTCCTTTTGTGCCAAGGAC
TCCCAGGGCCAGGCAGTCTGGCAGTGGAAGGTGACCTGGGCTGTTCACCAGGCCCTGCAT
GGGAAGAAGGACTTCCCCGTGCTGGGGGCTGGCCTGGAGCCCTCCCAGCCTCCCGACTGC
CGCTGCGCAGAATATACCTTCCAGGCAGAGGGCCGGCTCTGCCAGGCCACCTACGAGGGC
GAGTGGTGCAGGGGCCGGCCCCACGGCAAGGGAACCCTGAAATGGCCGGATGGGCGGAAT
CATGTGGGGAATTTCTGCCAGGGCCTGGAGCATGGCTTCGGCATCCGCCTGCTGCCCCAG
GCCTCTGAGGACAAGTTCGACTGTTACAAGTGTCACTGGCGAGAAGGCAGCATGTGTGGC
TACGGCATCTGTGAGTACAGCACCGACGAGGTGTACAAGGGCTACTTCCAGGAGGGCCTG
CGGCACGGATTTGGGGTCCTTGAGAGTGGTCCGCAGGCCCCCCAGCCCTTCAGGTACACG
GGCCACTGGGAGAGGGGCCAGAGGAGCGGCTATGGCATTGAGGAGGATGGTGACAGAGGT
GAGCGCTACATTGGCATGTGGCAGGCTGGTCAGCGCCACGGCCCAGGGGTCATGGTCACC
CAGGCAGGTGTCTGCTACCAGGGCACCTTCCAGGCGGACAAGACGGTGGGCCCGGGCATC
CTCCTCTCTGAAGACGACTCCCTGTATGAGGGCACCTTCACCAGGGACCTGACCCTCATG
GGGAAGGGCAAGGTCACCTTCCCCAATGGCTTCACCCTGGAGGGCTCGTTCGGCAGTGGG
GCAGGGAGAGGACTGCACACACAGGGTGTGCTGGACACGGCTGCCCTCCCACCAGACCCG
AGCAGTACCTGCAAGAGGCAGCTGGGCGTGGGTGCCTTCCCCGTGGAAAGCCGCTGGCAG
GGAGTCTACAGCCCCTTCCGGGACTTTGTGTGTGCTGGCTGCCCCAGGGACCTGCAGGAG
GCCCTGCTGGGCTTCGACGTGCAGAGCTCCAGGGAGCTGCGTAGGTCTCAGGATTACCTG
TCCTGCGAGAGGACCCACCCTGAGGACAGTGTGGGCAGTATGGAAGACATCCTGGAGGAG
CTGCTGCAGCACCGGGAGCCCAAGGCCCTGCAGCTGTACCTCAGGAAGGCTCTGAGCAAC
TCACTGCACCCCCTGGGAAAGCTGCTCCGGACACTGATGCTGACCTTCCAGGCTACCTAC
GCAGGTGTCGGGGCCAACAAGCACCTGCAGGAGCTGGCCCAGGAGGAGGTGAAGCAGCAT
GCCCAGGAACTCTGGGCTGCCTACAGGGGTCTGCTGCGAGTTGCCTTAGAGCGCAAGGGC
CAGGCCCTGGAGGAGGATGAAGACACAGAGACAAGGGACCTCCAGGTGCATGGATTGGTG
CTGCCCCTCATGCTGCCCAGCTTCTACTCAGAGCTCTTCACGCTCTACCTGCTGCTTCAT
GAGCGGGAGGACAGCTTCTACAGCCAGGGCATTGCCAACTTGAGCCTCTTTCCTGATACC
CAACTGCTCGAGTTCCTGGATGTGCAGAAGCACTTGTGGCCCCTCAAGGACCTCACGCTG
ACGAGCAATCAGAGGTACTCCCTGGTCAGGGACAAGTGTTTCCTGTCAGCCACCGAGTGC
CTGCAGAAGATCATGACCACGGTGGACCCACGGGAGAAGCTGGAGGTGCTGGAGAGGACA
TACGGGGAAATTGAGGGCACGGTGTCGAGGGTATTGGGCCGGGAGTACAAGCTGCCCATG
GACGACCTGCTGCCACTTCTCATCTACGTGGTGTCGCGCGCCCGAATTCAGCACCTGGGA
GCCGAGATCCACCTGATCCGTGACATGATGGACCCCAACCACACAGGAGGCCTGTATGAC
TTCCTGCTCACAGCCCTGGAGTCCTGTTACGAGCACATCCAGAAAGAAGACATGAGGCTG
CACCGCTTACCTGGCCACTGGCACTCCAGGGAGCTCTGGTAG
Protein Properties
Number of Residues 953
Molecular Weight 107747.5
Theoretical pI 6.09
Pfam Domain Function
Signals
  • None
Transmembrane Regions
  • None
Protein Sequence
>ALS2 C-terminal-like protein
MCNPEEAALLRLEEVFSATLAHVNSLVLQPLLPAAPDPSDPWGRECLRLLQQLHKSSQQL
WEVTEESLHSLQERLRYPDSTGLESLLLLRGADRVLQAHIEYIESYTSCMVVQAFQKAAK
RRSEYWRGQRKALRQLLSGVSSEGSVGASLGQALHQPLAHHVQQYVLLLLSLGDTIGEHH
PTRELVVNAVTLFGNLQSFMKQELDQAVATQALWHTLRGRLRDVLCTPAHRLLQDSQDVP
VTVAPLRAERVLLFDDALVLLQGHNVHTFDLKLVWVDPGQDGCTFHLLTPEEEFSFCAKD
SQGQAVWQWKVTWAVHQALHGKKDFPVLGAGLEPSQPPDCRCAEYTFQAEGRLCQATYEG
EWCRGRPHGKGTLKWPDGRNHVGNFCQGLEHGFGIRLLPQASEDKFDCYKCHWREGSMCG
YGICEYSTDEVYKGYFQEGLRHGFGVLESGPQAPQPFRYTGHWERGQRSGYGIEEDGDRG
ERYIGMWQAGQRHGPGVMVTQAGVCYQGTFQADKTVGPGILLSEDDSLYEGTFTRDLTLM
GKGKVTFPNGFTLEGSFGSGAGRGLHTQGVLDTAALPPDPSSTCKRQLGVGAFPVESRWQ
GVYSPFRDFVCAGCPRDLQEALLGFDVQSSRELRRSQDYLSCERTHPEDSVGSMEDILEE
LLQHREPKALQLYLRKALSNSLHPLGKLLRTLMLTFQATYAGVGANKHLQELAQEEVKQH
AQELWAAYRGLLRVALERKGQALEEDEDTETRDLQVHGLVLPLMLPSFYSELFTLYLLLH
EREDSFYSQGIANLSLFPDTQLLEFLDVQKHLWPLKDLTLTSNQRYSLVRDKCFLSATEC
LQKIMTTVDPREKLEVLERTYGEIEGTVSRVLGREYKLPMDDLLPLLIYVVSRARIQHLG
AEIHLIRDMMDPNHTGGLYDFLLTALESCYEHIQKEDMRLHRLPGHWHSRELW
GenBank ID Protein 52693642
UniProtKB/Swiss-Prot ID Q60I27
UniProtKB/Swiss-Prot Entry Name AL2CL_HUMAN
PDB IDs Not Available
GenBank Gene ID AB107015
GeneCard ID ALS2CL
GenAtlas ID ALS2CL
HGNC ID HGNC:20605
References
General References
  1. Ota T, Suzuki Y, Nishikawa T, Otsuki T, Sugiyama T, Irie R, Wakamatsu A, Hayashi K, Sato H, Nagai K, Kimura K, Makita H, Sekine M, Obayashi M, Nishi T, Shibahara T, Tanaka T, Ishii S, Yamamoto J, Saito K, Kawai Y, Isono Y, Nakamura Y, Nagahari K, Murakami K, Yasuda T, Iwayanagi T, Wagatsuma M, Shiratori A, Sudo H, Hosoiri T, Kaku Y, Kodaira H, Kondo H, Sugawara M, Takahashi M, Kanda K, Yokoi T, Furuya T, Kikkawa E, Omura Y, Abe K, Kamihara K, Katsuta N, Sato K, Tanikawa M, Yamazaki M, Ninomiya K, Ishibashi T, Yamashita H, Murakawa K, Fujimori K, Tanai H, Kimata M, Watanabe M, Hiraoka S, Chiba Y, Ishida S, Ono Y, Takiguchi S, Watanabe S, Yosida M, Hotuta T, Kusano J, Kanehori K, Takahashi-Fujii A, Hara H, Tanase TO, Nomura Y, Togiya S, Komai F, Hara R, Takeuchi K, Arita M, Imose N, Musashino K, Yuuki H, Oshima A, Sasaki N, Aotsuka S, Yoshikawa Y, Matsunawa H, Ichihara T, Shiohata N, Sano S, Moriya S, Momiyama H, Satoh N, Takami S, Terashima Y, Suzuki O, Nakagawa S, Senoh A, Mizoguchi H, Goto Y, Shimizu F, Wakebe H, Hishigaki H, Watanabe T, Sugiyama A, Takemoto M, Kawakami B, Yamazaki M, Watanabe K, Kumagai A, Itakura S, Fukuzumi Y, Fujimori Y, Komiyama M, Tashiro H, Tanigami A, Fujiwara T, Ono T, Yamada K, Fujii Y, Ozaki K, Hirao M, Ohmori Y, Kawabata A, Hikiji T, Kobatake N, Inagaki H, Ikema Y, Okamoto S, Okitani R, Kawakami T, Noguchi S, Itoh T, Shigeta K, Senba T, Matsumura K, Nakajima Y, Mizuno T, Morinaga M, Sasaki M, Togashi T, Oyama M, Hata H, Watanabe M, Komatsu T, Mizushima-Sugano J, Satoh T, Shirai Y, Takahashi Y, Nakagawa K, Okumura K, Nagase T, Nomura N, Kikuchi H, Masuho Y, Yamashita R, Nakai K, Yada T, Nakamura Y, Ohara O, Isogai T, Sugano S: Complete sequencing and characterization of 21,243 full-length human cDNAs. Nat Genet. 2004 Jan;36(1):40-5. Epub 2003 Dec 21. [PubMed:14702039 ]
  2. Gerhard DS, Wagner L, Feingold EA, Shenmen CM, Grouse LH, Schuler G, Klein SL, Old S, Rasooly R, Good P, Guyer M, Peck AM, Derge JG, Lipman D, Collins FS, Jang W, Sherry S, Feolo M, Misquitta L, Lee E, Rotmistrovsky K, Greenhut SF, Schaefer CF, Buetow K, Bonner TI, Haussler D, Kent J, Kiekhaus M, Furey T, Brent M, Prange C, Schreiber K, Shapiro N, Bhat NK, Hopkins RF, Hsie F, Driscoll T, Soares MB, Casavant TL, Scheetz TE, Brown-stein MJ, Usdin TB, Toshiyuki S, Carninci P, Piao Y, Dudekula DB, Ko MS, Kawakami K, Suzuki Y, Sugano S, Gruber CE, Smith MR, Simmons B, Moore T, Waterman R, Johnson SL, Ruan Y, Wei CL, Mathavan S, Gunaratne PH, Wu J, Garcia AM, Hulyk SW, Fuh E, Yuan Y, Sneed A, Kowis C, Hodgson A, Muzny DM, McPherson J, Gibbs RA, Fahey J, Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M, Madari A, Young AC, Wetherby KD, Granite SJ, Kwong PN, Brinkley CP, Pearson RL, Bouffard GG, Blakesly RW, Green ED, Dickson MC, Rodriguez AC, Grimwood J, Schmutz J, Myers RM, Butterfield YS, Griffith M, Griffith OL, Krzywinski MI, Liao N, Morin R, Palmquist D, Petrescu AS, Skalska U, Smailus DE, Stott JM, Schnerch A, Schein JE, Jones SJ, Holt RA, Baross A, Marra MA, Clifton S, Makowski KA, Bosak S, Malek J: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). Genome Res. 2004 Oct;14(10B):2121-7. [PubMed:15489334 ]
  3. Bechtel S, Rosenfelder H, Duda A, Schmidt CP, Ernst U, Wellenreuther R, Mehrle A, Schuster C, Bahr A, Blocker H, Heubner D, Hoerlein A, Michel G, Wedler H, Kohrer K, Ottenwalder B, Poustka A, Wiemann S, Schupp I: The full-ORF clone resource of the German cDNA Consortium. BMC Genomics. 2007 Oct 31;8:399. [PubMed:17974005 ]
  4. Sjoblom T, Jones S, Wood LD, Parsons DW, Lin J, Barber TD, Mandelker D, Leary RJ, Ptak J, Silliman N, Szabo S, Buckhaults P, Farrell C, Meeh P, Markowitz SD, Willis J, Dawson D, Willson JK, Gazdar AF, Hartigan J, Wu L, Liu C, Parmigiani G, Park BH, Bachman KE, Papadopoulos N, Vogelstein B, Kinzler KW, Velculescu VE: The consensus coding sequences of human breast and colorectal cancers. Science. 2006 Oct 13;314(5797):268-74. Epub 2006 Sep 7. [PubMed:16959974 ]
  5. Hadano S, Otomo A, Suzuki-Utsunomiya K, Kunita R, Yanagisawa Y, Showguchi-Miyata J, Mizumura H, Ikeda JE: ALS2CL, the novel protein highly homologous to the carboxy-terminal half of ALS2, binds to Rab5 and modulates endosome dynamics. FEBS Lett. 2004 Sep 24;575(1-3):64-70. [PubMed:15388334 ]
  6. Hadano S, Ikeda JE: Purification and functional analyses of ALS2 and its homologue. Methods Enzymol. 2005;403:310-21. [PubMed:16473597 ]
  7. Suzuki-Utsunomiya K, Hadano S, Otomo A, Kunita R, Mizumura H, Osuga H, Ikeda JE: ALS2CL, a novel ALS2-interactor, modulates ALS2-mediated endosome dynamics. Biochem Biophys Res Commun. 2007 Mar 9;354(2):491-7. Epub 2007 Jan 11. [PubMed:17239822 ]